Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC12.37□□□□□ -0.43
SCN2BO60939 RAP1A-201ENST00000356415 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 TMUB2-203ENST00000446571 1580 ntTSL 2 BASIC12.37□□□□□ -0.43
SCN2BO60939 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC12.37□□□□□ -0.43
SCN2BO60939 DERL1-202ENST00000405944 1994 ntTSL 2 BASIC12.37□□□□□ -0.43
SCN2BO60939 ZNF461-201ENST00000360357 2361 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
SCN2BO60939 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 POFUT2-203ENST00000349485 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 TESK2-202ENST00000372086 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 SLC37A1-202ENST00000398341 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
SCN2BO60939 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SCN2BO60939 KLF6-206ENST00000497571 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
SCN2BO60939 GRM4-202ENST00000374181 7275 ntTSL 5 BASIC12.37□□□□□ -0.43
SCN2BO60939 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SCN2BO60939 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 DUSP16-201ENST00000228862 3402 ntTSL 5 BASIC12.37□□□□□ -0.43
SCN2BO60939 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.37□□□□□ -0.43
SCN2BO60939 CREB5-204ENST00000396300 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SCN2BO60939 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 AL357509.1-201ENST00000641892 2013 ntBASIC12.37□□□□□ -0.43
SCN2BO60939 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC12.37□□□□□ -0.43
SCN2BO60939 G2E3-212ENST00000553504 3796 ntTSL 5 BASIC12.37□□□□□ -0.43
SCN2BO60939 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC12.36□□□□□ -0.43
SCN2BO60939 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 PCDHGB8P-202ENST00000507007 2873 ntBASIC12.36□□□□□ -0.43
SCN2BO60939 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
SCN2BO60939 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC12.36□□□□□ -0.43
SCN2BO60939 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 ABCF2-201ENST00000222388 2185 ntTSL 5 BASIC12.36□□□□□ -0.43
SCN2BO60939 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC12.36□□□□□ -0.43
SCN2BO60939 GIMAP6-201ENST00000328902 3440 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 TOP1MT-213ENST00000521193 1960 ntTSL 2 BASIC12.36□□□□□ -0.43
SCN2BO60939 CCDC33-206ENST00000558821 1993 ntTSL 2 BASIC12.36□□□□□ -0.43
SCN2BO60939 AC011511.5-201ENST00000589379 3219 ntBASIC12.36□□□□□ -0.43
SCN2BO60939 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SCN2BO60939 ATCAY-205ENST00000600960 2904 ntTSL 5 BASIC12.36□□□□□ -0.43
SCN2BO60939 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 FRMD6-204ENST00000553556 1679 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 STK16-202ENST00000409260 1493 ntTSL 5 BASIC12.36□□□□□ -0.43
SCN2BO60939 PARP15-205ENST00000483793 4439 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
SCN2BO60939 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 HPGD-203ENST00000422112 805 ntTSL 2 BASIC12.36□□□□□ -0.43
SCN2BO60939 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC12.36□□□□□ -0.43
SCN2BO60939 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 PFN2-212ENST00000490975 858 ntTSL 4 BASIC12.36□□□□□ -0.43
SCN2BO60939 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC12.36□□□□□ -0.43
SCN2BO60939 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC12.36□□□□□ -0.43
SCN2BO60939 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC12.36□□□□□ -0.43
SCN2BO60939 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC12.36□□□□□ -0.43
SCN2BO60939 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 RCBTB2-206ENST00000544904 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 FOXN3-AS2-201ENST00000554071 1262 ntBASIC12.36□□□□□ -0.43
SCN2BO60939 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC12.36□□□□□ -0.43
SCN2BO60939 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SCN2BO60939 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC12.36□□□□□ -0.43
SCN2BO60939 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC12.36□□□□□ -0.43
SCN2BO60939 AL118522.1-201ENST00000611368 560 ntBASIC12.36□□□□□ -0.43
SCN2BO60939 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC12.36□□□□□ -0.43
SCN2BO60939 AL353726.2-201ENST00000623259 884 ntBASIC12.36□□□□□ -0.43
SCN2BO60939 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
SCN2BO60939 ATAT1-204ENST00000330083 1728 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 PCLAF-201ENST00000300035 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 PPP4R3A-206ENST00000554943 3369 ntTSL 5 BASIC12.36□□□□□ -0.43
SCN2BO60939 CETP-202ENST00000379780 1537 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.36□□□□□ -0.43
SCN2BO60939 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 CD1A-201ENST00000289429 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 VAV1-202ENST00000539284 2627 ntTSL 5 BASIC12.36□□□□□ -0.43
SCN2BO60939 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC12.36□□□□□ -0.43
SCN2BO60939 AC016831.5-201ENST00000605249 1998 ntBASIC12.36□□□□□ -0.43
SCN2BO60939 UEVLD-213ENST00000543987 2503 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC12.36□□□□□ -0.43
SCN2BO60939 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SCN2BO60939 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SCN2BO60939 NUPL2-201ENST00000258742 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SCN2BO60939 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SCN2BO60939 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SCN2BO60939 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms