RNA–Protein interactions for RNA: ENST00000318962.8

ALS2CL-201, Transcript of ALS2 C-terminal like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALS2CL, Length 4,741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALS2CL-201ENST00000318962 NISCHQ9Y2I1 1504 aa20.58■□□□□ 0.89
ALS2CL-201ENST00000318962 DCAF8L2P0C7V8 631 aa20.49■□□□□ 0.87
ALS2CL-201ENST00000318962 SUPT5HO00267 1087 aaKnown RBP19.63■□□□□ 0.73
ALS2CL-201ENST00000318962 SHROOM4Q9ULL8 1493 aa19.31■□□□□ 0.68
ALS2CL-201ENST00000318962 PELP1Q8IZL8 1130 aaKnown RBP19.03■□□□□ 0.64
ALS2CL-201ENST00000318962 MYT1Q01538 1121 aa18.82■□□□□ 0.6
ALS2CL-201ENST00000318962 EHMT2Q96KQ7 1210 aa18.75■□□□□ 0.59
ALS2CL-201ENST00000318962 APLP2Q06481 763 aa18.54■□□□□ 0.56
ALS2CL-201ENST00000318962 PCGF6Q9BYE7 350 aa18.5■□□□□ 0.55
ALS2CL-201ENST00000318962 ZEB1P37275 1124 aaPredicted RBP18.47■□□□□ 0.55
ALS2CL-201ENST00000318962 FAM9AQ8IZU1 332 aaPredicted RBP18.45■□□□□ 0.54
ALS2CL-201ENST00000318962 CENPBP07199 599 aaPredicted RBP18.38■□□□□ 0.53
ALS2CL-201ENST00000318962 HRCP23327 699 aa18.29■□□□□ 0.52
ALS2CL-201ENST00000318962 TRIM41Q8WV44 630 aa18.24■□□□□ 0.51
ALS2CL-201ENST00000318962 TTBK1Q5TCY1 1321 aaPredicted RBP18.15■□□□□ 0.5
ALS2CL-201ENST00000318962 ERICH6Q7L0X2 663 aa18.02■□□□□ 0.48
ALS2CL-201ENST00000318962 TRIM26Q12899 539 aaPredicted RBP17.99■□□□□ 0.47
ALS2CL-201ENST00000318962 RANGAP1P46060 587 aaPredicted RBP17.97■□□□□ 0.47
ALS2CL-201ENST00000318962 CCER1Q8TC90 406 aaPredicted RBP17.97■□□□□ 0.47
ALS2CL-201ENST00000318962 UBTFP17480 764 aaKnown RBP17.94■□□□□ 0.46
ALS2CL-201ENST00000318962 CHIC1Q5VXU3 224 aa17.86■□□□□ 0.45
ALS2CL-201ENST00000318962 ATP1B4Q9UN42 357 aaPredicted RBP17.8■□□□□ 0.44
ALS2CL-201ENST00000318962 YTHDC1Q96MU7 727 aaKnown RBP17.7■□□□□ 0.42
ALS2CL-201ENST00000318962 NEFLP07196 543 aa17.62■□□□□ 0.41
ALS2CL-201ENST00000318962 PPARGC1BQ86YN6 1023 aaKnown RBP17.58■□□□□ 0.4
ALS2CL-201ENST00000318962 LOC105371045A0A1W2PR82 267 aa17.51■□□□□ 0.39
ALS2CL-201ENST00000318962 ABCC9O60706 1549 aa17.42■□□□□ 0.38
ALS2CL-201ENST00000318962 DCAF1Q9Y4B6 1507 aa17.29■□□□□ 0.36
ALS2CL-201ENST00000318962 ITGAEP38570 1179 aa17.29■□□□□ 0.36
ALS2CL-201ENST00000318962 DIEXFQ68CQ4 756 aaKnown RBP17.27■□□□□ 0.36
ALS2CL-201ENST00000318962 HNRNPUL2Q1KMD3 747 aaKnown RBP17.26■□□□□ 0.35
ALS2CL-201ENST00000318962 GTF3C3Q9Y5Q9 886 aa17.25■□□□□ 0.35
ALS2CL-201ENST00000318962 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.2■□□□□ 0.34
ALS2CL-201ENST00000318962 PABPN1Q86U42 306 aaKnown RBP eCLIP17.19■□□□□ 0.34
ALS2CL-201ENST00000318962 ACIN1Q9UKV3 1341 aaKnown RBP17.11■□□□□ 0.33
ALS2CL-201ENST00000318962 ZCCHC6Q5VYS8 1495 aaKnown RBP17.08■□□□□ 0.32
ALS2CL-201ENST00000318962 MYT1LQ9UL68 1186 aa17.02■□□□□ 0.32
ALS2CL-201ENST00000318962 POLR3GLQ9BT43 218 aa17.02■□□□□ 0.32
ALS2CL-201ENST00000318962 RTL5Q5HYW3 569 aaPredicted RBP17.02■□□□□ 0.31
ALS2CL-201ENST00000318962 CCDC180Q9P1Z9 1646 aa16.99■□□□□ 0.31
ALS2CL-201ENST00000318962 DAXXQ9UER7 740 aaPredicted RBP16.97■□□□□ 0.31
ALS2CL-201ENST00000318962 ZNF316A6NFI3 1004 aaPredicted RBP16.94■□□□□ 0.3
ALS2CL-201ENST00000318962 FAM50AQ14320 339 aaKnown RBP16.91■□□□□ 0.3
ALS2CL-201ENST00000318962 CLSPNQ9HAW4 1339 aa16.91■□□□□ 0.3
ALS2CL-201ENST00000318962 CSRNP3Q8WYN3 585 aa16.84■□□□□ 0.29
ALS2CL-201ENST00000318962 SCRIBQ14160 1630 aa16.82■□□□□ 0.28
ALS2CL-201ENST00000318962 CNGB1Q14028 1251 aaPredicted RBP16.82■□□□□ 0.28
ALS2CL-201ENST00000318962 SCAF1Q9H7N4 1312 aaKnown RBP16.79■□□□□ 0.28
ALS2CL-201ENST00000318962 MYO15BQ96JP2 1530 aa16.78■□□□□ 0.28
ALS2CL-201ENST00000318962 TRIM52Q96A61 297 aa16.78■□□□□ 0.28
ALS2CL-201ENST00000318962 BCANQ96GW7 911 aa16.76■□□□□ 0.27
ALS2CL-201ENST00000318962 NEUROD1Q13562 356 aa16.73■□□□□ 0.27
ALS2CL-201ENST00000318962 CDK11AQ9UQ88 783 aaPredicted RBP16.69■□□□□ 0.26
ALS2CL-201ENST00000318962 SLC4A1APQ9BWU0 796 aaKnown RBP16.64■□□□□ 0.25
ALS2CL-201ENST00000318962 ANP32CO43423 234 aa16.61■□□□□ 0.25
ALS2CL-201ENST00000318962 RB1CC1Q8TDY2 1594 aa16.56■□□□□ 0.24
ALS2CL-201ENST00000318962 FBLN2P98095 1184 aa16.55■□□□□ 0.24
ALS2CL-201ENST00000318962 P3H3Q8IVL6 736 aa16.54■□□□□ 0.24
ALS2CL-201ENST00000318962 ZNF326Q5BKZ1 582 aaKnown RBP16.53■□□□□ 0.24
ALS2CL-201ENST00000318962 NACADO15069 1562 aa16.51■□□□□ 0.23
ALS2CL-201ENST00000318962 EIF5BO60841 1220 aaKnown RBP16.46■□□□□ 0.23
ALS2CL-201ENST00000318962 RSF1Q96T23 1441 aaPredicted RBP16.44■□□□□ 0.22
ALS2CL-201ENST00000318962 ANP32AP39687 249 aaKnown RBP16.41■□□□□ 0.22
ALS2CL-201ENST00000318962 ARID3CA6NKF2 412 aa16.4■□□□□ 0.22
ALS2CL-201ENST00000318962 ANP32EQ9BTT0 268 aa16.38■□□□□ 0.21
ALS2CL-201ENST00000318962 EEA1Q15075 1411 aa16.38■□□□□ 0.21
ALS2CL-201ENST00000318962 FKBP8Q14318 412 aa16.37■□□□□ 0.21
ALS2CL-201ENST00000318962 GLIPR1L2Q4G1C9 344 aa16.36■□□□□ 0.21
ALS2CL-201ENST00000318962 ZNF777Q9ULD5 760 aaPredicted RBP16.33■□□□□ 0.21
ALS2CL-201ENST00000318962 MIER1Q8N108 512 aa16.33■□□□□ 0.2
ALS2CL-201ENST00000318962 TONSLQ96HA7 1378 aa16.3■□□□□ 0.2
ALS2CL-201ENST00000318962 CLIP1P30622 1438 aa16.24■□□□□ 0.19
ALS2CL-201ENST00000318962 BCL11AQ9H165 835 aa16.24■□□□□ 0.19
ALS2CL-201ENST00000318962 CEP162Q5TB80 1403 aa16.21■□□□□ 0.19
ALS2CL-201ENST00000318962 ZBTB47Q9UFB7 747 aaPredicted RBP16.21■□□□□ 0.19
ALS2CL-201ENST00000318962 BAZ1AQ9NRL2 1556 aaPredicted RBP16.21■□□□□ 0.18
ALS2CL-201ENST00000318962 BAZ1BQ9UIG0 1483 aaKnown RBP16.2■□□□□ 0.18
ALS2CL-201ENST00000318962 WRNQ14191 1432 aaPredicted RBP eCLIP16.2■□□□□ 0.18
ALS2CL-201ENST00000318962 CANXP27824 592 aaKnown RBP16.19■□□□□ 0.18
ALS2CL-201ENST00000318962 GOLGA3Q08378 1498 aa16.19■□□□□ 0.18
ALS2CL-201ENST00000318962 TNIKQ9UKE5 1360 aa16.19■□□□□ 0.18
ALS2CL-201ENST00000318962 NEFMP07197 916 aa16.19■□□□□ 0.18
ALS2CL-201ENST00000318962 NBR1Q14596 966 aa16.17■□□□□ 0.18
ALS2CL-201ENST00000318962 DDX10Q13206 875 aaKnown RBP16.15■□□□□ 0.18
ALS2CL-201ENST00000318962 NPM2Q86SE8 214 aaKnown RBP16.15■□□□□ 0.18
ALS2CL-201ENST00000318962 MTUS2Q5JR59 1369 aa16.14■□□□□ 0.17
ALS2CL-201ENST00000318962 NPM1P06748 294 aaKnown RBP eCLIP16.12■□□□□ 0.17
ALS2CL-201ENST00000318962 CHIC2Q9UKJ5 165 aa16.1■□□□□ 0.17
ALS2CL-201ENST00000318962 KIF27Q86VH2 1401 aa16.1■□□□□ 0.17
ALS2CL-201ENST00000318962 HNRNPUQ00839 825 aaKnown RBP eCLIP16.1■□□□□ 0.17
ALS2CL-201ENST00000318962 CHMP7Q8WUX9 453 aaPredicted RBP16.1■□□□□ 0.17
ALS2CL-201ENST00000318962 TSPY4P0CV99 314 aa16.08■□□□□ 0.16
ALS2CL-201ENST00000318962 TSPY10P0CW01 314 aa16.08■□□□□ 0.16
ALS2CL-201ENST00000318962 CEP164Q9UPV0 1460 aa16.08■□□□□ 0.16
ALS2CL-201ENST00000318962 CECR2Q9BXF3 1484 aa16.03■□□□□ 0.16
ALS2CL-201ENST00000318962 FAM9BQ8IZU0 186 aa16.03■□□□□ 0.16
ALS2CL-201ENST00000318962 CHGAP10645 457 aaKnown RBP16.02■□□□□ 0.15
ALS2CL-201ENST00000318962 SUPT16HQ9Y5B9 1047 aaKnown RBP16.01■□□□□ 0.15
ALS2CL-201ENST00000318962 SLC24A1O60721 1099 aa16■□□□□ 0.15
ALS2CL-201ENST00000318962 ESF1Q9H501 851 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms