RNA–Protein interactions for RNA: ENST00000355396.7

SUSD1-201, Transcript of sushi domain containing 1, humanhuman

APPRIS ALT2 TSL 2

Gene SUSD1, Length 2,861 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-201ENST00000355396 NISCHQ9Y2I1 1504 aa27.69■■■□□ 2.02
SUSD1-201ENST00000355396 CCDC180Q9P1Z9 1646 aa24.52■■□□□ 1.52
SUSD1-201ENST00000355396 ABCC9O60706 1549 aa23.47■■□□□ 1.35
SUSD1-201ENST00000355396 ZCCHC6Q5VYS8 1495 aaKnown RBP23.16■■□□□ 1.3
SUSD1-201ENST00000355396 DCAF1Q9Y4B6 1507 aa23.03■■□□□ 1.28
SUSD1-201ENST00000355396 MYO15BQ96JP2 1530 aa23.01■■□□□ 1.27
SUSD1-201ENST00000355396 NACADO15069 1562 aa22.94■■□□□ 1.26
SUSD1-201ENST00000355396 RB1CC1Q8TDY2 1594 aa22.84■■□□□ 1.25
SUSD1-201ENST00000355396 DCAF8L2P0C7V8 631 aa22.72■■□□□ 1.23
SUSD1-201ENST00000355396 UNC13AQ9UPW8 1703 aa22.35■■□□□ 1.17
SUSD1-201ENST00000355396 SCRIBQ14160 1630 aa22.26■■□□□ 1.15
SUSD1-201ENST00000355396 BICRAQ9NZM4 1560 aa22.17■■□□□ 1.14
SUSD1-201ENST00000355396 SHROOM4Q9ULL8 1493 aa22.05■■□□□ 1.12
SUSD1-201ENST00000355396 PABPN1Q86U42 306 aaKnown RBP eCLIP21.93■■□□□ 1.1
SUSD1-201ENST00000355396 EIF4G1Q04637 1599 aaKnown RBP21.52■■□□□ 1.03
SUSD1-201ENST00000355396 CECR2Q9BXF3 1484 aa21.48■■□□□ 1.03
SUSD1-201ENST00000355396 BAZ1AQ9NRL2 1556 aaPredicted RBP21.44■■□□□ 1.02
SUSD1-201ENST00000355396 SMARCA4P51532 1647 aa21.41■■□□□ 1.02
SUSD1-201ENST00000355396 CC2D2AQ9P2K1 1620 aa21.32■■□□□ 1
SUSD1-201ENST00000355396 MROH2BQ7Z745 1585 aa21.31■■□□□ 1
SUSD1-201ENST00000355396 PEG3Q9GZU2 1588 aa21.27■■□□□ 1
SUSD1-201ENST00000355396 DNAJC5BQ9UF47 199 aa21.23■□□□□ 0.99
SUSD1-201ENST00000355396 RSF1Q96T23 1441 aaPredicted RBP21.2■□□□□ 0.99
SUSD1-201ENST00000355396 SMARCA2P51531 1590 aa21.2■□□□□ 0.98
SUSD1-201ENST00000355396 ATAD2BQ9ULI0 1458 aa21.19■□□□□ 0.98
SUSD1-201ENST00000355396 NCAPD3P42695 1498 aa21.16■□□□□ 0.98
SUSD1-201ENST00000355396 HMGXB3Q12766 1538 aa21.1■□□□□ 0.97
SUSD1-201ENST00000355396 WIZO95785 1651 aa21.09■□□□□ 0.97
SUSD1-201ENST00000355396 BAZ1BQ9UIG0 1483 aaKnown RBP20.99■□□□□ 0.95
SUSD1-201ENST00000355396 TOP2AP11388 1531 aaKnown RBP20.93■□□□□ 0.94
SUSD1-201ENST00000355396 SUPT5HO00267 1087 aaKnown RBP20.74■□□□□ 0.91
SUSD1-201ENST00000355396 CCDC88BA6NC98 1476 aa20.65■□□□□ 0.9
SUSD1-201ENST00000355396 LAMC3Q9Y6N6 1575 aa20.54■□□□□ 0.88
SUSD1-201ENST00000355396 CADPSQ9ULU8 1353 aa20.51■□□□□ 0.87
SUSD1-201ENST00000355396 CFTRP13569 1480 aa20.5■□□□□ 0.87
SUSD1-201ENST00000355396 NESP48681 1621 aa20.44■□□□□ 0.86
SUSD1-201ENST00000355396 PRDM2Q13029 1718 aa20.42■□□□□ 0.86
SUSD1-201ENST00000355396 PDS5BQ9NTI5 1447 aa20.33■□□□□ 0.85
SUSD1-201ENST00000355396 KIF21AQ7Z4S6 1674 aa20.26■□□□□ 0.83
SUSD1-201ENST00000355396 FANCD2Q9BXW9 1451 aa20.26■□□□□ 0.83
SUSD1-201ENST00000355396 CEP164Q9UPV0 1460 aa20.19■□□□□ 0.82
SUSD1-201ENST00000355396 ERCC6Q03468 1493 aa20.18■□□□□ 0.82
SUSD1-201ENST00000355396 THOC2Q8NI27 1593 aaKnown RBP20.15■□□□□ 0.82
SUSD1-201ENST00000355396 MRC2Q9UBG0 1479 aa20.12■□□□□ 0.81
SUSD1-201ENST00000355396 WDR62O43379 1518 aa20.08■□□□□ 0.81
SUSD1-201ENST00000355396 URB2Q14146 1524 aaKnown RBP20.06■□□□□ 0.8
SUSD1-201ENST00000355396 ABCC8Q09428 1581 aa20.05■□□□□ 0.8
SUSD1-201ENST00000355396 DNMBPQ6XZF7 1577 aa20.03■□□□□ 0.8
SUSD1-201ENST00000355396 TOPBP1Q92547 1522 aa20■□□□□ 0.79
SUSD1-201ENST00000355396 CUX1P39880 1505 aa19.98■□□□□ 0.79
SUSD1-201ENST00000355396 CUX2O14529 1486 aa19.97■□□□□ 0.79
SUSD1-201ENST00000355396 BIVM-ERCC5R4GMW8 1640 aa19.96■□□□□ 0.79
SUSD1-201ENST00000355396 WRNQ14191 1432 aaPredicted RBP eCLIP19.95■□□□□ 0.79
SUSD1-201ENST00000355396 TOP2BQ02880 1626 aa19.93■□□□□ 0.78
SUSD1-201ENST00000355396 SYNJ1O43426 1573 aa19.91■□□□□ 0.78
SUSD1-201ENST00000355396 POLA1P09884 1462 aaPredicted RBP19.84■□□□□ 0.77
SUSD1-201ENST00000355396 FGD5Q6ZNL6 1462 aa19.83■□□□□ 0.77
SUSD1-201ENST00000355396 IFT140Q96RY7 1462 aa19.79■□□□□ 0.76
SUSD1-201ENST00000355396 TARBP1Q13395 1621 aaKnown RBP19.79■□□□□ 0.76
SUSD1-201ENST00000355396 WDR97A6NE52 1622 aa19.74■□□□□ 0.75
SUSD1-201ENST00000355396 SOGA1O94964 1423 aa19.74■□□□□ 0.75
SUSD1-201ENST00000355396 ABCA10Q8WWZ4 1543 aa19.71■□□□□ 0.75
SUSD1-201ENST00000355396 RAD54L2Q9Y4B4 1467 aa19.7■□□□□ 0.74
SUSD1-201ENST00000355396 CHIC1Q5VXU3 224 aa19.68■□□□□ 0.74
SUSD1-201ENST00000355396 TRIM41Q8WV44 630 aa19.63■□□□□ 0.73
SUSD1-201ENST00000355396 ZNF608Q9ULD9 1512 aaPredicted RBP19.62■□□□□ 0.73
SUSD1-201ENST00000355396 ABCA5Q8WWZ7 1642 aa19.61■□□□□ 0.73
SUSD1-201ENST00000355396 EIF4G3O43432 1585 aaKnown RBP19.6■□□□□ 0.73
SUSD1-201ENST00000355396 TDRD9Q8NDG6 1382 aaKnown RBP19.54■□□□□ 0.72
SUSD1-201ENST00000355396 AQRO60306 1485 aaKnown RBP eCLIP19.54■□□□□ 0.721e-7■■■□□ 15.2
SUSD1-201ENST00000355396 GAPVD1Q14C86 1478 aa19.53■□□□□ 0.72
SUSD1-201ENST00000355396 KIF27Q86VH2 1401 aa19.51■□□□□ 0.71
SUSD1-201ENST00000355396 PBRM1Q86U86 1689 aa19.5■□□□□ 0.71
SUSD1-201ENST00000355396 GRIN2BQ13224 1484 aa19.49■□□□□ 0.71
SUSD1-201ENST00000355396 ERICH3Q5RHP9 1530 aa19.49■□□□□ 0.71
SUSD1-201ENST00000355396 MAGI1Q96QZ7 1491 aaPredicted RBP19.43■□□□□ 0.7
SUSD1-201ENST00000355396 EEA1Q15075 1411 aa19.43■□□□□ 0.7
SUSD1-201ENST00000355396 RUSC2Q8N2Y8 1516 aa19.42■□□□□ 0.7
SUSD1-201ENST00000355396 IGF1RP08069 1367 aa19.41■□□□□ 0.7
SUSD1-201ENST00000355396 SNAPC4Q5SXM2 1469 aa19.39■□□□□ 0.69
SUSD1-201ENST00000355396 CUL7Q14999 1698 aa19.38■□□□□ 0.69
SUSD1-201ENST00000355396 ADAMTS12P58397 1594 aa19.38■□□□□ 0.69
SUSD1-201ENST00000355396 FHAD1B1AJZ9 1412 aa19.34■□□□□ 0.69
SUSD1-201ENST00000355396 SYNJ2O15056 1496 aa19.33■□□□□ 0.69
SUSD1-201ENST00000355396 PRXQ9BXM0 1461 aa19.28■□□□□ 0.68
SUSD1-201ENST00000355396 CHD1O14646 1710 aa19.27■□□□□ 0.68
SUSD1-201ENST00000355396 CARMIL1Q5VZK9 1371 aa19.27■□□□□ 0.67
SUSD1-201ENST00000355396 CSRNP3Q8WYN3 585 aa19.26■□□□□ 0.67
SUSD1-201ENST00000355396 GRIN2AQ12879 1464 aa19.24■□□□□ 0.67
SUSD1-201ENST00000355396 RAPGEF2Q9Y4G8 1499 aa19.22■□□□□ 0.67
SUSD1-201ENST00000355396 KIF21BO75037 1637 aa19.21■□□□□ 0.67
SUSD1-201ENST00000355396 CHMP7Q8WUX9 453 aaPredicted RBP19.19■□□□□ 0.66
SUSD1-201ENST00000355396 NUP160Q12769 1436 aa19.19■□□□□ 0.66
SUSD1-201ENST00000355396 CEP170Q5SW79 1584 aa19.14■□□□□ 0.65
SUSD1-201ENST00000355396 CLASP1Q7Z460 1538 aa19.13■□□□□ 0.65
SUSD1-201ENST00000355396 FAM9AQ8IZU1 332 aaPredicted RBP19.12■□□□□ 0.65
SUSD1-201ENST00000355396 OSCARQ8IYS5 282 aa19.11■□□□□ 0.65
SUSD1-201ENST00000355396 FBLN2P98095 1184 aa19.11■□□□□ 0.65
SUSD1-201ENST00000355396 DNAJC5Q9H3Z4 198 aa19.1■□□□□ 0.65
SUSD1-201ENST00000355396 KIAA0586Q9BVV6 1533 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms