Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 DTX3L-202ENST00000383661 687 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 AC073869.2-201ENST00000417338 1026 ntBASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 OLR1-203ENST00000432556 950 ntTSL 2 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 PTPA-220ENST00000436883 532 ntTSL 4 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 AC098934.1-203ENST00000442868 1262 ntBASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 COQ6-210ENST00000554920 649 ntTSL 3 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 SPCS2P1-201ENST00000561636 679 ntBASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 MIR4745-201ENST00000577608 62 ntBASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 PFAS-212ENST00000625942 396 ntTSL 5 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 PRRX1-207ENST00000497230 3501 ntTSL 2 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 KRBA1-201ENST00000319551 4020 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 FUT8-204ENST00000394586 3559 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 AC237221.1-202ENST00000563054 2947 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 RNF4-222ENST00000541204 2796 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 SPATA13-205ENST00000409126 2111 ntTSL 2 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 KRT8P21-201ENST00000430398 1491 ntBASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 PAK5-203ENST00000378429 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 SPRTN-202ENST00000295050 3468 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 DENND2A-210ENST00000537639 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 CLK3-201ENST00000345005 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 GAL3ST4-203ENST00000413800 2334 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 DDR1-224ENST00000376567 3832 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 ST5-230ENST00000530438 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 TM9SF4-201ENST00000217315 4032 ntTSL 2 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 ENC1-206ENST00000537006 2024 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 LINC00452-202ENST00000609661 2896 ntTSL 5 BASIC10.79□□□□□ -0.68
RCL1Q9Y2P8 SEC24A-201ENST00000322887 2700 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 TRIM46-201ENST00000334634 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 TSPAN6-201ENST00000373020 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 MADD-207ENST00000402799 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 FAM131A-211ENST00000639617 4450 ntTSL 5 BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 PTGFR-202ENST00000370757 4379 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 CCDC88A-207ENST00000436346 9811 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 MAP10-201ENST00000418460 3516 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 DPH2-201ENST00000255108 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 MBP-207ENST00000397865 2127 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 TJP2-201ENST00000348208 4058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 BIRC2-213ENST00000613397 4066 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 FAM46A-202ENST00000369754 5664 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 ENO1-201ENST00000234590 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 KCNAB2-201ENST00000164247 4273 ntAPPRIS P4 TSL 2 BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 HKR1-204ENST00000544914 2854 ntTSL 2 BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 CCDC129-201ENST00000319386 4544 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 STIM1-209ENST00000527651 2184 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 NCR3-202ENST00000376071 541 ntTSL 5 BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 SMS-201ENST00000379404 1174 ntTSL 3 BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 HNRNPA1P63-201ENST00000427917 963 ntBASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 HMGN1P19-201ENST00000436976 333 ntBASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 AC104073.2-201ENST00000453737 312 ntBASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 RN7SL788P-201ENST00000460504 316 ntBASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 KRT17P8-201ENST00000540749 863 ntBASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 EID1-202ENST00000560490 584 ntTSL 3 BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 COX11-202ENST00000571584 1108 ntTSL 2 BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 RN7SL163P-201ENST00000583100 276 ntBASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 HPX-213ENST00000615166 826 ntTSL 5 BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 AC025048.6-201ENST00000634326 1161 ntBASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 SIGLEC10-209ENST00000525998 1841 ntTSL 2 BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 TAF1C-201ENST00000341690 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 RBMX-201ENST00000320676 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 LRRC37A7P-201ENST00000583900 2759 ntBASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RCL1Q9Y2P8 PLEKHG4-202ENST00000379344 4513 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms