Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 AC092384.3-202ENST00000564646 2873 ntBASIC15.11■□□□□ 0.014e-7■■■■□ 20.7
LSM11P83369 BSG-212ENST00000590218 545 ntTSL 217.13■□□□□ 0.331e-6■■■■□ 20.6
LSM11P83369 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.242e-6■■■■□ 20.6
LSM11P83369 DEAF1-208ENST00000527658 691 ntTSL 216.73■□□□□ 0.272e-6■■■■□ 20.6
LSM11P83369 DEAF1-207ENST00000527170 1623 ntTSL 1 (best)14.92□□□□□ -0.022e-6■■■■□ 20.6
LSM11P83369 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.92□□□□□ -0.182e-6■■■■□ 20.6
LSM11P83369 OSBPL7-202ENST00000392507 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.482e-6■■■■□ 20.6
LSM11P83369 OSBPL7-208ENST00000583167 4497 ntTSL 211.61□□□□□ -0.552e-6■■■■□ 20.6
LSM11P83369 UBR4-207ENST00000425413 2954 ntTSL 210.96□□□□□ -0.662e-6■■■■□ 20.6
LSM11P83369 OSBPL7-201ENST00000007414 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.682e-6■■■■□ 20.6
LSM11P83369 OSBPL7-204ENST00000579728 4104 ntTSL 59.71□□□□□ -0.862e-6■■■■□ 20.6
LSM11P83369 STARD9-203ENST00000562619 7237 ntTSL 1 (best)7.65□□□□□ -1.185e-6■■■■□ 20.6
LSM11P83369 LAMTOR5-AS1-238ENST00000626572 1044 ntTSL 57.41□□□□□ -1.221e-7■■■■□ 20.6
LSM11P83369 AL355488.2-201ENST00000609909 2850 ntBASIC6.82□□□□□ -1.321e-7■■■■□ 20.6
LSM11P83369 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.655e-6■■■■□ 20.6
LSM11P83369 COL9A2-204ENST00000427563 548 ntTSL 316.68■□□□□ 0.261e-6■■■■□ 20.6
LSM11P83369 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.282e-8■■■■□ 20.6
LSM11P83369 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.092e-7■■■■□ 20.6
LSM11P83369 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.072e-7■■■■□ 20.6
LSM11P83369 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.262e-7■■■■□ 20.6
LSM11P83369 FUS-211ENST00000568901 521 ntTSL 29.94□□□□□ -0.822e-10■■■■□ 20.6
LSM11P83369 RPL36-204ENST00000579446 452 ntTSL 2 BASIC9.54□□□□□ -0.882e-7■■■■□ 20.6
LSM11P83369 RPL36-205ENST00000579649 449 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.042e-7■■■■□ 20.6
LSM11P83369 LRRC8D-205ENST00000525774 588 ntTSL 420.9■□□□□ 0.942e-23■■■■□ 20.6
LSM11P83369 LARP4B-205ENST00000448368 1438 ntTSL 420.1■□□□□ 0.812e-12■■■■□ 20.6
LSM11P83369 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.252e-23■■■■□ 20.6
LSM11P83369 LRRC8D-204ENST00000441269 905 ntTSL 313.49□□□□□ -0.252e-23■■■■□ 20.6
LSM11P83369 LRRC8D-206ENST00000527156 922 ntTSL 210.68□□□□□ -0.72e-23■■■■□ 20.6
LSM11P83369 LRRC8D-203ENST00000414841 666 ntTSL 310.56□□□□□ -0.722e-23■■■■□ 20.6
LSM11P83369 LRRC8D-207ENST00000532201 597 ntTSL 49.64□□□□□ -0.872e-23■■■■□ 20.6
LSM11P83369 LRRC8D-202ENST00000394593 3345 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.952e-23■■■■□ 20.6
LSM11P83369 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.381e-6■■■■□ 20.5
LSM11P83369 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.64■□□□□ 0.091e-6■■■■□ 20.5
LSM11P83369 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.44■□□□□ 0.061e-6■■■■□ 20.5
LSM11P83369 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.11■□□□□ 0.011e-6■■■■□ 20.5
LSM11P83369 BSG-210ENST00000576925 611 ntTSL 214.98□□□□□ -0.011e-6■■■■□ 20.5
LSM11P83369 BSG-207ENST00000573216 545 ntTSL 414.98□□□□□ -0.011e-6■■■■□ 20.5
LSM11P83369 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.63□□□□□ -0.071e-6■■■■□ 20.5
LSM11P83369 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.19□□□□□ -0.141e-6■■■■□ 20.5
LSM11P83369 BSG-213ENST00000613627 689 ntTSL 313.95□□□□□ -0.181e-6■■■■□ 20.5
LSM11P83369 BSG-206ENST00000572899 582 ntTSL 213.9□□□□□ -0.181e-6■■■■□ 20.5
LSM11P83369 CBFA2T3-211ENST00000570046 284 ntTSL 38.52□□□□□ -1.058e-7■■■■□ 20.5
LSM11P83369 HNRNPU-228ENST00000640306 2917 ntTSL 515.77■□□□□ 0.124e-6■■■■□ 20.5
LSM11P83369 HNRNPU-217ENST00000638952 5678 ntTSL 515.34■□□□□ 0.054e-6■■■■□ 20.5
LSM11P83369 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.074e-6■■■■□ 20.5
LSM11P83369 HNRNPU-209ENST00000476241 4844 ntTSL 514.46□□□□□ -0.094e-6■■■■□ 20.5
LSM11P83369 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.14e-6■■■■□ 20.5
LSM11P83369 HNRNPU-214ENST00000638475 2698 ntTSL 513.54□□□□□ -0.244e-6■■■■□ 20.5
LSM11P83369 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.344e-6■■■■□ 20.5
LSM11P83369 HNRNPU-229ENST00000640440 871 ntTSL 312.42□□□□□ -0.424e-6■■■■□ 20.5
LSM11P83369 HNRNPU-224ENST00000640056 2045 ntTSL 59.39□□□□□ -0.914e-6■■■■□ 20.5
LSM11P83369 NBEAL2-201ENST00000416683 6364 ntTSL 1 (best)14.63□□□□□ -0.075e-7■■■■□ 20.5
LSM11P83369 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.185e-7■■■■□ 20.5
LSM11P83369 NBEAL2-204ENST00000443829 3508 ntTSL 1 (best)13.36□□□□□ -0.275e-7■■■■□ 20.5
LSM11P83369 FTCD-209ENST00000483568 398 ntTSL 59.7□□□□□ -0.863e-9■■■■□ 20.4
LSM11P83369 AC087482.1-202ENST00000558071 903 ntTSL 5 BASIC10.03□□□□□ -0.87e-12■■■■□ 20.3
LSM11P83369 AC087482.1-201ENST00000558097 540 ntTSL 46.49□□□□□ -1.377e-12■■■■□ 20.3
LSM11P83369 FNBP4-210ENST00000531394 605 ntTSL 310.12□□□□□ -0.798e-7■■■■□ 20.3
LSM11P83369 FNBP4-204ENST00000525792 840 ntTSL 38.7□□□□□ -1.028e-7■■■■□ 20.3
LSM11P83369 CLCN7-209ENST00000565092 2740 ntTSL 215.64■□□□□ 0.095e-7■■■■□ 20.3
LSM11P83369 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.165e-7■■■■□ 20.3
LSM11P83369 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.28□□□□□ -0.285e-7■■■■□ 20.3
LSM11P83369 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.74□□□□□ -0.375e-7■■■■□ 20.3
LSM11P83369 CLCN7-205ENST00000563642 4184 ntTSL 212.72□□□□□ -0.375e-7■■■■□ 20.3
LSM11P83369 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.341e-6■■■■□ 20.3
LSM11P83369 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.391e-6■■■■□ 20.3
LSM11P83369 MAT2A-201ENST00000306434 2819 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.992e-11■■■■□ 20.3
LSM11P83369 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.174e-7■■■■□ 20.3
LSM11P83369 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.36■■□□□ 1.014e-7■■■■□ 20.3
LSM11P83369 ATG16L2-202ENST00000435507 2254 ntTSL 220.52■□□□□ 0.884e-7■■■■□ 20.3
LSM11P83369 ATG16L2-212ENST00000538973 1456 ntTSL 518.34■□□□□ 0.534e-7■■■■□ 20.3
LSM11P83369 ATG16L2-207ENST00000536995 4577 ntTSL 215.54■□□□□ 0.084e-7■■■■□ 20.3
LSM11P83369 ATG16L2-220ENST00000544490 3731 ntTSL 214.35□□□□□ -0.114e-7■■■■□ 20.3
LSM11P83369 ATG16L2-215ENST00000541367 1575 ntTSL 513.66□□□□□ -0.224e-7■■■■□ 20.3
LSM11P83369 ATG16L2-203ENST00000439504 3841 ntTSL 1 (best)13.16□□□□□ -0.34e-7■■■■□ 20.3
LSM11P83369 ATG16L2-213ENST00000540222 1400 ntTSL 513.05□□□□□ -0.324e-7■■■■□ 20.3
LSM11P83369 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.062e-8■■■■□ 20.3
LSM11P83369 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.57■□□□□ 0.882e-8■■■■□ 20.3
LSM11P83369 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.672e-8■■■■□ 20.3
LSM11P83369 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.652e-8■■■■□ 20.3
LSM11P83369 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.642e-8■■■■□ 20.3
LSM11P83369 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.522e-8■■■■□ 20.3
LSM11P83369 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.73■□□□□ 0.272e-8■■■■□ 20.3
LSM11P83369 SATB2-204ENST00000440919 2166 ntTSL 1 (best)16.64■□□□□ 0.252e-8■■■■□ 20.3
LSM11P83369 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.162e-8■■■■□ 20.3
LSM11P83369 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.152e-8■■■■□ 20.3
LSM11P83369 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.052e-8■■■■□ 20.3
LSM11P83369 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.022e-8■■■■□ 20.3
LSM11P83369 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.49□□□□□ -0.252e-8■■■■□ 20.3
LSM11P83369 ARID1B-231ENST00000637887 1468 ntTSL 513.48□□□□□ -0.252e-8■■■■□ 20.3
LSM11P83369 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.272e-8■■■■□ 20.3
LSM11P83369 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.54□□□□□ -0.42e-8■■■■□ 20.3
LSM11P83369 ARID1B-201ENST00000319584 2199 ntTSL 212.1□□□□□ -0.472e-8■■■■□ 20.3
LSM11P83369 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.492e-8■■■■□ 20.3
LSM11P83369 UBE2D2-206ENST00000510470 256 ntTSL 211.48□□□□□ -0.572e-8■■■■□ 20.3
LSM11P83369 SUSD1-201ENST00000355396 2861 ntAPPRIS ALT2 TSL 210.35□□□□□ -0.752e-8■■■■□ 20.3
LSM11P83369 ARID1B-235ENST00000638000 1401 ntTSL 59.05□□□□□ -0.962e-8■■■■□ 20.3
LSM11P83369 AL162578.1-201ENST00000406202 378 ntBASIC8.83□□□□□ -12e-8■■■■□ 20.3
LSM11P83369 ARID1B-205ENST00000414678 6528 ntAPPRIS ALT2 TSL 58.05□□□□□ -1.122e-8■■■■□ 20.3
LSM11P83369 ARID1B-206ENST00000452544 4443 ntTSL 26.43□□□□□ -1.382e-8■■■■□ 20.3
Retrieved 100 of 11,495 protein–RNA pairs in 68.9 ms