Protein–RNA interactions for Protein: Q8NHY6

ZFP28, Zinc finger protein 28 homolog, humanhuman

Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFP28Q8NHY6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ZFP28Q8NHY6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZFP28Q8NHY6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ZFP28Q8NHY6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZFP28Q8NHY6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
ZFP28Q8NHY6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZFP28Q8NHY6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZFP28Q8NHY6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ZFP28Q8NHY6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZFP28Q8NHY6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.11■□□□□ 0.97
ZFP28Q8NHY6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.11■□□□□ 0.97
ZFP28Q8NHY6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ZFP28Q8NHY6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZFP28Q8NHY6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ZFP28Q8NHY6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZFP28Q8NHY6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZFP28Q8NHY6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZFP28Q8NHY6 AC073130.3-201ENST00000624389 2278 ntBASIC21.11■□□□□ 0.97
ZFP28Q8NHY6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZFP28Q8NHY6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZFP28Q8NHY6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZFP28Q8NHY6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.1■□□□□ 0.97
ZFP28Q8NHY6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZFP28Q8NHY6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZFP28Q8NHY6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.1■□□□□ 0.97
ZFP28Q8NHY6 AL451085.2-201ENST00000605085 799 ntBASIC21.1■□□□□ 0.97
ZFP28Q8NHY6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZFP28Q8NHY6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZFP28Q8NHY6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZFP28Q8NHY6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZFP28Q8NHY6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.09■□□□□ 0.97
ZFP28Q8NHY6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.09■□□□□ 0.97
ZFP28Q8NHY6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
ZFP28Q8NHY6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.09■□□□□ 0.97
ZFP28Q8NHY6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.09■□□□□ 0.97
ZFP28Q8NHY6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
ZFP28Q8NHY6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZFP28Q8NHY6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.08■□□□□ 0.97
ZFP28Q8NHY6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
ZFP28Q8NHY6 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
ZFP28Q8NHY6 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
ZFP28Q8NHY6 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
ZFP28Q8NHY6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ZFP28Q8NHY6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ZFP28Q8NHY6 AC144652.1-201ENST00000609974 1624 ntBASIC21.07■□□□□ 0.96
ZFP28Q8NHY6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZFP28Q8NHY6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.07■□□□□ 0.96
ZFP28Q8NHY6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZFP28Q8NHY6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZFP28Q8NHY6 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.07■□□□□ 0.96
ZFP28Q8NHY6 AC010997.5-201ENST00000609182 354 ntBASIC21.07■□□□□ 0.96
ZFP28Q8NHY6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.07■□□□□ 0.96
ZFP28Q8NHY6 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZFP28Q8NHY6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.07■□□□□ 0.96
ZFP28Q8NHY6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.07■□□□□ 0.96
ZFP28Q8NHY6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZFP28Q8NHY6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
ZFP28Q8NHY6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZFP28Q8NHY6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZFP28Q8NHY6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZFP28Q8NHY6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
ZFP28Q8NHY6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZFP28Q8NHY6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZFP28Q8NHY6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZFP28Q8NHY6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZFP28Q8NHY6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZFP28Q8NHY6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZFP28Q8NHY6 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.06■□□□□ 0.96
ZFP28Q8NHY6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZFP28Q8NHY6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.06■□□□□ 0.96
ZFP28Q8NHY6 TSPY9P-201ENST00000440215 945 ntBASIC21.06■□□□□ 0.96
ZFP28Q8NHY6 TSPY11P-201ENST00000442607 1045 ntBASIC21.06■□□□□ 0.96
ZFP28Q8NHY6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZFP28Q8NHY6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZFP28Q8NHY6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.06■□□□□ 0.96
ZFP28Q8NHY6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZFP28Q8NHY6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZFP28Q8NHY6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZFP28Q8NHY6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZFP28Q8NHY6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
ZFP28Q8NHY6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZFP28Q8NHY6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
ZFP28Q8NHY6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZFP28Q8NHY6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZFP28Q8NHY6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZFP28Q8NHY6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
ZFP28Q8NHY6 AL353803.4-201ENST00000565882 1934 ntBASIC21.05■□□□□ 0.96
ZFP28Q8NHY6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
ZFP28Q8NHY6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZFP28Q8NHY6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZFP28Q8NHY6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.04■□□□□ 0.96
ZFP28Q8NHY6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZFP28Q8NHY6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZFP28Q8NHY6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.04■□□□□ 0.96
ZFP28Q8NHY6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZFP28Q8NHY6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
ZFP28Q8NHY6 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZFP28Q8NHY6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.04■□□□□ 0.96
ZFP28Q8NHY6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.04■□□□□ 0.96
ZFP28Q8NHY6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms