Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV9-1A0A075B6T8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV9-1A0A075B6T8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV9-1A0A075B6T8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
TRAV9-1A0A075B6T8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV9-1A0A075B6T8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC16.52■□□□□ 0.24
TRAV9-1A0A075B6T8 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
TRAV9-1A0A075B6T8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV9-1A0A075B6T8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAV9-1A0A075B6T8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAV9-1A0A075B6T8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV9-1A0A075B6T8 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV9-1A0A075B6T8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAV9-1A0A075B6T8 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV9-1A0A075B6T8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV9-1A0A075B6T8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV9-1A0A075B6T8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.52■□□□□ 0.23
TRAV9-1A0A075B6T8 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
TRAV9-1A0A075B6T8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV9-1A0A075B6T8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV9-1A0A075B6T8 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV9-1A0A075B6T8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRAV9-1A0A075B6T8 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV9-1A0A075B6T8 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
TRAV9-1A0A075B6T8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV9-1A0A075B6T8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
TRAV9-1A0A075B6T8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV9-1A0A075B6T8 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV9-1A0A075B6T8 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV9-1A0A075B6T8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV9-1A0A075B6T8 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRAV9-1A0A075B6T8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV9-1A0A075B6T8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
TRAV9-1A0A075B6T8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV9-1A0A075B6T8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV9-1A0A075B6T8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRAV9-1A0A075B6T8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV9-1A0A075B6T8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV9-1A0A075B6T8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV9-1A0A075B6T8 AC090877.2-201ENST00000558441 1738 ntBASIC16.5■□□□□ 0.23
TRAV9-1A0A075B6T8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TRAV9-1A0A075B6T8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV9-1A0A075B6T8 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV9-1A0A075B6T8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV9-1A0A075B6T8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV9-1A0A075B6T8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV9-1A0A075B6T8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV9-1A0A075B6T8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV9-1A0A075B6T8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV9-1A0A075B6T8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV9-1A0A075B6T8 AC025884.2-201ENST00000553429 711 ntBASIC16.5■□□□□ 0.23
TRAV9-1A0A075B6T8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV9-1A0A075B6T8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV9-1A0A075B6T8 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV9-1A0A075B6T8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV9-1A0A075B6T8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV9-1A0A075B6T8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TRAV9-1A0A075B6T8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
TRAV9-1A0A075B6T8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV9-1A0A075B6T8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRAV9-1A0A075B6T8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV9-1A0A075B6T8 AC021231.2-201ENST00000594613 730 ntBASIC16.49■□□□□ 0.23
TRAV9-1A0A075B6T8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV9-1A0A075B6T8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
TRAV9-1A0A075B6T8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.49■□□□□ 0.23
TRAV9-1A0A075B6T8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAV9-1A0A075B6T8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV9-1A0A075B6T8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRAV9-1A0A075B6T8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV9-1A0A075B6T8 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRAV9-1A0A075B6T8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV9-1A0A075B6T8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV9-1A0A075B6T8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV9-1A0A075B6T8 Z98882.1-201ENST00000622160 2253 ntBASIC16.48■□□□□ 0.23
TRAV9-1A0A075B6T8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV9-1A0A075B6T8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV9-1A0A075B6T8 FEM1AP4-201ENST00000443167 1987 ntBASIC16.48■□□□□ 0.23
TRAV9-1A0A075B6T8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV9-1A0A075B6T8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV9-1A0A075B6T8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV9-1A0A075B6T8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV9-1A0A075B6T8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV9-1A0A075B6T8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV9-1A0A075B6T8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV9-1A0A075B6T8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV9-1A0A075B6T8 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRAV9-1A0A075B6T8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
TRAV9-1A0A075B6T8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV9-1A0A075B6T8 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV9-1A0A075B6T8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV9-1A0A075B6T8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV9-1A0A075B6T8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV9-1A0A075B6T8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV9-1A0A075B6T8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV9-1A0A075B6T8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV9-1A0A075B6T8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV9-1A0A075B6T8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRAV9-1A0A075B6T8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRAV9-1A0A075B6T8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAV9-1A0A075B6T8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms