RNA–Protein interactions for RNA: ENST00000464597.2

ZC3H13-204, Transcript of zinc finger CCCH-type containing 13, humanhuman

TSL 2

Gene ZC3H13, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H13-204ENST00000464597 AEBP2Q6ZN18 517 aaPredicted RBP24.21■■□□□ 1.47
ZC3H13-204ENST00000464597 CHIC1Q5VXU3 224 aa22.75■■□□□ 1.23
ZC3H13-204ENST00000464597 SENP3Q9H4L4 574 aaPredicted RBP20.89■□□□□ 0.93
ZC3H13-204ENST00000464597 PHF23Q9BUL5 403 aaPredicted RBP20.47■□□□□ 0.87
ZC3H13-204ENST00000464597 FOXD1Q16676 465 aa19.51■□□□□ 0.71
ZC3H13-204ENST00000464597 POTEDQ86YR6 584 aa19.5■□□□□ 0.71
ZC3H13-204ENST00000464597 MSH5O43196 834 aa18.64■□□□□ 0.57
ZC3H13-204ENST00000464597 PIAS4Q8N2W9 510 aaPredicted RBP18.1■□□□□ 0.49
ZC3H13-204ENST00000464597 PPP6R1Q9UPN7 881 aa17.58■□□□□ 0.4
ZC3H13-204ENST00000464597 ADRA2BP18089 450 aa17.53■□□□□ 0.4
ZC3H13-204ENST00000464597 PLPPR3Q6T4P5 718 aa17.49■□□□□ 0.39
ZC3H13-204ENST00000464597 CACNB1Q02641 598 aaPredicted RBP16.52■□□□□ 0.24
ZC3H13-204ENST00000464597 DMRT2Q9Y5R5 561 aa16.39■□□□□ 0.21
ZC3H13-204ENST00000464597 MAPK8IP2Q13387 824 aaPredicted RBP16.33■□□□□ 0.2
ZC3H13-204ENST00000464597 SCAF1Q9H7N4 1312 aaKnown RBP16.16■□□□□ 0.18
ZC3H13-204ENST00000464597 DCAF8L1A6NGE4 600 aa15.89■□□□□ 0.13
ZC3H13-204ENST00000464597 RNF39Q9H2S5 420 aa15.77■□□□□ 0.12
ZC3H13-204ENST00000464597 C1QBPQ07021 282 aaKnown RBP15.54■□□□□ 0.08
ZC3H13-204ENST00000464597 HOXD11P31277 338 aaPredicted RBP15.47■□□□□ 0.07
ZC3H13-204ENST00000464597 PPP4R3CPQ6ZMV5 832 aa15.2■□□□□ 0.02
ZC3H13-204ENST00000464597 RNF216Q9NWF9 866 aaPredicted RBP15.17■□□□□ 0.02
ZC3H13-204ENST00000464597 POTEHQ6S545 545 aa15.15■□□□□ 0.02
ZC3H13-204ENST00000464597 CNKSR2Q8WXI2 1034 aa15.12■□□□□ 0.01
ZC3H13-204ENST00000464597 DNAJC5BQ9UF47 199 aa15.1■□□□□ 0.01
ZC3H13-204ENST00000464597 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.84□□□□□ -0.031e-6■□□□□ 11.2
ZC3H13-204ENST00000464597 DSG3P32926 999 aa14.51□□□□□ -0.09
ZC3H13-204ENST00000464597 CAPN15O75808 1086 aa14.5□□□□□ -0.09
ZC3H13-204ENST00000464597 NCBP3Q53F19 620 aaKnown RBP14.45□□□□□ -0.1
ZC3H13-204ENST00000464597 SPINK5Q9NQ38 1064 aaPredicted RBP14.39□□□□□ -0.11
ZC3H13-204ENST00000464597 U3KPZ7 1027 aaPredicted RBP14.35□□□□□ -0.11
ZC3H13-204ENST00000464597 NPM3O75607 178 aaKnown RBP14.14□□□□□ -0.15
ZC3H13-204ENST00000464597 TRHP20396 242 aaPredicted RBP14.06□□□□□ -0.16
ZC3H13-204ENST00000464597 ABCB7O75027 752 aa14.04□□□□□ -0.16
ZC3H13-204ENST00000464597 APLP2Q06481 763 aa14□□□□□ -0.17
ZC3H13-204ENST00000464597 ZNF219Q9P2Y4 722 aaPredicted RBP14□□□□□ -0.17
ZC3H13-204ENST00000464597 RBM42Q9BTD8 480 aaKnown RBP13.95□□□□□ -0.18
ZC3H13-204ENST00000464597 CHRDL2Q6WN34 429 aa13.91□□□□□ -0.18
ZC3H13-204ENST00000464597 SP7Q8TDD2 431 aaPredicted RBP13.83□□□□□ -0.2
ZC3H13-204ENST00000464597 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.76□□□□□ -0.21
ZC3H13-204ENST00000464597 HNRNPUL2Q1KMD3 747 aaKnown RBP13.76□□□□□ -0.21
ZC3H13-204ENST00000464597 SLC4A2P04920 1241 aa13.68□□□□□ -0.22
ZC3H13-204ENST00000464597 SAMD1Q6SPF0 538 aaPredicted RBP13.62□□□□□ -0.23
ZC3H13-204ENST00000464597 POLA2Q14181 598 aa13.46□□□□□ -0.25
ZC3H13-204ENST00000464597 HAX1O00165 279 aa13.44□□□□□ -0.26
ZC3H13-204ENST00000464597 AKT1S1Q96B36 256 aa13.42□□□□□ -0.26
ZC3H13-204ENST00000464597 PIP4P2Q8N4L2 257 aa13.38□□□□□ -0.27
ZC3H13-204ENST00000464597 REM2Q8IYK8 340 aaPredicted RBP13.27□□□□□ -0.29
ZC3H13-204ENST00000464597 FXR2P51116 673 aaKnown RBP eCLIP13.16□□□□□ -0.3
ZC3H13-204ENST00000464597 ZBTB12Q9Y330 459 aaPredicted RBP13.16□□□□□ -0.3
ZC3H13-204ENST00000464597 MYCNP04198 464 aaPredicted RBP13.15□□□□□ -0.3
ZC3H13-204ENST00000464597 KCNA4P22459 653 aa13.15□□□□□ -0.3
ZC3H13-204ENST00000464597 PITPNM1O00562 1244 aa13.13□□□□□ -0.31
ZC3H13-204ENST00000464597 EVX2Q03828 476 aa13.09□□□□□ -0.31
ZC3H13-204ENST00000464597 OSCARQ8IYS5 282 aa13.05□□□□□ -0.32
ZC3H13-204ENST00000464597 LHX8Q68G74 356 aa12.97□□□□□ -0.33
ZC3H13-204ENST00000464597 PLSCR2Q9NRY7 297 aa12.89□□□□□ -0.35
ZC3H13-204ENST00000464597 ATF5Q9Y2D1 282 aaPredicted RBP12.83□□□□□ -0.36
ZC3H13-204ENST00000464597 PRKAR2AP13861 404 aaKnown RBP12.82□□□□□ -0.36
ZC3H13-204ENST00000464597 GABBR2O75899 941 aa12.81□□□□□ -0.36
ZC3H13-204ENST00000464597 C19orf67A6NJJ6 358 aa12.78□□□□□ -0.36
ZC3H13-204ENST00000464597 CLEC11AQ9Y240 323 aa12.72□□□□□ -0.37
ZC3H13-204ENST00000464597 SPDYE2BA6NHP3 402 aa12.66□□□□□ -0.38
ZC3H13-204ENST00000464597 SPDYE6P0CI01 402 aa12.66□□□□□ -0.38
ZC3H13-204ENST00000464597 SPDYE2Q495Y8 402 aa12.66□□□□□ -0.38
ZC3H13-204ENST00000464597 SPDYE1Q8NFV5 336 aaPredicted RBP12.66□□□□□ -0.38
ZC3H13-204ENST00000464597 FOXD4L1Q9NU39 408 aa12.57□□□□□ -0.4
ZC3H13-204ENST00000464597 FBLN2P98095 1184 aa12.52□□□□□ -0.41
ZC3H13-204ENST00000464597 CHADLQ6NUI6 762 aa12.49□□□□□ -0.41
ZC3H13-204ENST00000464597 POTEIP0CG38 1075 aa12.47□□□□□ -0.41
ZC3H13-204ENST00000464597 ZNF692Q9BU19 519 aaPredicted RBP12.4□□□□□ -0.42
ZC3H13-204ENST00000464597 CD44P16070 742 aaKnown RBP12.38□□□□□ -0.43
ZC3H13-204ENST00000464597 CLCN6P51797 869 aa12.38□□□□□ -0.43
ZC3H13-204ENST00000464597 PRR29P0C7W0 189 aa12.37□□□□□ -0.43
ZC3H13-204ENST00000464597 DCBLD2Q96PD2 775 aa12.37□□□□□ -0.43
ZC3H13-204ENST00000464597 SSUH2Q9Y2M2 353 aa12.34□□□□□ -0.43
ZC3H13-204ENST00000464597 SLC4A1APQ9BWU0 796 aaKnown RBP12.31□□□□□ -0.44
ZC3H13-204ENST00000464597 POTEMA6NI47 508 aa12.27□□□□□ -0.45
ZC3H13-204ENST00000464597 ATXN8OSP0DMR3 200 aa12.25□□□□□ -0.45
ZC3H13-204ENST00000464597 FARP1Q9Y4F1 1045 aaPredicted RBP12.22□□□□□ -0.45
ZC3H13-204ENST00000464597 POTEGQ6S5H5 508 aa12.2□□□□□ -0.46
ZC3H13-204ENST00000464597 MKRN4PQ13434 485 aaPredicted RBP12.19□□□□□ -0.46
ZC3H13-204ENST00000464597 OTUD5Q96G74 571 aa12.19□□□□□ -0.46
ZC3H13-204ENST00000464597 PABPN1Q86U42 306 aaKnown RBP eCLIP12.17□□□□□ -0.46
ZC3H13-204ENST00000464597 PCDH10Q9P2E7 1040 aa12.13□□□□□ -0.47
ZC3H13-204ENST00000464597 ZNF579Q8NAF0 562 aaKnown RBP12.11□□□□□ -0.47
ZC3H13-204ENST00000464597 ZRANB1Q9UGI0 708 aa12.09□□□□□ -0.47
ZC3H13-204ENST00000464597 POTEB2H3BUK9 544 aa12.04□□□□□ -0.48
ZC3H13-204ENST00000464597 ZBTB22O15209 634 aa12.02□□□□□ -0.49
ZC3H13-204ENST00000464597 GALR2O43603 387 aaPredicted RBP12.01□□□□□ -0.49
ZC3H13-204ENST00000464597 PAK3O75914 559 aaPredicted RBP11.88□□□□□ -0.51
ZC3H13-204ENST00000464597 MAMSTRQ6ZN01 415 aa11.84□□□□□ -0.51
ZC3H13-204ENST00000464597 PELP1Q8IZL8 1130 aaKnown RBP11.82□□□□□ -0.52
ZC3H13-204ENST00000464597 FAM163AQ96GL9 167 aaPredicted RBP11.82□□□□□ -0.52
ZC3H13-204ENST00000464597 PHF12Q96QT6 1004 aa11.81□□□□□ -0.52
ZC3H13-204ENST00000464597 METRNQ9UJH8 293 aa11.8□□□□□ -0.52
ZC3H13-204ENST00000464597 CREBZFQ9NS37 354 aa11.79□□□□□ -0.52
ZC3H13-204ENST00000464597 SLC39A7Q92504 469 aa11.77□□□□□ -0.53
ZC3H13-204ENST00000464597 C7P10643 843 aa11.75□□□□□ -0.53
ZC3H13-204ENST00000464597 LCE2DQ5TA82 110 aaPredicted RBP11.74□□□□□ -0.53
ZC3H13-204ENST00000464597 SCUBE2Q9NQ36 999 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms