Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 MICAL2-201ENST00000256194 3906 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 ERBB2-203ENST00000445658 3238 ntTSL 2 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 HDAC7-230ENST00000552960 3216 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 LINC02052-202ENST00000427914 2285 ntTSL 2 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 IQCK-202ENST00000320394 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 ABCC8-201ENST00000302539 4923 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 SLC18A1-201ENST00000265808 2770 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 HYLS1-201ENST00000356438 1810 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 OLFML2A-201ENST00000288815 5964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 TMEM184B-201ENST00000361684 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 LOX-201ENST00000231004 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 ETV5-201ENST00000306376 4111 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 SPRY2-202ENST00000377104 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 CCT7P1-201ENST00000406551 1611 ntBASIC10.51□□□□□ -0.73
RAB40CQ96S21 NOS3-203ENST00000461406 3644 ntTSL 2 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 AC008966.1-201ENST00000502171 2367 ntTSL 2 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 PAAF1-214ENST00000544552 1612 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 C6orf163-203ENST00000608326 2110 ntTSL 2 BASIC10.51□□□□□ -0.73
RAB40CQ96S21 PNMA5-201ENST00000361887 3197 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
RAB40CQ96S21 ALS2CL-201ENST00000318962 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 SFPQ-201ENST00000357214 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 TNIP1-218ENST00000523338 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 PKN2-203ENST00000370521 6121 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 IL17REL-201ENST00000341280 3500 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
RAB40CQ96S21 SLIT2-201ENST00000273739 5132 ntTSL 5 BASIC10.5□□□□□ -0.73
RAB40CQ96S21 UBE2V1-207ENST00000420027 1956 ntTSL 5 BASIC10.5□□□□□ -0.73
RAB40CQ96S21 PES1-203ENST00000402281 2760 ntTSL 2 BASIC10.5□□□□□ -0.73
RAB40CQ96S21 AC245884.11-201ENST00000616950 1734 ntTSL 3 BASIC10.5□□□□□ -0.73
RAB40CQ96S21 AACS-201ENST00000316519 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC10.5□□□□□ -0.73
RAB40CQ96S21 ALOXE3-201ENST00000318227 3053 ntTSL 2 BASIC10.5□□□□□ -0.73
RAB40CQ96S21 TRIM46-201ENST00000334634 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 TESK2-202ENST00000372086 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 SLC27A6-203ENST00000506176 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 SLIT2-202ENST00000503823 5233 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 TNFSF13B-201ENST00000375887 2582 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 TMPRSS7-201ENST00000419127 2317 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 PARG-207ENST00000616448 3197 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 DEPDC1-201ENST00000370966 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC10.5□□□□□ -0.73
RAB40CQ96S21 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 ABCD1P4-201ENST00000399687 604 ntBASIC10.5□□□□□ -0.73
RAB40CQ96S21 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC10.5□□□□□ -0.73
RAB40CQ96S21 CMC1-204ENST00000423894 549 ntTSL 2 BASIC10.5□□□□□ -0.73
RAB40CQ96S21 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 AC099344.2-201ENST00000430897 1061 ntTSL 2 BASIC10.5□□□□□ -0.73
RAB40CQ96S21 AC026320.2-201ENST00000434379 478 ntBASIC10.5□□□□□ -0.73
RAB40CQ96S21 AC006335.1-201ENST00000445200 547 ntBASIC10.5□□□□□ -0.73
RAB40CQ96S21 GULOP-201ENST00000454030 748 ntBASIC10.5□□□□□ -0.73
RAB40CQ96S21 RN7SL11P-201ENST00000471305 293 ntBASIC10.5□□□□□ -0.73
RAB40CQ96S21 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC10.5□□□□□ -0.73
RAB40CQ96S21 HIST2H2BC-201ENST00000498492 580 ntBASIC10.5□□□□□ -0.73
RAB40CQ96S21 HNRNPA1P7-201ENST00000521273 963 ntBASIC10.5□□□□□ -0.73
RAB40CQ96S21 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC10.5□□□□□ -0.73
RAB40CQ96S21 RERG-205ENST00000537647 935 ntTSL 2 BASIC10.5□□□□□ -0.73
RAB40CQ96S21 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC10.5□□□□□ -0.73
RAB40CQ96S21 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC10.5□□□□□ -0.73
RAB40CQ96S21 ZFAND6-220ENST00000561060 891 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC10.5□□□□□ -0.73
RAB40CQ96S21 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC10.5□□□□□ -0.73
RAB40CQ96S21 METTL23-211ENST00000589977 617 ntTSL 3 BASIC10.5□□□□□ -0.73
RAB40CQ96S21 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
RAB40CQ96S21 AC007326.1-201ENST00000604539 458 ntBASIC10.5□□□□□ -0.73
RAB40CQ96S21 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC10.5□□□□□ -0.73
RAB40CQ96S21 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 AC137723.2-201ENST00000623540 398 ntBASIC10.5□□□□□ -0.73
RAB40CQ96S21 ST3GAL6-202ENST00000394162 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 NKIRAS2-205ENST00000393881 1598 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
RAB40CQ96S21 PLEKHG5-203ENST00000377728 3613 ntAPPRIS P3 TSL 2 BASIC10.5□□□□□ -0.73
RAB40CQ96S21 AL355388.2-201ENST00000610146 2157 ntTSL 4 BASIC10.5□□□□□ -0.73
RAB40CQ96S21 COG4-202ENST00000393612 2756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 AC116903.2-201ENST00000561674 1304 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 PTPN6-201ENST00000318974 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 C1S-221ENST00000617865 2844 ntTSL 5 BASIC10.5□□□□□ -0.73
RAB40CQ96S21 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
RAB40CQ96S21 NUP62-201ENST00000352066 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 ASB9-202ENST00000380485 1652 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 HS6ST2-202ENST00000370836 4441 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
RAB40CQ96S21 AFAP1L1-201ENST00000296721 4177 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 AC020915.2-201ENST00000591325 4227 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
RAB40CQ96S21 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 PCDHGB5-201ENST00000617380 4578 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
RAB40CQ96S21 PLEKHA6-205ENST00000637508 5704 ntTSL 5 BASIC10.49□□□□□ -0.73
RAB40CQ96S21 BCL2L13-207ENST00000418951 5062 ntTSL 3 BASIC10.49□□□□□ -0.73
RAB40CQ96S21 ANKDD1A-201ENST00000319580 3110 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
RAB40CQ96S21 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms