Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 AC011477.7-201ENST00000617163 1440 ntBASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 IP6K1-201ENST00000321599 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.01□□□□□ -0.49
NPIPA3F8WFD2 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPA3F8WFD2 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPA3F8WFD2 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC12□□□□□ -0.49
NPIPA3F8WFD2 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPA3F8WFD2 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC12□□□□□ -0.49
NPIPA3F8WFD2 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12□□□□□ -0.49
NPIPA3F8WFD2 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPA3F8WFD2 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 SLC36A4-201ENST00000326402 6012 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPA3F8WFD2 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPA3F8WFD2 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPA3F8WFD2 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPA3F8WFD2 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 AL157823.1-201ENST00000403727 628 ntBASIC12□□□□□ -0.49
NPIPA3F8WFD2 SSR4P1-201ENST00000415143 412 ntBASIC12□□□□□ -0.49
NPIPA3F8WFD2 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC12□□□□□ -0.49
NPIPA3F8WFD2 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 AC133555.4-201ENST00000569081 152 ntBASIC12□□□□□ -0.49
NPIPA3F8WFD2 FBXO36P1-201ENST00000579006 471 ntBASIC12□□□□□ -0.49
NPIPA3F8WFD2 AC016582.2-202ENST00000587765 1094 ntBASIC12□□□□□ -0.49
NPIPA3F8WFD2 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPA3F8WFD2 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPA3F8WFD2 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12□□□□□ -0.49
NPIPA3F8WFD2 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPA3F8WFD2 AC034205.3-201ENST00000603595 1376 ntBASIC12□□□□□ -0.49
NPIPA3F8WFD2 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPA3F8WFD2 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPA3F8WFD2 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPA3F8WFD2 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC12□□□□□ -0.49
NPIPA3F8WFD2 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPA3F8WFD2 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPA3F8WFD2 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPA3F8WFD2 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPA3F8WFD2 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC12□□□□□ -0.49
NPIPA3F8WFD2 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC12□□□□□ -0.49
NPIPA3F8WFD2 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPA3F8WFD2 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 SNORA57-201ENST00000383870 149 ntBASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 AL357373.1-201ENST00000394974 322 ntBASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPA3F8WFD2 AC004522.1-201ENST00000419978 654 ntBASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms