Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.33e-26■□□□□ 8.5
U2AF2P26368 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.23e-26■□□□□ 8.5
U2AF2P26368 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.163e-26■□□□□ 8.5
U2AF2P26368 PRAME-209ENST00000439106 891 ntAPPRIS ALT2 TSL 315.41■□□□□ 0.063e-26■□□□□ 8.5
U2AF2P26368 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.023e-26■□□□□ 8.5
U2AF2P26368 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.013e-26■□□□□ 8.5
U2AF2P26368 PRAME-211ENST00000476336 589 ntTSL 215□□□□□ -0.013e-26■□□□□ 8.5
U2AF2P26368 PRAME-213ENST00000492657 2831 ntTSL 1 (best)14.92□□□□□ -0.023e-26■□□□□ 8.5
U2AF2P26368 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.153e-26■□□□□ 8.5
U2AF2P26368 PRAME-207ENST00000420709 705 ntAPPRIS ALT2 TSL 214.1□□□□□ -0.153e-26■□□□□ 8.5
U2AF2P26368 PRAME-204ENST00000403441 567 ntAPPRIS ALT2 TSL 313.63□□□□□ -0.233e-26■□□□□ 8.5
U2AF2P26368 PRAME-210ENST00000442481 581 ntTSL 312.9□□□□□ -0.343e-26■□□□□ 8.5
U2AF2P26368 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.524e-11■□□□□ 8.5
U2AF2P26368 LAMTOR1-203ENST00000535872 899 ntTSL 515.77■□□□□ 0.124e-11■□□□□ 8.5
U2AF2P26368 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC13.17□□□□□ -0.34e-11■□□□□ 8.5
U2AF2P26368 LAMTOR1-205ENST00000539797 535 ntTSL 512.39□□□□□ -0.434e-11■□□□□ 8.5
U2AF2P26368 LAMTOR1-204ENST00000538404 1346 ntTSL 2 BASIC12.21□□□□□ -0.454e-11■□□□□ 8.5
U2AF2P26368 LAMTOR1-202ENST00000535107 619 ntTSL 3 BASIC12.06□□□□□ -0.484e-11■□□□□ 8.5
U2AF2P26368 LAMTOR1-207ENST00000544594 849 ntTSL 310.39□□□□□ -0.754e-11■□□□□ 8.5
U2AF2P26368 BCL6-206ENST00000450123 2003 ntTSL 1 (best) BASIC13.42□□□□□ -0.262e-6■□□□□ 8.5
U2AF2P26368 SEPT2-225ENST00000457874 484 ntTSL 36.63□□□□□ -1.355e-25■□□□□ 8.5
U2AF2P26368 SEPT2-236ENST00000476841 304 ntTSL 34.93□□□□□ -1.625e-25■□□□□ 8.5
U2AF2P26368 SEPT2-239ENST00000484167 668 ntTSL 24.05□□□□□ -1.765e-25■□□□□ 8.5
U2AF2P26368 SEPT2-215ENST00000429791 724 ntTSL 424.55■■□□□ 1.523e-16■□□□□ 8.5
U2AF2P26368 SEPT2-226ENST00000461048 1163 ntTSL 1 (best)23.59■■□□□ 1.373e-16■□□□□ 8.5
U2AF2P26368 SEPT2-210ENST00000420786 539 ntTSL 522.52■■□□□ 1.23e-16■□□□□ 8.5
U2AF2P26368 SEPT2-214ENST00000428524 644 ntTSL 511.14□□□□□ -0.633e-16■□□□□ 8.5
U2AF2P26368 SEPT2-219ENST00000441533 372 ntTSL 59.34□□□□□ -0.913e-16■□□□□ 8.5
U2AF2P26368 SEPT2-221ENST00000445030 575 ntTSL 38.32□□□□□ -1.083e-16■□□□□ 8.5
U2AF2P26368 UQCC1-217ENST00000482440 306 ntTSL 318.52■□□□□ 0.563e-15■□□□□ 8.5
U2AF2P26368 UQCC1-215ENST00000472559 1921 ntTSL 1 (best)15.25■□□□□ 0.033e-15■□□□□ 8.5
U2AF2P26368 UQCC1-221ENST00000496812 801 ntTSL 312.43□□□□□ -0.423e-15■□□□□ 8.5
U2AF2P26368 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.022e-9■□□□□ 8.5
U2AF2P26368 LANCL1-208ENST00000453956 590 ntTSL 414.29□□□□□ -0.122e-9■□□□□ 8.5
U2AF2P26368 LANCL1-207ENST00000450366 4602 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.232e-9■□□□□ 8.5
U2AF2P26368 LANCL1-206ENST00000448951 808 ntTSL 312.8□□□□□ -0.362e-9■□□□□ 8.5
U2AF2P26368 LANCL1-203ENST00000431941 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.622e-9■□□□□ 8.5
U2AF2P26368 LANCL1-201ENST00000233714 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.732e-9■□□□□ 8.5
U2AF2P26368 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.492e-9■□□□□ 8.5
U2AF2P26368 LRRC8D-205ENST00000525774 588 ntTSL 427■■□□□ 1.912e-7■□□□□ 8.5
U2AF2P26368 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.39■□□□□ 0.852e-7■□□□□ 8.5
U2AF2P26368 PPP4R3A-202ENST00000554390 2953 ntTSL 1 (best)20.36■□□□□ 0.852e-7■□□□□ 8.5
U2AF2P26368 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.621e-13■□□□□ 8.5
U2AF2P26368 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.492e-7■□□□□ 8.5
U2AF2P26368 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.462e-7■□□□□ 8.5
U2AF2P26368 MTA3-211ENST00000467925 1672 ntTSL 517.22■□□□□ 0.352e-7■□□□□ 8.5
U2AF2P26368 PPP4R3A-201ENST00000554308 2515 ntTSL 517.09■□□□□ 0.332e-7■□□□□ 8.5
U2AF2P26368 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.322e-7■□□□□ 8.5
U2AF2P26368 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.32e-7■□□□□ 8.5
U2AF2P26368 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.93■□□□□ 0.142e-7■□□□□ 8.5
U2AF2P26368 PPP4R3A-207ENST00000555029 571 ntTSL 515.29■□□□□ 0.042e-7■□□□□ 8.5
U2AF2P26368 PPP4R3A-206ENST00000554943 3369 ntTSL 5 BASIC14.79□□□□□ -0.042e-7■□□□□ 8.5
U2AF2P26368 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC14.6□□□□□ -0.072e-7■□□□□ 8.5
U2AF2P26368 INPP5D-204ENST00000445964 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.132e-7■□□□□ 8.5
U2AF2P26368 LRRC8D-206ENST00000527156 922 ntTSL 212.43□□□□□ -0.422e-7■□□□□ 8.5
U2AF2P26368 LRRC8D-207ENST00000532201 597 ntTSL 411.82□□□□□ -0.522e-7■□□□□ 8.5
U2AF2P26368 LRRC8D-202ENST00000394593 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.612e-7■□□□□ 8.5
U2AF2P26368 ZNF780B-201ENST00000221355 3538 ntTSL 2 BASIC11□□□□□ -0.652e-7■□□□□ 8.5
U2AF2P26368 ZNF780B-206ENST00000598845 401 ntTSL 3 BASIC9.73□□□□□ -0.852e-7■□□□□ 8.5
U2AF2P26368 LRRC8D-203ENST00000414841 666 ntTSL 38.84□□□□□ -0.992e-7■□□□□ 8.5
U2AF2P26368 ZNF780B-205ENST00000595995 393 ntTSL 56.81□□□□□ -1.322e-7■□□□□ 8.5
U2AF2P26368 ARIH1-208ENST00000566063 630 ntTSL 26.09□□□□□ -1.432e-7■□□□□ 8.5
U2AF2P26368 ZDHHC17-206ENST00000549010 491 ntTSL 35.92□□□□□ -1.462e-7■□□□□ 8.5
U2AF2P26368 REV1-211ENST00000481719 754 ntTSL 24.62□□□□□ -1.672e-7■□□□□ 8.5
U2AF2P26368 ZC3H13-204ENST00000464597 535 ntTSL 24.06□□□□□ -1.762e-7■□□□□ 8.5
U2AF2P26368 ARIH1-204ENST00000562891 604 ntTSL 53.12□□□□□ -1.912e-7■□□□□ 8.5
U2AF2P26368 LRRC8D-204ENST00000441269 905 ntTSL 33□□□□□ -1.932e-7■□□□□ 8.5
U2AF2P26368 CARS2-212ENST00000537386 739 ntTSL 421.51■■□□□ 1.035e-6■□□□□ 8.5
U2AF2P26368 CARS2-225ENST00000541362 1051 ntTSL 221.26■□□□□ 0.995e-6■□□□□ 8.5
U2AF2P26368 TMEM41A-202ENST00000382227 541 ntTSL 420.62■□□□□ 0.895e-6■□□□□ 8.5
U2AF2P26368 CARS2-210ENST00000535516 2313 ntTSL 520.06■□□□□ 0.85e-6■□□□□ 8.5
U2AF2P26368 CARS2-208ENST00000487253 844 ntTSL 519.73■□□□□ 0.755e-6■□□□□ 8.5
U2AF2P26368 CARS2-232ENST00000545506 788 ntTSL 318.28■□□□□ 0.525e-6■□□□□ 8.5
U2AF2P26368 CARS2-202ENST00000375781 2747 ntTSL 217.66■□□□□ 0.425e-6■□□□□ 8.5
U2AF2P26368 CARS2-220ENST00000540006 1485 ntTSL 217.65■□□□□ 0.425e-6■□□□□ 8.5
U2AF2P26368 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.47■□□□□ 0.395e-6■□□□□ 8.5
U2AF2P26368 CARS2-217ENST00000537802 3225 ntTSL 216.51■□□□□ 0.235e-6■□□□□ 8.5
U2AF2P26368 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC16.36■□□□□ 0.215e-6■□□□□ 8.5
U2AF2P26368 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.185e-6■□□□□ 8.5
U2AF2P26368 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.155e-6■□□□□ 8.5
U2AF2P26368 MSL2-203ENST00000473093 543 ntTSL 415.91■□□□□ 0.145e-6■□□□□ 8.5
U2AF2P26368 TMEM41A-206ENST00000475480 1035 ntTSL 315.03■□□□□ -05e-6■□□□□ 8.5
U2AF2P26368 CFLAR-216ENST00000460961 548 ntTSL 213.8□□□□□ -0.25e-6■□□□□ 8.5
U2AF2P26368 CARS2-211ENST00000535615 711 ntTSL 512.47□□□□□ -0.415e-6■□□□□ 8.5
U2AF2P26368 GIGYF2-214ENST00000427233 530 ntTSL 511.2□□□□□ -0.625e-6■□□□□ 8.5
U2AF2P26368 GIGYF2-239ENST00000484409 367 ntTSL 38.22□□□□□ -1.095e-6■□□□□ 8.5
U2AF2P26368 GIGYF2-232ENST00000474465 625 ntTSL 28.1□□□□□ -1.115e-6■□□□□ 8.5
U2AF2P26368 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.32□□□□□ -1.245e-6■□□□□ 8.5
U2AF2P26368 CFLAR-217ENST00000461422 717 ntTSL 25.88□□□□□ -1.475e-6■□□□□ 8.5
U2AF2P26368 MSL2-205ENST00000491050 559 ntTSL 45.56□□□□□ -1.525e-6■□□□□ 8.5
U2AF2P26368 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.13□□□□□ -2.075e-6■□□□□ 8.5
U2AF2P26368 MSL2-204ENST00000481989 576 ntTSL 40.97□□□□□ -2.255e-6■□□□□ 8.5
U2AF2P26368 SLC25A30-205ENST00000522438 453 ntTSL 527.73■■■□□ 2.037e-7■□□□□ 8.5
U2AF2P26368 ZNF444-210ENST00000592171 688 ntTSL 324.73■■□□□ 1.557e-7■□□□□ 8.5
U2AF2P26368 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.75■■□□□ 1.397e-7■□□□□ 8.5
U2AF2P26368 KDSR-208ENST00000589530 588 ntTSL 222.2■■□□□ 1.147e-7■□□□□ 8.5
U2AF2P26368 CDK5RAP2-214ENST00000481266 970 ntTSL 522.11■■□□□ 1.137e-7■□□□□ 8.5
U2AF2P26368 KDSR-212ENST00000592327 553 ntTSL 421.98■■□□□ 1.117e-7■□□□□ 8.5
U2AF2P26368 MAN2C1-236ENST00000567360 457 ntTSL 221.92■■□□□ 1.17e-7■□□□□ 8.5
U2AF2P26368 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.787e-7■□□□□ 8.5
Retrieved 100 of 36,523 protein–RNA pairs in 751 ms