RNA–Protein interactions for RNA: ENST00000377795.7

CD74-203, Transcript of CD74 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD74, Length 1,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-203ENST00000377795 NISCHQ9Y2I1 1504 aa31.06■■■□□ 2.56
CD74-203ENST00000377795 CCDC180Q9P1Z9 1646 aa27.44■■□□□ 1.98
CD74-203ENST00000377795 ABCC9O60706 1549 aa26.27■■□□□ 1.8
CD74-203ENST00000377795 ZCCHC6Q5VYS8 1495 aaKnown RBP25.98■■□□□ 1.75
CD74-203ENST00000377795 DCAF1Q9Y4B6 1507 aa25.8■■□□□ 1.72
CD74-203ENST00000377795 MYO15BQ96JP2 1530 aa25.75■■□□□ 1.71
CD74-203ENST00000377795 DCAF8L2P0C7V8 631 aa25.7■■□□□ 1.7
CD74-203ENST00000377795 NACADO15069 1562 aa25.69■■□□□ 1.7
CD74-203ENST00000377795 RB1CC1Q8TDY2 1594 aa25.6■■□□□ 1.69
CD74-203ENST00000377795 SCRIBQ14160 1630 aa24.97■■□□□ 1.59
CD74-203ENST00000377795 UNC13AQ9UPW8 1703 aa24.88■■□□□ 1.57
CD74-203ENST00000377795 SHROOM4Q9ULL8 1493 aa24.72■■□□□ 1.55
CD74-203ENST00000377795 BICRAQ9NZM4 1560 aa24.7■■□□□ 1.54
CD74-203ENST00000377795 PABPN1Q86U42 306 aaKnown RBP eCLIP24.61■■□□□ 1.53
CD74-203ENST00000377795 BAZ1AQ9NRL2 1556 aaPredicted RBP24.08■■□□□ 1.44
CD74-203ENST00000377795 CECR2Q9BXF3 1484 aa24.06■■□□□ 1.44
CD74-203ENST00000377795 EIF4G1Q04637 1599 aaKnown RBP24.04■■□□□ 1.44
CD74-203ENST00000377795 SMARCA4P51532 1647 aa23.98■■□□□ 1.43
CD74-203ENST00000377795 MROH2BQ7Z745 1585 aa23.89■■□□□ 1.41
CD74-203ENST00000377795 RSF1Q96T23 1441 aaPredicted RBP23.83■■□□□ 1.4
CD74-203ENST00000377795 CC2D2AQ9P2K1 1620 aa23.81■■□□□ 1.4
CD74-203ENST00000377795 SMARCA2P51531 1590 aa23.79■■□□□ 1.4
CD74-203ENST00000377795 PEG3Q9GZU2 1588 aa23.79■■□□□ 1.4
CD74-203ENST00000377795 ATAD2BQ9ULI0 1458 aa23.74■■□□□ 1.39
CD74-203ENST00000377795 NCAPD3P42695 1498 aa23.68■■□□□ 1.38
CD74-203ENST00000377795 WIZO95785 1651 aa23.64■■□□□ 1.38
CD74-203ENST00000377795 HMGXB3Q12766 1538 aa23.62■■□□□ 1.37
CD74-203ENST00000377795 DNAJC5BQ9UF47 199 aa23.59■■□□□ 1.37
CD74-203ENST00000377795 BAZ1BQ9UIG0 1483 aaKnown RBP23.59■■□□□ 1.37
CD74-203ENST00000377795 SUPT5HO00267 1087 aaKnown RBP23.56■■□□□ 1.36
CD74-203ENST00000377795 TOP2AP11388 1531 aaKnown RBP23.5■■□□□ 1.35
CD74-203ENST00000377795 CCDC88BA6NC98 1476 aa23.19■■□□□ 1.3
CD74-203ENST00000377795 CADPSQ9ULU8 1353 aa23.01■■□□□ 1.27
CD74-203ENST00000377795 LAMC3Q9Y6N6 1575 aa22.99■■□□□ 1.27
CD74-203ENST00000377795 CFTRP13569 1480 aa22.98■■□□□ 1.27
CD74-203ENST00000377795 PDS5BQ9NTI5 1447 aa22.84■■□□□ 1.25
CD74-203ENST00000377795 NESP48681 1621 aa22.84■■□□□ 1.25
CD74-203ENST00000377795 PRDM2Q13029 1718 aa22.82■■□□□ 1.24
CD74-203ENST00000377795 FANCD2Q9BXW9 1451 aa22.73■■□□□ 1.23
CD74-203ENST00000377795 ERCC6Q03468 1493 aa22.67■■□□□ 1.22
CD74-203ENST00000377795 CEP164Q9UPV0 1460 aa22.67■■□□□ 1.22
CD74-203ENST00000377795 KIF21AQ7Z4S6 1674 aa22.61■■□□□ 1.21
CD74-203ENST00000377795 ABCC8Q09428 1581 aa22.55■■□□□ 1.2
CD74-203ENST00000377795 MRC2Q9UBG0 1479 aa22.54■■□□□ 1.2
CD74-203ENST00000377795 WRNQ14191 1432 aaPredicted RBP eCLIP22.48■■□□□ 1.19
CD74-203ENST00000377795 DNMBPQ6XZF7 1577 aa22.45■■□□□ 1.18
CD74-203ENST00000377795 THOC2Q8NI27 1593 aaKnown RBP22.44■■□□□ 1.18
CD74-203ENST00000377795 WDR62O43379 1518 aa22.43■■□□□ 1.18
CD74-203ENST00000377795 URB2Q14146 1524 aaKnown RBP22.42■■□□□ 1.18
CD74-203ENST00000377795 TOPBP1Q92547 1522 aa22.41■■□□□ 1.18
CD74-203ENST00000377795 CUX1P39880 1505 aa22.39■■□□□ 1.17
CD74-203ENST00000377795 TOP2BQ02880 1626 aa22.38■■□□□ 1.17
CD74-203ENST00000377795 BIVM-ERCC5R4GMW8 1640 aa22.37■■□□□ 1.17
CD74-203ENST00000377795 SYNJ1O43426 1573 aa22.33■■□□□ 1.17
CD74-203ENST00000377795 CHIC1Q5VXU3 224 aa22.31■■□□□ 1.16
CD74-203ENST00000377795 TRIM41Q8WV44 630 aa22.31■■□□□ 1.16
CD74-203ENST00000377795 CUX2O14529 1486 aa22.29■■□□□ 1.16
CD74-203ENST00000377795 FGD5Q6ZNL6 1462 aa22.26■■□□□ 1.15
CD74-203ENST00000377795 POLA1P09884 1462 aaPredicted RBP22.24■■□□□ 1.15
CD74-203ENST00000377795 SOGA1O94964 1423 aa22.2■■□□□ 1.14
CD74-203ENST00000377795 IFT140Q96RY7 1462 aa22.2■■□□□ 1.14
CD74-203ENST00000377795 TARBP1Q13395 1621 aaKnown RBP22.11■■□□□ 1.13
CD74-203ENST00000377795 ABCA10Q8WWZ4 1543 aa22.11■■□□□ 1.13
CD74-203ENST00000377795 RAD54L2Q9Y4B4 1467 aa22.09■■□□□ 1.13
CD74-203ENST00000377795 WDR97A6NE52 1622 aa22.09■■□□□ 1.13
CD74-203ENST00000377795 KIF27Q86VH2 1401 aa22.01■■□□□ 1.11
CD74-203ENST00000377795 EEA1Q15075 1411 aa21.98■■□□□ 1.11
CD74-203ENST00000377795 TDRD9Q8NDG6 1382 aaKnown RBP21.96■■□□□ 1.11
CD74-203ENST00000377795 ZNF608Q9ULD9 1512 aaPredicted RBP21.95■■□□□ 1.1
CD74-203ENST00000377795 ABCA5Q8WWZ7 1642 aa21.95■■□□□ 1.1
CD74-203ENST00000377795 GAPVD1Q14C86 1478 aa21.94■■□□□ 1.1
CD74-203ENST00000377795 EIF4G3O43432 1585 aaKnown RBP21.92■■□□□ 1.1
CD74-203ENST00000377795 AQRO60306 1485 aaKnown RBP eCLIP21.9■■□□□ 1.1
CD74-203ENST00000377795 GRIN2BQ13224 1484 aa21.9■■□□□ 1.1
CD74-203ENST00000377795 ERICH3Q5RHP9 1530 aa21.88■■□□□ 1.09
CD74-203ENST00000377795 PBRM1Q86U86 1689 aa21.82■■□□□ 1.08
CD74-203ENST00000377795 RUSC2Q8N2Y8 1516 aa21.82■■□□□ 1.08
CD74-203ENST00000377795 IGF1RP08069 1367 aa21.82■■□□□ 1.08
CD74-203ENST00000377795 CSRNP3Q8WYN3 585 aa21.81■■□□□ 1.08
CD74-203ENST00000377795 MAGI1Q96QZ7 1491 aaPredicted RBP21.79■■□□□ 1.08
CD74-203ENST00000377795 CUL7Q14999 1698 aa21.77■■□□□ 1.08
CD74-203ENST00000377795 SNAPC4Q5SXM2 1469 aa21.74■■□□□ 1.07
CD74-203ENST00000377795 FHAD1B1AJZ9 1412 aa21.73■■□□□ 1.07
CD74-203ENST00000377795 FAM9AQ8IZU1 332 aaPredicted RBP21.73■■□□□ 1.07
CD74-203ENST00000377795 CARMIL1Q5VZK9 1371 aa21.72■■□□□ 1.07
CD74-203ENST00000377795 ADAMTS12P58397 1594 aa21.7■■□□□ 1.06
CD74-203ENST00000377795 SYNJ2O15056 1496 aa21.69■■□□□ 1.06
CD74-203ENST00000377795 PRXQ9BXM0 1461 aa21.68■■□□□ 1.06
CD74-203ENST00000377795 RAPGEF2Q9Y4G8 1499 aa21.65■■□□□ 1.06
CD74-203ENST00000377795 CHMP7Q8WUX9 453 aaPredicted RBP21.64■■□□□ 1.05
CD74-203ENST00000377795 KIF21BO75037 1637 aa21.63■■□□□ 1.05
CD74-203ENST00000377795 GRIN2AQ12879 1464 aa21.58■■□□□ 1.05
CD74-203ENST00000377795 FBLN2P98095 1184 aa21.57■■□□□ 1.04
CD74-203ENST00000377795 GOLGA3Q08378 1498 aa21.55■■□□□ 1.04
CD74-203ENST00000377795 CHD1O14646 1710 aa21.52■■□□□ 1.03
CD74-203ENST00000377795 NUP160Q12769 1436 aa21.47■■□□□ 1.03
CD74-203ENST00000377795 OSCARQ8IYS5 282 aa21.45■■□□□ 1.02
CD74-203ENST00000377795 UBTFP17480 764 aaKnown RBP21.44■■□□□ 1.02
CD74-203ENST00000377795 KIAA0586Q9BVV6 1533 aa21.42■■□□□ 1.02
CD74-203ENST00000377795 CEP170Q5SW79 1584 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms