Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 SLC6A8-207ENST00000466243 544 ntTSL 216.21■□□□□ 0.196e-12■■□□□ 11.8
DDX52Q9Y2R4 RREB1-207ENST00000475946 9067 ntTSL 1 (best)8.7□□□□□ -1.021e-6■■□□□ 11.7
DDX52Q9Y2R4 TMEM242-202ENST00000400788 4043 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.712e-10■■□□□ 11.7
DDX52Q9Y2R4 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.091e-6■■□□□ 11.7
DDX52Q9Y2R4 FGFR3-209ENST00000507588 336 ntTSL 1 (best)22.26■■□□□ 1.158e-7■■□□□ 11.7
DDX52Q9Y2R4 FGFR3-207ENST00000474521 545 ntTSL 220.97■□□□□ 0.958e-7■■□□□ 11.7
DDX52Q9Y2R4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.015e-7■■□□□ 11.6
DDX52Q9Y2R4 LRRC27-209ENST00000475747 2660 ntTSL 219.21■□□□□ 0.675e-7■■□□□ 11.6
DDX52Q9Y2R4 LRRC27-202ENST00000368612 1765 ntTSL 2 BASIC14.25□□□□□ -0.135e-7■■□□□ 11.6
DDX52Q9Y2R4 LRRC27-206ENST00000462656 2302 ntTSL 212.42□□□□□ -0.425e-7■■□□□ 11.6
DDX52Q9Y2R4 LRRC27-208ENST00000472556 646 ntTSL 1 (best)11.15□□□□□ -0.625e-7■■□□□ 11.6
DDX52Q9Y2R4 LRRC27-204ENST00000368614 6374 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.755e-7■■□□□ 11.6
DDX52Q9Y2R4 HMGN2-202ENST00000460563 1045 ntTSL 512.83□□□□□ -0.362e-20■■□□□ 11.6
DDX52Q9Y2R4 HMGN2-204ENST00000464888 565 ntTSL 212.61□□□□□ -0.392e-20■■□□□ 11.6
DDX52Q9Y2R4 HMGN2-203ENST00000463817 853 ntTSL 210.29□□□□□ -0.762e-20■■□□□ 11.6
DDX52Q9Y2R4 HMGN2-208ENST00000479815 1030 ntTSL 510.29□□□□□ -0.762e-20■■□□□ 11.6
DDX52Q9Y2R4 HMGN2-206ENST00000467700 932 ntTSL 28.84□□□□□ -0.992e-20■■□□□ 11.6
DDX52Q9Y2R4 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.082e-20■■□□□ 11.6
DDX52Q9Y2R4 HMGN2-207ENST00000468388 320 ntTSL 38.28□□□□□ -1.082e-20■■□□□ 11.6
DDX52Q9Y2R4 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.52e-20■■□□□ 11.6
DDX52Q9Y2R4 FLNB-204ENST00000429972 9430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.582e-6■■□□□ 11.6
DDX52Q9Y2R4 FLNB-201ENST00000295956 9463 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.582e-6■■□□□ 11.6
DDX52Q9Y2R4 FLNB-202ENST00000358537 9391 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.712e-6■■□□□ 11.6
DDX52Q9Y2R4 FLNB-212ENST00000490882 8079 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.792e-6■■□□□ 11.6
DDX52Q9Y2R4 RELT-206ENST00000545687 586 ntTSL 426.87■■□□□ 1.891e-7■■□□□ 11.6
DDX52Q9Y2R4 RELT-205ENST00000544075 744 ntTSL 326.28■■□□□ 1.81e-7■■□□□ 11.6
DDX52Q9Y2R4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.221e-7■■□□□ 11.6
DDX52Q9Y2R4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.511e-7■■□□□ 11.6
DDX52Q9Y2R4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.332e-11■■□□□ 11.6
DDX52Q9Y2R4 AL669831.3-209ENST00000440200 413 ntTSL 56.11□□□□□ -1.438e-36■■□□□ 11.5
DDX52Q9Y2R4 AL669831.3-203ENST00000419394 491 ntTSL 54□□□□□ -1.778e-36■■□□□ 11.5
DDX52Q9Y2R4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.52e-18■■□□□ 11.5
DDX52Q9Y2R4 GNB1-204ENST00000439272 602 ntTSL 511.33□□□□□ -0.63e-7■■□□□ 11.5
DDX52Q9Y2R4 SEPT5-207ENST00000431044 3173 ntTSL 1 (best)18.25■□□□□ 0.512e-6■■□□□ 11.5
DDX52Q9Y2R4 FASN-210ENST00000636968 100 ntTSL 520.05■□□□□ 0.86e-20■■□□□ 11.5
DDX52Q9Y2R4 FASN-208ENST00000635733 100 ntTSL 510.28□□□□□ -0.766e-20■■□□□ 11.5
DDX52Q9Y2R4 HNRNPF-206ENST00000498176 715 ntTSL 1 (best)26.51■■□□□ 1.834e-13■■□□□ 11.4
DDX52Q9Y2R4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.544e-13■■□□□ 11.4
DDX52Q9Y2R4 HNRNPF-205ENST00000477108 636 ntTSL 1 (best)18.39■□□□□ 0.534e-13■■□□□ 11.4
DDX52Q9Y2R4 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.114e-13■■□□□ 11.4
DDX52Q9Y2R4 KIAA1211-207ENST00000629263 830 ntAPPRIS ALT2 TSL 530.67■■■□□ 2.53e-7■■□□□ 11.4
DDX52Q9Y2R4 CD81-214ENST00000530239 425 ntTSL 229.06■■■□□ 2.245e-6■■□□□ 11.4
DDX52Q9Y2R4 MBD3-211ENST00000592965 568 ntTSL 427.67■■■□□ 2.025e-6■■□□□ 11.4
DDX52Q9Y2R4 CD81-203ENST00000464784 794 ntTSL 525.94■■□□□ 1.745e-6■■□□□ 11.4
DDX52Q9Y2R4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.485e-6■■□□□ 11.4
DDX52Q9Y2R4 KIAA1211-208ENST00000636006 1662 ntAPPRIS ALT2 TSL 524.29■■□□□ 1.483e-7■■□□□ 11.4
DDX52Q9Y2R4 KIF2A-207ENST00000509663 759 ntTSL 323.19■■□□□ 1.35e-6■■□□□ 11.4
DDX52Q9Y2R4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC22.1■■□□□ 1.135e-6■■□□□ 11.4
DDX52Q9Y2R4 CD81-211ENST00000524805 982 ntTSL 521.65■■□□□ 1.065e-6■■□□□ 11.4
DDX52Q9Y2R4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.65■■□□□ 1.065e-6■■□□□ 11.4
DDX52Q9Y2R4 CD81-208ENST00000492252 1136 ntTSL 321.15■□□□□ 0.985e-6■■□□□ 11.4
DDX52Q9Y2R4 CD81-213ENST00000527343 720 ntTSL 321■□□□□ 0.955e-6■■□□□ 11.4
DDX52Q9Y2R4 MBD3-210ENST00000592361 907 ntTSL 520.15■□□□□ 0.825e-6■■□□□ 11.4
DDX52Q9Y2R4 MBD3-204ENST00000585967 583 ntTSL 420.15■□□□□ 0.825e-6■■□□□ 11.4
DDX52Q9Y2R4 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.47■□□□□ 0.715e-6■■□□□ 11.4
DDX52Q9Y2R4 GET4-205ENST00000441491 682 ntTSL 518.11■□□□□ 0.493e-7■■□□□ 11.4
DDX52Q9Y2R4 CD81-210ENST00000493525 396 ntTSL 518.09■□□□□ 0.495e-6■■□□□ 11.4
DDX52Q9Y2R4 MAEA-204ENST00000503162 2069 ntTSL 217.72■□□□□ 0.433e-7■■□□□ 11.4
DDX52Q9Y2R4 MAEA-220ENST00000515766 3136 ntTSL 217.03■□□□□ 0.323e-7■■□□□ 11.4
DDX52Q9Y2R4 CD81-209ENST00000492627 886 ntTSL 3 BASIC16.56■□□□□ 0.245e-6■■□□□ 11.4
DDX52Q9Y2R4 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.065e-6■■□□□ 11.4
DDX52Q9Y2R4 DNAJC5-202ENST00000470551 5287 ntTSL 214.95□□□□□ -0.025e-6■■□□□ 11.4
DDX52Q9Y2R4 KIF2A-201ENST00000381103 3360 ntTSL 1 (best) BASIC12.08□□□□□ -0.485e-6■■□□□ 11.4
DDX52Q9Y2R4 KIF2A-204ENST00000504883 783 ntTSL 210.85□□□□□ -0.675e-6■■□□□ 11.4
DDX52Q9Y2R4 RNA5SP161-201ENST00000363871 115 ntBASIC9.25□□□□□ -0.933e-7■■□□□ 11.4
DDX52Q9Y2R4 KIF2A-210ENST00000514082 874 ntTSL 1 (best)7.59□□□□□ -1.195e-6■■□□□ 11.4
DDX52Q9Y2R4 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.19□□□□□ -1.425e-6■■□□□ 11.4
DDX52Q9Y2R4 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC13.39□□□□□ -0.272e-6■□□□□ 11.3
DDX52Q9Y2R4 RNA5SP298-201ENST00000364991 111 ntBASIC11.64□□□□□ -0.552e-6■□□□□ 11.3
DDX52Q9Y2R4 DIP2C-201ENST00000280886 7888 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.722e-6■□□□□ 11.3
DDX52Q9Y2R4 DIP2C-202ENST00000381496 7749 ntTSL 5 BASIC10.57□□□□□ -0.722e-6■□□□□ 11.3
DDX52Q9Y2R4 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.764e-8■□□□□ 11.3
DDX52Q9Y2R4 GPI-208ENST00000588991 2021 ntTSL 223.89■■□□□ 1.424e-8■□□□□ 11.3
DDX52Q9Y2R4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.61■□□□□ 0.414e-8■□□□□ 11.3
DDX52Q9Y2R4 GPI-202ENST00000415930 4000 ntTSL 2 BASIC9□□□□□ -0.974e-8■□□□□ 11.3
DDX52Q9Y2R4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.981e-16■□□□□ 11.3
DDX52Q9Y2R4 GMPR-203ENST00000543191 675 ntTSL 212.19□□□□□ -0.461e-16■□□□□ 11.3
DDX52Q9Y2R4 KMT5A-209ENST00000537270 352 ntTSL 520.54■□□□□ 0.885e-7■□□□□ 11.3
DDX52Q9Y2R4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.615e-7■□□□□ 11.3
DDX52Q9Y2R4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.315e-7■□□□□ 11.3
DDX52Q9Y2R4 KMT5A-204ENST00000437519 1774 ntTSL 215.04■□□□□ -05e-7■□□□□ 11.3
DDX52Q9Y2R4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.233e-6■□□□□ 11.2
DDX52Q9Y2R4 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC14.44□□□□□ -0.13e-6■□□□□ 11.2
DDX52Q9Y2R4 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC14.23□□□□□ -0.133e-6■□□□□ 11.2
DDX52Q9Y2R4 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.873e-6■□□□□ 11.2
DDX52Q9Y2R4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.174e-6■□□□□ 11.2
DDX52Q9Y2R4 DIDO1-205ENST00000370371 2833 ntTSL 1 (best) BASIC14.43□□□□□ -0.14e-6■□□□□ 11.2
DDX52Q9Y2R4 MIDN-202ENST00000586757 1163 ntAPPRIS ALT2 TSL 528.97■■■□□ 2.236e-6■□□□□ 11.2
DDX52Q9Y2R4 INTS11-223ENST00000498173 1589 ntTSL 225.6■■□□□ 1.692e-11■□□□□ 11.2
DDX52Q9Y2R4 MIDN-203ENST00000586843 416 ntTSL 225.14■■□□□ 1.626e-6■□□□□ 11.2
DDX52Q9Y2R4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC25■■□□□ 1.594e-7■□□□□ 11.2
DDX52Q9Y2R4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC24.87■■□□□ 1.572e-11■□□□□ 11.2
DDX52Q9Y2R4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.52■■□□□ 1.362e-11■□□□□ 11.2
DDX52Q9Y2R4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.324e-7■□□□□ 11.2
DDX52Q9Y2R4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC23.27■■□□□ 1.322e-11■□□□□ 11.2
DDX52Q9Y2R4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.32e-11■□□□□ 11.2
DDX52Q9Y2R4 INTS11-220ENST00000493534 896 ntTSL 323.11■■□□□ 1.292e-11■□□□□ 11.2
DDX52Q9Y2R4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.294e-7■□□□□ 11.2
DDX52Q9Y2R4 INTS11-235ENST00000527719 750 ntTSL 522.98■■□□□ 1.272e-11■□□□□ 11.2
DDX52Q9Y2R4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC22.75■■□□□ 1.232e-11■□□□□ 11.2
Retrieved 100 of 4,483 protein–RNA pairs in 64.2 ms