Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV20-1A0A075B6N2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC14.66□□□□□ -0.06
TRBV20-1A0A075B6N2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV20-1A0A075B6N2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV20-1A0A075B6N2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
TRBV20-1A0A075B6N2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
TRBV20-1A0A075B6N2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC14.65□□□□□ -0.06
TRBV20-1A0A075B6N2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV20-1A0A075B6N2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV20-1A0A075B6N2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV20-1A0A075B6N2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV20-1A0A075B6N2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV20-1A0A075B6N2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TRBV20-1A0A075B6N2 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV20-1A0A075B6N2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC14.65□□□□□ -0.06
TRBV20-1A0A075B6N2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV20-1A0A075B6N2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TRBV20-1A0A075B6N2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV20-1A0A075B6N2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV20-1A0A075B6N2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV20-1A0A075B6N2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TRBV20-1A0A075B6N2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV20-1A0A075B6N2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
TRBV20-1A0A075B6N2 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TRBV20-1A0A075B6N2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV20-1A0A075B6N2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
TRBV20-1A0A075B6N2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.07
TRBV20-1A0A075B6N2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV20-1A0A075B6N2 AC010542.4-201ENST00000563151 1910 ntBASIC14.64□□□□□ -0.07
TRBV20-1A0A075B6N2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV20-1A0A075B6N2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
TRBV20-1A0A075B6N2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
TRBV20-1A0A075B6N2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV20-1A0A075B6N2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV20-1A0A075B6N2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV20-1A0A075B6N2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TRBV20-1A0A075B6N2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV20-1A0A075B6N2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC14.64□□□□□ -0.07
TRBV20-1A0A075B6N2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBV20-1A0A075B6N2 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRBV20-1A0A075B6N2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV20-1A0A075B6N2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV20-1A0A075B6N2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRBV20-1A0A075B6N2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV20-1A0A075B6N2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV20-1A0A075B6N2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBV20-1A0A075B6N2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV20-1A0A075B6N2 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBV20-1A0A075B6N2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
TRBV20-1A0A075B6N2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV20-1A0A075B6N2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV20-1A0A075B6N2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV20-1A0A075B6N2 AC110285.7-201ENST00000624417 1536 ntBASIC14.63□□□□□ -0.07
TRBV20-1A0A075B6N2 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
TRBV20-1A0A075B6N2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC14.63□□□□□ -0.07
TRBV20-1A0A075B6N2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV20-1A0A075B6N2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBV20-1A0A075B6N2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV20-1A0A075B6N2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV20-1A0A075B6N2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV20-1A0A075B6N2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV20-1A0A075B6N2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBV20-1A0A075B6N2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.62□□□□□ -0.07
TRBV20-1A0A075B6N2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
TRBV20-1A0A075B6N2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV20-1A0A075B6N2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC14.62□□□□□ -0.07
TRBV20-1A0A075B6N2 AL158211.5-201ENST00000623583 2518 ntBASIC14.62□□□□□ -0.07
TRBV20-1A0A075B6N2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV20-1A0A075B6N2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV20-1A0A075B6N2 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC14.62□□□□□ -0.07
TRBV20-1A0A075B6N2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV20-1A0A075B6N2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV20-1A0A075B6N2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TRBV20-1A0A075B6N2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV20-1A0A075B6N2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV20-1A0A075B6N2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC14.62□□□□□ -0.07
TRBV20-1A0A075B6N2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
TRBV20-1A0A075B6N2 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV20-1A0A075B6N2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC14.62□□□□□ -0.07
TRBV20-1A0A075B6N2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC14.62□□□□□ -0.07
TRBV20-1A0A075B6N2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV20-1A0A075B6N2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV20-1A0A075B6N2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV20-1A0A075B6N2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC14.62□□□□□ -0.07
TRBV20-1A0A075B6N2 AC079630.1-202ENST00000618127 1840 ntBASIC14.62□□□□□ -0.07
TRBV20-1A0A075B6N2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC14.61□□□□□ -0.07
TRBV20-1A0A075B6N2 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV20-1A0A075B6N2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV20-1A0A075B6N2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV20-1A0A075B6N2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV20-1A0A075B6N2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV20-1A0A075B6N2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV20-1A0A075B6N2 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV20-1A0A075B6N2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV20-1A0A075B6N2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV20-1A0A075B6N2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV20-1A0A075B6N2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV20-1A0A075B6N2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV20-1A0A075B6N2 LINC01006-201ENST00000333319 2292 ntBASIC14.61□□□□□ -0.07
TRBV20-1A0A075B6N2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms