RNA–Protein interactions for RNA: ENST00000355973.7

GABBR1-201, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 2 BASIC

Gene GABBR1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-201ENST00000355973 NISCHQ9Y2I1 1504 aa25.89■■□□□ 1.73
GABBR1-201ENST00000355973 CCDC180Q9P1Z9 1646 aa22.51■■□□□ 1.19
GABBR1-201ENST00000355973 DCAF8L2P0C7V8 631 aa21.99■■□□□ 1.11
GABBR1-201ENST00000355973 ABCC9O60706 1549 aa21.87■■□□□ 1.09
GABBR1-201ENST00000355973 ZCCHC6Q5VYS8 1495 aaKnown RBP21.67■■□□□ 1.06
GABBR1-201ENST00000355973 SHROOM4Q9ULL8 1493 aa21.38■■□□□ 1.01
GABBR1-201ENST00000355973 DCAF1Q9Y4B6 1507 aa21.23■□□□□ 0.99
GABBR1-201ENST00000355973 NACADO15069 1562 aa21.11■□□□□ 0.97
GABBR1-201ENST00000355973 RB1CC1Q8TDY2 1594 aa21.04■□□□□ 0.96
GABBR1-201ENST00000355973 MYO15BQ96JP2 1530 aa21.03■□□□□ 0.96
GABBR1-201ENST00000355973 SCRIBQ14160 1630 aa20.95■□□□□ 0.94
GABBR1-201ENST00000355973 PABPN1Q86U42 306 aaKnown RBP eCLIP20.69■□□□□ 0.9
GABBR1-201ENST00000355973 SUPT5HO00267 1087 aaKnown RBP20.5■□□□□ 0.87
GABBR1-201ENST00000355973 UNC13AQ9UPW8 1703 aa20.49■□□□□ 0.87
GABBR1-201ENST00000355973 BICRAQ9NZM4 1560 aa20.34■□□□□ 0.85
GABBR1-201ENST00000355973 CECR2Q9BXF3 1484 aa20.24■□□□□ 0.83
GABBR1-201ENST00000355973 RSF1Q96T23 1441 aaPredicted RBP20.06■□□□□ 0.8
GABBR1-201ENST00000355973 MROH2BQ7Z745 1585 aa20.05■□□□□ 0.8
GABBR1-201ENST00000355973 BAZ1AQ9NRL2 1556 aaPredicted RBP20.02■□□□□ 0.79
GABBR1-201ENST00000355973 PELP1Q8IZL8 1130 aaKnown RBP19.96■□□□□ 0.79
GABBR1-201ENST00000355973 SMARCA4P51532 1647 aa19.93■□□□□ 0.78
GABBR1-201ENST00000355973 WIZO95785 1651 aa19.87■□□□□ 0.77
GABBR1-201ENST00000355973 EIF4G1Q04637 1599 aaKnown RBP19.83■□□□□ 0.77
GABBR1-201ENST00000355973 ATAD2BQ9ULI0 1458 aa19.71■□□□□ 0.75
GABBR1-201ENST00000355973 BAZ1BQ9UIG0 1483 aaKnown RBP19.66■□□□□ 0.74
GABBR1-201ENST00000355973 SMARCA2P51531 1590 aa19.66■□□□□ 0.74
GABBR1-201ENST00000355973 CC2D2AQ9P2K1 1620 aa19.61■□□□□ 0.73
GABBR1-201ENST00000355973 TOP2AP11388 1531 aaKnown RBP19.6■□□□□ 0.73
GABBR1-201ENST00000355973 PEG3Q9GZU2 1588 aa19.56■□□□□ 0.72
GABBR1-201ENST00000355973 CHIC1Q5VXU3 224 aa19.55■□□□□ 0.72
GABBR1-201ENST00000355973 NCAPD3P42695 1498 aa19.52■□□□□ 0.71
GABBR1-201ENST00000355973 CCDC88BA6NC98 1476 aa19.47■□□□□ 0.71
GABBR1-201ENST00000355973 DNAJC5BQ9UF47 199 aa19.47■□□□□ 0.71
GABBR1-201ENST00000355973 HMGXB3Q12766 1538 aa19.42■□□□□ 0.7
GABBR1-201ENST00000355973 HRCP23327 699 aa19.42■□□□□ 0.7
GABBR1-201ENST00000355973 MYT1Q01538 1121 aa19.37■□□□□ 0.69
GABBR1-201ENST00000355973 PPARGC1BQ86YN6 1023 aaKnown RBP19.31■□□□□ 0.68
GABBR1-201ENST00000355973 TRIM41Q8WV44 630 aa19.19■□□□□ 0.66
GABBR1-201ENST00000355973 CADPSQ9ULU8 1353 aa19.11■□□□□ 0.65
GABBR1-201ENST00000355973 NESP48681 1621 aa19.07■□□□□ 0.64
GABBR1-201ENST00000355973 ABCC8Q09428 1581 aa19.07■□□□□ 0.64
GABBR1-201ENST00000355973 CFTRP13569 1480 aa19.05■□□□□ 0.64
GABBR1-201ENST00000355973 SCAF1Q9H7N4 1312 aaKnown RBP19.04■□□□□ 0.64
GABBR1-201ENST00000355973 FAM9AQ8IZU1 332 aaPredicted RBP19■□□□□ 0.63
GABBR1-201ENST00000355973 WRNQ14191 1432 aaPredicted RBP eCLIP18.96■□□□□ 0.63
GABBR1-201ENST00000355973 LOC105371045A0A1W2PR82 267 aa18.93■□□□□ 0.62
GABBR1-201ENST00000355973 FANCD2Q9BXW9 1451 aa18.91■□□□□ 0.62
GABBR1-201ENST00000355973 EHMT2Q96KQ7 1210 aa18.89■□□□□ 0.61
GABBR1-201ENST00000355973 LAMC3Q9Y6N6 1575 aa18.88■□□□□ 0.61
GABBR1-201ENST00000355973 PDS5BQ9NTI5 1447 aa18.87■□□□□ 0.61
GABBR1-201ENST00000355973 PCGF6Q9BYE7 350 aa18.83■□□□□ 0.6
GABBR1-201ENST00000355973 CEP164Q9UPV0 1460 aa18.82■□□□□ 0.6
GABBR1-201ENST00000355973 SYNJ1O43426 1573 aa18.8■□□□□ 0.6
GABBR1-201ENST00000355973 ERCC6Q03468 1493 aa18.8■□□□□ 0.6
GABBR1-201ENST00000355973 PRDM2Q13029 1718 aa18.76■□□□□ 0.59
GABBR1-201ENST00000355973 CUX1P39880 1505 aa18.74■□□□□ 0.59
GABBR1-201ENST00000355973 KIF21AQ7Z4S6 1674 aa18.7■□□□□ 0.58
GABBR1-201ENST00000355973 SOGA1O94964 1423 aa18.69■□□□□ 0.58
GABBR1-201ENST00000355973 TOP2BQ02880 1626 aa18.68■□□□□ 0.58
GABBR1-201ENST00000355973 TOPBP1Q92547 1522 aa18.64■□□□□ 0.58
GABBR1-201ENST00000355973 FGD5Q6ZNL6 1462 aa18.64■□□□□ 0.57
GABBR1-201ENST00000355973 URB2Q14146 1524 aaKnown RBP18.64■□□□□ 0.57
GABBR1-201ENST00000355973 RUSC2Q8N2Y8 1516 aa18.61■□□□□ 0.57
GABBR1-201ENST00000355973 DNMBPQ6XZF7 1577 aa18.6■□□□□ 0.57
GABBR1-201ENST00000355973 BIVM-ERCC5R4GMW8 1640 aa18.6■□□□□ 0.57
GABBR1-201ENST00000355973 MRC2Q9UBG0 1479 aa18.6■□□□□ 0.57
GABBR1-201ENST00000355973 RAD54L2Q9Y4B4 1467 aa18.57■□□□□ 0.56
GABBR1-201ENST00000355973 PRKCSHP14314 528 aaPredicted RBP18.57■□□□□ 0.56
GABBR1-201ENST00000355973 CSRNP3Q8WYN3 585 aa18.57■□□□□ 0.56
GABBR1-201ENST00000355973 POLA1P09884 1462 aaPredicted RBP18.55■□□□□ 0.56
GABBR1-201ENST00000355973 CUX2O14529 1486 aa18.54■□□□□ 0.56
GABBR1-201ENST00000355973 KIF27Q86VH2 1401 aa18.5■□□□□ 0.55
GABBR1-201ENST00000355973 UBTFP17480 764 aaKnown RBP18.49■□□□□ 0.55
GABBR1-201ENST00000355973 TDRD9Q8NDG6 1382 aaKnown RBP18.48■□□□□ 0.55
GABBR1-201ENST00000355973 EEA1Q15075 1411 aa18.47■□□□□ 0.55
GABBR1-201ENST00000355973 RANGAP1P46060 587 aaPredicted RBP18.43■□□□□ 0.54
GABBR1-201ENST00000355973 WDR62O43379 1518 aa18.41■□□□□ 0.54
GABBR1-201ENST00000355973 THOC2Q8NI27 1593 aaKnown RBP18.39■□□□□ 0.54
GABBR1-201ENST00000355973 BCL11AQ9H165 835 aa18.39■□□□□ 0.53
GABBR1-201ENST00000355973 ABCA10Q8WWZ4 1543 aa18.37■□□□□ 0.53
GABBR1-201ENST00000355973 TTBK1Q5TCY1 1321 aaPredicted RBP18.36■□□□□ 0.53
GABBR1-201ENST00000355973 AQRO60306 1485 aaKnown RBP eCLIP18.35■□□□□ 0.539e-7■■■■■ 29.9
GABBR1-201ENST00000355973 IFT140Q96RY7 1462 aa18.32■□□□□ 0.52
GABBR1-201ENST00000355973 IGF1RP08069 1367 aa18.32■□□□□ 0.52
GABBR1-201ENST00000355973 GAPVD1Q14C86 1478 aa18.32■□□□□ 0.52
GABBR1-201ENST00000355973 ZNF608Q9ULD9 1512 aaPredicted RBP18.31■□□□□ 0.52
GABBR1-201ENST00000355973 GOLGA3Q08378 1498 aa18.29■□□□□ 0.52
GABBR1-201ENST00000355973 CARMIL1Q5VZK9 1371 aa18.29■□□□□ 0.52
GABBR1-201ENST00000355973 RAPGEF2Q9Y4G8 1499 aa18.29■□□□□ 0.52
GABBR1-201ENST00000355973 TARBP1Q13395 1621 aaKnown RBP18.27■□□□□ 0.52
GABBR1-201ENST00000355973 FBLN2P98095 1184 aa18.27■□□□□ 0.52
GABBR1-201ENST00000355973 TRIM26Q12899 539 aaPredicted RBP18.24■□□□□ 0.51
GABBR1-201ENST00000355973 GTF3C3Q9Y5Q9 886 aa18.23■□□□□ 0.51
GABBR1-201ENST00000355973 TNIKQ9UKE5 1360 aa18.22■□□□□ 0.51
GABBR1-201ENST00000355973 PRXQ9BXM0 1461 aa18.21■□□□□ 0.51
GABBR1-201ENST00000355973 NEUROD1Q13562 356 aa18.2■□□□□ 0.5
GABBR1-201ENST00000355973 WDR97A6NE52 1622 aa18.2■□□□□ 0.5
GABBR1-201ENST00000355973 CEP162Q5TB80 1403 aa18.2■□□□□ 0.5
GABBR1-201ENST00000355973 KIF21BO75037 1637 aa18.19■□□□□ 0.5
GABBR1-201ENST00000355973 ABCA5Q8WWZ7 1642 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms