Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC9.17□□□□□ -0.94
SYNE2Q8WXH0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC9.17□□□□□ -0.94
SYNE2Q8WXH0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SYNE2Q8WXH0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC9.17□□□□□ -0.94
SYNE2Q8WXH0 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SYNE2Q8WXH0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC9.17□□□□□ -0.94
SYNE2Q8WXH0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC9.17□□□□□ -0.94
SYNE2Q8WXH0 FAM197Y4-202ENST00000622692 608 ntBASIC9.17□□□□□ -0.94
SYNE2Q8WXH0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SYNE2Q8WXH0 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
SYNE2Q8WXH0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC9.17□□□□□ -0.94
SYNE2Q8WXH0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SYNE2Q8WXH0 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SYNE2Q8WXH0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC9.17□□□□□ -0.94
SYNE2Q8WXH0 AC141586.4-201ENST00000624558 1573 ntBASIC9.17□□□□□ -0.94
SYNE2Q8WXH0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SYNE2Q8WXH0 DUSP5P1-201ENST00000441325 1139 ntBASIC9.17□□□□□ -0.94
SYNE2Q8WXH0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SYNE2Q8WXH0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SYNE2Q8WXH0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
SYNE2Q8WXH0 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
SYNE2Q8WXH0 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC9.16□□□□□ -0.94
SYNE2Q8WXH0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC9.16□□□□□ -0.94
SYNE2Q8WXH0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
SYNE2Q8WXH0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SYNE2Q8WXH0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC9.16□□□□□ -0.94
SYNE2Q8WXH0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
SYNE2Q8WXH0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC9.16□□□□□ -0.94
SYNE2Q8WXH0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
SYNE2Q8WXH0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SYNE2Q8WXH0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC9.16□□□□□ -0.94
SYNE2Q8WXH0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC9.16□□□□□ -0.94
SYNE2Q8WXH0 AC087499.1-201ENST00000418141 1075 ntBASIC9.16□□□□□ -0.94
SYNE2Q8WXH0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC9.16□□□□□ -0.94
SYNE2Q8WXH0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
SYNE2Q8WXH0 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
SYNE2Q8WXH0 MIR4785-201ENST00000585005 73 ntBASIC9.16□□□□□ -0.94
SYNE2Q8WXH0 AC023511.2-201ENST00000618803 211 ntBASIC9.16□□□□□ -0.94
SYNE2Q8WXH0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SYNE2Q8WXH0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC9.15□□□□□ -0.94
SYNE2Q8WXH0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SYNE2Q8WXH0 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SYNE2Q8WXH0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC9.15□□□□□ -0.94
SYNE2Q8WXH0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SYNE2Q8WXH0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SYNE2Q8WXH0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
SYNE2Q8WXH0 RPPH1-201ENST00000516869 333 ntBASIC9.15□□□□□ -0.94
SYNE2Q8WXH0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
SYNE2Q8WXH0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC9.15□□□□□ -0.94
SYNE2Q8WXH0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SYNE2Q8WXH0 KRT18P48-201ENST00000434763 852 ntBASIC9.15□□□□□ -0.94
SYNE2Q8WXH0 PENK-204ENST00000518770 863 ntTSL 2 BASIC9.15□□□□□ -0.94
SYNE2Q8WXH0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC9.15□□□□□ -0.94
SYNE2Q8WXH0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
SYNE2Q8WXH0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SYNE2Q8WXH0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SYNE2Q8WXH0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SYNE2Q8WXH0 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC9.15□□□□□ -0.95
SYNE2Q8WXH0 UPK3BP1-201ENST00000428678 509 ntBASIC9.15□□□□□ -0.95
SYNE2Q8WXH0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC9.15□□□□□ -0.95
SYNE2Q8WXH0 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC9.15□□□□□ -0.95
SYNE2Q8WXH0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SYNE2Q8WXH0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC9.14□□□□□ -0.95
SYNE2Q8WXH0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
SYNE2Q8WXH0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
SYNE2Q8WXH0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SYNE2Q8WXH0 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SYNE2Q8WXH0 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
SYNE2Q8WXH0 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SYNE2Q8WXH0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
SYNE2Q8WXH0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SYNE2Q8WXH0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC9.14□□□□□ -0.95
SYNE2Q8WXH0 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
SYNE2Q8WXH0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC9.14□□□□□ -0.95
SYNE2Q8WXH0 AL031963.3-201ENST00000606441 850 ntBASIC9.14□□□□□ -0.95
SYNE2Q8WXH0 AC006557.6-201ENST00000623071 864 ntBASIC9.14□□□□□ -0.95
SYNE2Q8WXH0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
SYNE2Q8WXH0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC9.14□□□□□ -0.95
SYNE2Q8WXH0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC9.14□□□□□ -0.95
SYNE2Q8WXH0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
SYNE2Q8WXH0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC9.14□□□□□ -0.95
SYNE2Q8WXH0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC9.14□□□□□ -0.95
SYNE2Q8WXH0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC9.14□□□□□ -0.95
SYNE2Q8WXH0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC9.14□□□□□ -0.95
SYNE2Q8WXH0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
SYNE2Q8WXH0 FOXO3B-201ENST00000395675 1928 ntBASIC9.14□□□□□ -0.95
SYNE2Q8WXH0 CRYGFP-201ENST00000418459 633 ntBASIC9.14□□□□□ -0.95
SYNE2Q8WXH0 NMU-205ENST00000511469 756 ntTSL 3 BASIC9.14□□□□□ -0.95
SYNE2Q8WXH0 NTF6B-201ENST00000591913 560 ntBASIC9.14□□□□□ -0.95
SYNE2Q8WXH0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
SYNE2Q8WXH0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SYNE2Q8WXH0 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SYNE2Q8WXH0 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC9.13□□□□□ -0.95
SYNE2Q8WXH0 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
SYNE2Q8WXH0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC9.13□□□□□ -0.95
SYNE2Q8WXH0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC9.13□□□□□ -0.95
SYNE2Q8WXH0 AC008403.3-201ENST00000598924 454 ntBASIC9.13□□□□□ -0.95
SYNE2Q8WXH0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SYNE2Q8WXH0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SYNE2Q8WXH0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms