RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 NISCHQ9Y2I1 1504 aa25.47■■□□□ 1.67
TNFSF13B-201ENST00000375887 SHROOM4Q9ULL8 1493 aa21.97■■□□□ 1.11
TNFSF13B-201ENST00000375887 ZCCHC6Q5VYS8 1495 aaKnown RBP21.55■■□□□ 1.04
TNFSF13B-201ENST00000375887 SUPT5HO00267 1087 aaKnown RBP21.55■■□□□ 1.04
TNFSF13B-201ENST00000375887 CCDC180Q9P1Z9 1646 aa21.48■■□□□ 1.03
TNFSF13B-201ENST00000375887 DCAF8L2P0C7V8 631 aa21.36■■□□□ 1.01
TNFSF13B-201ENST00000375887 CHIC1Q5VXU3 224 aa20.99■□□□□ 0.95
TNFSF13B-201ENST00000375887 MYO15BQ96JP2 1530 aa20.95■□□□□ 0.94
TNFSF13B-201ENST00000375887 DCAF1Q9Y4B6 1507 aa20.83■□□□□ 0.92
TNFSF13B-201ENST00000375887 HRCP23327 699 aa20.5■□□□□ 0.87
TNFSF13B-201ENST00000375887 PCGF6Q9BYE7 350 aa20.46■□□□□ 0.87
TNFSF13B-201ENST00000375887 LOC105371045A0A1W2PR82 267 aa20.44■□□□□ 0.86
TNFSF13B-201ENST00000375887 ABCC9O60706 1549 aa20.33■□□□□ 0.84
TNFSF13B-201ENST00000375887 SCRIBQ14160 1630 aa20.27■□□□□ 0.84
TNFSF13B-201ENST00000375887 RSF1Q96T23 1441 aaPredicted RBP20.26■□□□□ 0.83
TNFSF13B-201ENST00000375887 PPARGC1BQ86YN6 1023 aaKnown RBP20.16■□□□□ 0.82
TNFSF13B-201ENST00000375887 EHMT2Q96KQ7 1210 aa20.05■□□□□ 0.8
TNFSF13B-201ENST00000375887 RB1CC1Q8TDY2 1594 aa20.02■□□□□ 0.8
TNFSF13B-201ENST00000375887 FAM9AQ8IZU1 332 aaPredicted RBP20.01■□□□□ 0.79
TNFSF13B-201ENST00000375887 TRIM41Q8WV44 630 aa20.01■□□□□ 0.79
TNFSF13B-201ENST00000375887 TRIM26Q12899 539 aaPredicted RBP19.98■□□□□ 0.79
TNFSF13B-201ENST00000375887 CECR2Q9BXF3 1484 aa19.95■□□□□ 0.78
TNFSF13B-201ENST00000375887 NACADO15069 1562 aa19.88■□□□□ 0.77
TNFSF13B-201ENST00000375887 MROH2BQ7Z745 1585 aa19.85■□□□□ 0.77
TNFSF13B-201ENST00000375887 WIZO95785 1651 aa19.73■□□□□ 0.75
TNFSF13B-201ENST00000375887 BAZ1AQ9NRL2 1556 aaPredicted RBP19.54■□□□□ 0.72
TNFSF13B-201ENST00000375887 ZEB1P37275 1124 aaPredicted RBP19.51■□□□□ 0.71
TNFSF13B-201ENST00000375887 EIF4G1Q04637 1599 aaKnown RBP19.48■□□□□ 0.71
TNFSF13B-201ENST00000375887 TTBK1Q5TCY1 1321 aaPredicted RBP19.37■□□□□ 0.69
TNFSF13B-201ENST00000375887 CCDC88BA6NC98 1476 aa19.36■□□□□ 0.69
TNFSF13B-201ENST00000375887 TOP2AP11388 1531 aaKnown RBP19.36■□□□□ 0.69
TNFSF13B-201ENST00000375887 ABCC8Q09428 1581 aa19.36■□□□□ 0.69
TNFSF13B-201ENST00000375887 SMARCA4P51532 1647 aa19.35■□□□□ 0.69
TNFSF13B-201ENST00000375887 SMARCA2P51531 1590 aa19.3■□□□□ 0.68
TNFSF13B-201ENST00000375887 UNC13AQ9UPW8 1703 aa19.28■□□□□ 0.68
TNFSF13B-201ENST00000375887 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.24■□□□□ 0.67
TNFSF13B-201ENST00000375887 PABPN1Q86U42 306 aaKnown RBP eCLIP19.24■□□□□ 0.67
TNFSF13B-201ENST00000375887 SOGA1O94964 1423 aa19.23■□□□□ 0.67
TNFSF13B-201ENST00000375887 RUSC2Q8N2Y8 1516 aa19.15■□□□□ 0.66
TNFSF13B-201ENST00000375887 CEP162Q5TB80 1403 aa19.14■□□□□ 0.66
TNFSF13B-201ENST00000375887 PELP1Q8IZL8 1130 aaKnown RBP19.14■□□□□ 0.65
TNFSF13B-201ENST00000375887 CCER1Q8TC90 406 aaPredicted RBP19.13■□□□□ 0.65
TNFSF13B-201ENST00000375887 WRNQ14191 1432 aaPredicted RBP eCLIP19.12■□□□□ 0.65
TNFSF13B-201ENST00000375887 CSRNP3Q8WYN3 585 aa19.11■□□□□ 0.65
TNFSF13B-201ENST00000375887 TNIKQ9UKE5 1360 aa19.1■□□□□ 0.65
TNFSF13B-201ENST00000375887 BICRAQ9NZM4 1560 aa19.09■□□□□ 0.65
TNFSF13B-201ENST00000375887 UBTFP17480 764 aaKnown RBP19.05■□□□□ 0.64
TNFSF13B-201ENST00000375887 EEA1Q15075 1411 aa19.01■□□□□ 0.63
TNFSF13B-201ENST00000375887 SCAF1Q9H7N4 1312 aaKnown RBP19■□□□□ 0.63
TNFSF13B-201ENST00000375887 PEG3Q9GZU2 1588 aa18.95■□□□□ 0.62
TNFSF13B-201ENST00000375887 GOLGA3Q08378 1498 aa18.93■□□□□ 0.62
TNFSF13B-201ENST00000375887 RANGAP1P46060 587 aaPredicted RBP18.9■□□□□ 0.62
TNFSF13B-201ENST00000375887 SYNJ1O43426 1573 aa18.89■□□□□ 0.61
TNFSF13B-201ENST00000375887 ATAD2BQ9ULI0 1458 aa18.87■□□□□ 0.61
TNFSF13B-201ENST00000375887 DIEXFQ68CQ4 756 aaKnown RBP18.83■□□□□ 0.6
TNFSF13B-201ENST00000375887 CEP164Q9UPV0 1460 aa18.81■□□□□ 0.6
TNFSF13B-201ENST00000375887 BAZ1BQ9UIG0 1483 aaKnown RBP18.79■□□□□ 0.6
TNFSF13B-201ENST00000375887 CLIP1P30622 1438 aa18.76■□□□□ 0.59
TNFSF13B-201ENST00000375887 KIF21BO75037 1637 aa18.76■□□□□ 0.59
TNFSF13B-201ENST00000375887 NEUROD1Q13562 356 aa18.76■□□□□ 0.59
TNFSF13B-201ENST00000375887 ACIN1Q9UKV3 1341 aaKnown RBP18.73■□□□□ 0.59
TNFSF13B-201ENST00000375887 RAPGEF2Q9Y4G8 1499 aa18.73■□□□□ 0.59
TNFSF13B-201ENST00000375887 HNRNPUL2Q1KMD3 747 aaKnown RBP18.73■□□□□ 0.59
TNFSF13B-201ENST00000375887 VPS8Q8N3P4 1428 aa18.68■□□□□ 0.58
TNFSF13B-201ENST00000375887 ZNF316A6NFI3 1004 aaPredicted RBP18.64■□□□□ 0.57
TNFSF13B-201ENST00000375887 TOP2BQ02880 1626 aa18.61■□□□□ 0.57
TNFSF13B-201ENST00000375887 APLP2Q06481 763 aa18.58■□□□□ 0.56
TNFSF13B-201ENST00000375887 GTF3C3Q9Y5Q9 886 aa18.54■□□□□ 0.56
TNFSF13B-201ENST00000375887 CENPBP07199 599 aaPredicted RBP18.53■□□□□ 0.56
TNFSF13B-201ENST00000375887 PRXQ9BXM0 1461 aa18.51■□□□□ 0.55
TNFSF13B-201ENST00000375887 BIVM-ERCC5R4GMW8 1640 aa18.5■□□□□ 0.55
TNFSF13B-201ENST00000375887 YTHDC1Q96MU7 727 aaKnown RBP18.49■□□□□ 0.55
TNFSF13B-201ENST00000375887 NCAPD3P42695 1498 aa18.46■□□□□ 0.55
TNFSF13B-201ENST00000375887 KANK4Q5T7N3 995 aaPredicted RBP18.46■□□□□ 0.55
TNFSF13B-201ENST00000375887 ARAP1Q96P48 1450 aa18.46■□□□□ 0.55
TNFSF13B-201ENST00000375887 CUX1P39880 1505 aa18.46■□□□□ 0.54
TNFSF13B-201ENST00000375887 MYT1Q01538 1121 aa18.45■□□□□ 0.54
TNFSF13B-201ENST00000375887 MIER1Q8N108 512 aa18.45■□□□□ 0.54
TNFSF13B-201ENST00000375887 ERICH3Q5RHP9 1530 aa18.44■□□□□ 0.54
TNFSF13B-201ENST00000375887 HMGXB3Q12766 1538 aa18.41■□□□□ 0.54
TNFSF13B-201ENST00000375887 KIF27Q86VH2 1401 aa18.37■□□□□ 0.53
TNFSF13B-201ENST00000375887 CFTRP13569 1480 aa18.36■□□□□ 0.53
TNFSF13B-201ENST00000375887 DHX57Q6P158 1386 aaKnown RBP18.34■□□□□ 0.53
TNFSF13B-201ENST00000375887 ITGAEP38570 1179 aa18.29■□□□□ 0.52
TNFSF13B-201ENST00000375887 ARHGAP35Q9NRY4 1499 aa18.28■□□□□ 0.52
TNFSF13B-201ENST00000375887 CLSPNQ9HAW4 1339 aa18.26■□□□□ 0.51
TNFSF13B-201ENST00000375887 RRBP1Q9P2E9 1410 aaKnown RBP18.26■□□□□ 0.51
TNFSF13B-201ENST00000375887 IGF1RP08069 1367 aa18.24■□□□□ 0.51
TNFSF13B-201ENST00000375887 CUX2O14529 1486 aa18.2■□□□□ 0.5
TNFSF13B-201ENST00000375887 CCNB3Q8WWL7 1395 aa18.2■□□□□ 0.5
TNFSF13B-201ENST00000375887 CADPSQ9ULU8 1353 aa18.15■□□□□ 0.5
TNFSF13B-201ENST00000375887 CARMIL1Q5VZK9 1371 aa18.13■□□□□ 0.49
TNFSF13B-201ENST00000375887 P3H3Q8IVL6 736 aa18.11■□□□□ 0.49
TNFSF13B-201ENST00000375887 FGD5Q6ZNL6 1462 aa18.1■□□□□ 0.49
TNFSF13B-201ENST00000375887 ATP1B4Q9UN42 357 aaPredicted RBP18.08■□□□□ 0.48
TNFSF13B-201ENST00000375887 RAB3GAP2Q9H2M9 1393 aa18.07■□□□□ 0.48
TNFSF13B-201ENST00000375887 PRDM2Q13029 1718 aa18.06■□□□□ 0.48
TNFSF13B-201ENST00000375887 TIAM1Q13009 1591 aa18.05■□□□□ 0.48
TNFSF13B-201ENST00000375887 PHLDB1Q86UU1 1377 aa18.03■□□□□ 0.48
TNFSF13B-201ENST00000375887 LRRC9Q6ZRR7 1453 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms