RNA–Protein interactions for RNA: ENST00000334634.8

TRIM46-201, Transcript of tripartite motif containing 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM46, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-201ENST00000334634 NISCHQ9Y2I1 1504 aa27.62■■■□□ 2.01
TRIM46-201ENST00000334634 DCAF8L2P0C7V8 631 aa23.68■■□□□ 1.38
TRIM46-201ENST00000334634 SHROOM4Q9ULL8 1493 aa23.68■■□□□ 1.38
TRIM46-201ENST00000334634 CCDC180Q9P1Z9 1646 aa23.47■■□□□ 1.35
TRIM46-201ENST00000334634 ZCCHC6Q5VYS8 1495 aaKnown RBP23.2■■□□□ 1.3
TRIM46-201ENST00000334634 SUPT5HO00267 1087 aaKnown RBP22.93■■□□□ 1.26
TRIM46-201ENST00000334634 ABCC9O60706 1549 aa22.81■■□□□ 1.24
TRIM46-201ENST00000334634 DCAF1Q9Y4B6 1507 aa22.39■■□□□ 1.17
TRIM46-201ENST00000334634 SCRIBQ14160 1630 aa22.34■■□□□ 1.17
TRIM46-201ENST00000334634 NACADO15069 1562 aa21.94■■□□□ 1.1
TRIM46-201ENST00000334634 MYO15BQ96JP2 1530 aa21.89■■□□□ 1.09
TRIM46-201ENST00000334634 PABPN1Q86U42 306 aaKnown RBP eCLIP21.88■■□□□ 1.09
TRIM46-201ENST00000334634 CECR2Q9BXF3 1484 aa21.83■■□□□ 1.09
TRIM46-201ENST00000334634 CHIC1Q5VXU3 224 aa21.79■■□□□ 1.08
TRIM46-201ENST00000334634 RB1CC1Q8TDY2 1594 aa21.77■■□□□ 1.08
TRIM46-201ENST00000334634 RSF1Q96T23 1441 aaPredicted RBP21.75■■□□□ 1.07
TRIM46-201ENST00000334634 MROH2BQ7Z745 1585 aa21.59■■□□□ 1.05
TRIM46-201ENST00000334634 UNC13AQ9UPW8 1703 aa21.5■■□□□ 1.03
TRIM46-201ENST00000334634 WIZO95785 1651 aa21.44■■□□□ 1.02
TRIM46-201ENST00000334634 EHMT2Q96KQ7 1210 aa21.37■■□□□ 1.01
TRIM46-201ENST00000334634 LOC105371045A0A1W2PR82 267 aa21.37■■□□□ 1.01
TRIM46-201ENST00000334634 BICRAQ9NZM4 1560 aa21.32■■□□□ 1
TRIM46-201ENST00000334634 FAM9AQ8IZU1 332 aaPredicted RBP21.3■■□□□ 1
TRIM46-201ENST00000334634 TRIM41Q8WV44 630 aa21.2■□□□□ 0.98
TRIM46-201ENST00000334634 BAZ1AQ9NRL2 1556 aaPredicted RBP21.19■□□□□ 0.98
TRIM46-201ENST00000334634 SMARCA4P51532 1647 aa21.13■□□□□ 0.97
TRIM46-201ENST00000334634 CCDC88BA6NC98 1476 aa20.98■□□□□ 0.95
TRIM46-201ENST00000334634 TOP2AP11388 1531 aaKnown RBP20.9■□□□□ 0.94
TRIM46-201ENST00000334634 ABCC8Q09428 1581 aa20.86■□□□□ 0.93
TRIM46-201ENST00000334634 SMARCA2P51531 1590 aa20.85■□□□□ 0.93
TRIM46-201ENST00000334634 ATAD2BQ9ULI0 1458 aa20.81■□□□□ 0.92
TRIM46-201ENST00000334634 BAZ1BQ9UIG0 1483 aaKnown RBP20.73■□□□□ 0.91
TRIM46-201ENST00000334634 PCGF6Q9BYE7 350 aa20.69■□□□□ 0.9
TRIM46-201ENST00000334634 EIF4G1Q04637 1599 aaKnown RBP20.67■□□□□ 0.9
TRIM46-201ENST00000334634 PPARGC1BQ86YN6 1023 aaKnown RBP20.63■□□□□ 0.89
TRIM46-201ENST00000334634 PEG3Q9GZU2 1588 aa20.58■□□□□ 0.89
TRIM46-201ENST00000334634 SOGA1O94964 1423 aa20.57■□□□□ 0.88
TRIM46-201ENST00000334634 RUSC2Q8N2Y8 1516 aa20.56■□□□□ 0.88
TRIM46-201ENST00000334634 DNAJC5BQ9UF47 199 aa20.51■□□□□ 0.87
TRIM46-201ENST00000334634 TTBK1Q5TCY1 1321 aaPredicted RBP20.46■□□□□ 0.87
TRIM46-201ENST00000334634 WRNQ14191 1432 aaPredicted RBP eCLIP20.43■□□□□ 0.86
TRIM46-201ENST00000334634 RANGAP1P46060 587 aaPredicted RBP20.43■□□□□ 0.86
TRIM46-201ENST00000334634 NCAPD3P42695 1498 aa20.41■□□□□ 0.86
TRIM46-201ENST00000334634 SYNJ1O43426 1573 aa20.37■□□□□ 0.85
TRIM46-201ENST00000334634 UBTFP17480 764 aaKnown RBP20.35■□□□□ 0.85
TRIM46-201ENST00000334634 CC2D2AQ9P2K1 1620 aa20.34■□□□□ 0.85
TRIM46-201ENST00000334634 CSRNP3Q8WYN3 585 aa20.33■□□□□ 0.84
TRIM46-201ENST00000334634 HRCP23327 699 aa20.25■□□□□ 0.83
TRIM46-201ENST00000334634 HMGXB3Q12766 1538 aa20.25■□□□□ 0.83
TRIM46-201ENST00000334634 NESP48681 1621 aa20.15■□□□□ 0.82
TRIM46-201ENST00000334634 TRIM26Q12899 539 aaPredicted RBP20.14■□□□□ 0.82
TRIM46-201ENST00000334634 CFTRP13569 1480 aa20.12■□□□□ 0.81
TRIM46-201ENST00000334634 CUX1P39880 1505 aa20.09■□□□□ 0.81
TRIM46-201ENST00000334634 CADPSQ9ULU8 1353 aa20.09■□□□□ 0.81
TRIM46-201ENST00000334634 CEP162Q5TB80 1403 aa20.07■□□□□ 0.8
TRIM46-201ENST00000334634 RAPGEF2Q9Y4G8 1499 aa20.03■□□□□ 0.8
TRIM46-201ENST00000334634 TOP2BQ02880 1626 aa20.01■□□□□ 0.79
TRIM46-201ENST00000334634 TNIKQ9UKE5 1360 aa19.97■□□□□ 0.79
TRIM46-201ENST00000334634 GOLGA3Q08378 1498 aa19.95■□□□□ 0.78
TRIM46-201ENST00000334634 EEA1Q15075 1411 aa19.94■□□□□ 0.78
TRIM46-201ENST00000334634 FANCD2Q9BXW9 1451 aa19.91■□□□□ 0.78
TRIM46-201ENST00000334634 BIVM-ERCC5R4GMW8 1640 aa19.87■□□□□ 0.77
TRIM46-201ENST00000334634 CEP164Q9UPV0 1460 aa19.87■□□□□ 0.77
TRIM46-201ENST00000334634 CUX2O14529 1486 aa19.86■□□□□ 0.77
TRIM46-201ENST00000334634 RAD54L2Q9Y4B4 1467 aa19.86■□□□□ 0.77
TRIM46-201ENST00000334634 FGD5Q6ZNL6 1462 aa19.85■□□□□ 0.77
TRIM46-201ENST00000334634 CLIP1P30622 1438 aa19.82■□□□□ 0.76
TRIM46-201ENST00000334634 KIF27Q86VH2 1401 aa19.8■□□□□ 0.76
TRIM46-201ENST00000334634 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.77■□□□□ 0.76
TRIM46-201ENST00000334634 P3H3Q8IVL6 736 aa19.77■□□□□ 0.75
TRIM46-201ENST00000334634 IGF1RP08069 1367 aa19.75■□□□□ 0.75
TRIM46-201ENST00000334634 KIF21BO75037 1637 aa19.74■□□□□ 0.75
TRIM46-201ENST00000334634 PRXQ9BXM0 1461 aa19.73■□□□□ 0.75
TRIM46-201ENST00000334634 TDRD9Q8NDG6 1382 aaKnown RBP19.72■□□□□ 0.75
TRIM46-201ENST00000334634 TOPBP1Q92547 1522 aa19.69■□□□□ 0.74
TRIM46-201ENST00000334634 URB2Q14146 1524 aaKnown RBP19.68■□□□□ 0.74
TRIM46-201ENST00000334634 POLA1P09884 1462 aaPredicted RBP19.68■□□□□ 0.74
TRIM46-201ENST00000334634 PRDM2Q13029 1718 aa19.67■□□□□ 0.74
TRIM46-201ENST00000334634 HNRNPUL2Q1KMD3 747 aaKnown RBP19.65■□□□□ 0.74
TRIM46-201ENST00000334634 CARMIL1Q5VZK9 1371 aa19.65■□□□□ 0.74
TRIM46-201ENST00000334634 ATP1B4Q9UN42 357 aaPredicted RBP19.62■□□□□ 0.73
TRIM46-201ENST00000334634 KANK4Q5T7N3 995 aaPredicted RBP19.61■□□□□ 0.73
TRIM46-201ENST00000334634 APLP2Q06481 763 aa19.61■□□□□ 0.73
TRIM46-201ENST00000334634 KIF21AQ7Z4S6 1674 aa19.58■□□□□ 0.73
TRIM46-201ENST00000334634 ARAP1Q96P48 1450 aa19.58■□□□□ 0.73
TRIM46-201ENST00000334634 VPS8Q8N3P4 1428 aa19.57■□□□□ 0.72
TRIM46-201ENST00000334634 PDS5BQ9NTI5 1447 aa19.57■□□□□ 0.72
TRIM46-201ENST00000334634 DNMBPQ6XZF7 1577 aa19.57■□□□□ 0.72
TRIM46-201ENST00000334634 LAMC3Q9Y6N6 1575 aa19.56■□□□□ 0.72
TRIM46-201ENST00000334634 CCER1Q8TC90 406 aaPredicted RBP19.53■□□□□ 0.72
TRIM46-201ENST00000334634 ERICH3Q5RHP9 1530 aa19.51■□□□□ 0.71
TRIM46-201ENST00000334634 ARHGAP35Q9NRY4 1499 aa19.49■□□□□ 0.71
TRIM46-201ENST00000334634 AQRO60306 1485 aaKnown RBP eCLIP19.47■□□□□ 0.71
TRIM46-201ENST00000334634 ITGAEP38570 1179 aa19.46■□□□□ 0.71
TRIM46-201ENST00000334634 ABCA10Q8WWZ4 1543 aa19.46■□□□□ 0.71
TRIM46-201ENST00000334634 ARID3CA6NKF2 412 aa19.41■□□□□ 0.7
TRIM46-201ENST00000334634 FHOD3Q2V2M9 1422 aa19.39■□□□□ 0.69
TRIM46-201ENST00000334634 GAPVD1Q14C86 1478 aa19.39■□□□□ 0.69
TRIM46-201ENST00000334634 ZNF608Q9ULD9 1512 aaPredicted RBP19.37■□□□□ 0.69
TRIM46-201ENST00000334634 ERCC6Q03468 1493 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms