RNA–Protein interactions for RNA: ENST00000497230.2

PRRX1-207, Transcript of paired related homeobox 1, humanhuman

TSL 2 BASIC

Gene PRRX1, Length 3,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRX1-207ENST00000497230 NISCHQ9Y2I1 1504 aa23.01■■□□□ 1.27
PRRX1-207ENST00000497230 SUPT5HO00267 1087 aaKnown RBP20.23■□□□□ 0.83
PRRX1-207ENST00000497230 SHROOM4Q9ULL8 1493 aa20.07■□□□□ 0.8
PRRX1-207ENST00000497230 CCDC180Q9P1Z9 1646 aa20.06■□□□□ 0.8
PRRX1-207ENST00000497230 PCGF6Q9BYE7 350 aa20.01■□□□□ 0.79
PRRX1-207ENST00000497230 PPARGC1BQ86YN6 1023 aaKnown RBP19.9■□□□□ 0.78
PRRX1-207ENST00000497230 HRCP23327 699 aa19.81■□□□□ 0.76
PRRX1-207ENST00000497230 DCAF8L2P0C7V8 631 aa19.56■□□□□ 0.72
PRRX1-207ENST00000497230 ZCCHC6Q5VYS8 1495 aaKnown RBP19.53■□□□□ 0.72
PRRX1-207ENST00000497230 EHMT2Q96KQ7 1210 aa19.35■□□□□ 0.69
PRRX1-207ENST00000497230 DCAF1Q9Y4B6 1507 aa19.27■□□□□ 0.67
PRRX1-207ENST00000497230 PELP1Q8IZL8 1130 aaKnown RBP19.24■□□□□ 0.67
PRRX1-207ENST00000497230 LOC105371045A0A1W2PR82 267 aa19.17■□□□□ 0.66
PRRX1-207ENST00000497230 CHIC1Q5VXU3 224 aa19.11■□□□□ 0.65
PRRX1-207ENST00000497230 FAM9AQ8IZU1 332 aaPredicted RBP18.95■□□□□ 0.62
PRRX1-207ENST00000497230 MYO15BQ96JP2 1530 aa18.89■□□□□ 0.61
PRRX1-207ENST00000497230 SCAF1Q9H7N4 1312 aaKnown RBP18.88■□□□□ 0.61
PRRX1-207ENST00000497230 TRIM26Q12899 539 aaPredicted RBP18.84■□□□□ 0.61
PRRX1-207ENST00000497230 TTBK1Q5TCY1 1321 aaPredicted RBP18.79■□□□□ 0.6
PRRX1-207ENST00000497230 ZEB1P37275 1124 aaPredicted RBP18.69■□□□□ 0.58
PRRX1-207ENST00000497230 YTHDC1Q96MU7 727 aaKnown RBP18.68■□□□□ 0.58
PRRX1-207ENST00000497230 GTF3C3Q9Y5Q9 886 aa18.6■□□□□ 0.57
PRRX1-207ENST00000497230 CCER1Q8TC90 406 aaPredicted RBP18.58■□□□□ 0.57
PRRX1-207ENST00000497230 CENPBP07199 599 aaPredicted RBP18.57■□□□□ 0.56
PRRX1-207ENST00000497230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.5■□□□□ 0.55
PRRX1-207ENST00000497230 NEUROD1Q13562 356 aa18.49■□□□□ 0.55
PRRX1-207ENST00000497230 MYT1Q01538 1121 aa18.45■□□□□ 0.54
PRRX1-207ENST00000497230 ACIN1Q9UKV3 1341 aaKnown RBP18.44■□□□□ 0.54
PRRX1-207ENST00000497230 ABCC9O60706 1549 aa18.4■□□□□ 0.54
PRRX1-207ENST00000497230 TRIM41Q8WV44 630 aa18.39■□□□□ 0.53
PRRX1-207ENST00000497230 NACADO15069 1562 aa18.38■□□□□ 0.53
PRRX1-207ENST00000497230 DIEXFQ68CQ4 756 aaKnown RBP18.33■□□□□ 0.53
PRRX1-207ENST00000497230 SCRIBQ14160 1630 aa18.14■□□□□ 0.49
PRRX1-207ENST00000497230 UNC13AQ9UPW8 1703 aa18.01■□□□□ 0.47
PRRX1-207ENST00000497230 RB1CC1Q8TDY2 1594 aa18■□□□□ 0.47
PRRX1-207ENST00000497230 RSF1Q96T23 1441 aaPredicted RBP17.96■□□□□ 0.47
PRRX1-207ENST00000497230 RANGAP1P46060 587 aaPredicted RBP17.91■□□□□ 0.46
PRRX1-207ENST00000497230 HNRNPUL2Q1KMD3 747 aaKnown RBP17.86■□□□□ 0.45
PRRX1-207ENST00000497230 BCANQ96GW7 911 aa17.81■□□□□ 0.44
PRRX1-207ENST00000497230 ZNF316A6NFI3 1004 aaPredicted RBP17.78■□□□□ 0.44
PRRX1-207ENST00000497230 MIER1Q8N108 512 aa17.78■□□□□ 0.44
PRRX1-207ENST00000497230 EIF4G1Q04637 1599 aaKnown RBP17.77■□□□□ 0.43
PRRX1-207ENST00000497230 MROH2BQ7Z745 1585 aa17.76■□□□□ 0.43
PRRX1-207ENST00000497230 BAZ1AQ9NRL2 1556 aaPredicted RBP17.74■□□□□ 0.43
PRRX1-207ENST00000497230 UBTFP17480 764 aaKnown RBP17.74■□□□□ 0.43
PRRX1-207ENST00000497230 CECR2Q9BXF3 1484 aa17.73■□□□□ 0.43
PRRX1-207ENST00000497230 BICRAQ9NZM4 1560 aa17.7■□□□□ 0.42
PRRX1-207ENST00000497230 WIZO95785 1651 aa17.66■□□□□ 0.42
PRRX1-207ENST00000497230 SMARCA4P51532 1647 aa17.63■□□□□ 0.41
PRRX1-207ENST00000497230 PEG3Q9GZU2 1588 aa17.61■□□□□ 0.41
PRRX1-207ENST00000497230 APLP2Q06481 763 aa17.59■□□□□ 0.41
PRRX1-207ENST00000497230 BCL11AQ9H165 835 aa17.55■□□□□ 0.4
PRRX1-207ENST00000497230 TOP2AP11388 1531 aaKnown RBP17.53■□□□□ 0.4
PRRX1-207ENST00000497230 ERICH6Q7L0X2 663 aa17.53■□□□□ 0.4
PRRX1-207ENST00000497230 ITGAEP38570 1179 aa17.43■□□□□ 0.38
PRRX1-207ENST00000497230 ANP32EQ9BTT0 268 aa17.43■□□□□ 0.38
PRRX1-207ENST00000497230 NEFLP07196 543 aa17.42■□□□□ 0.38
PRRX1-207ENST00000497230 SMARCA2P51531 1590 aa17.41■□□□□ 0.38
PRRX1-207ENST00000497230 SUPT16HQ9Y5B9 1047 aaKnown RBP17.39■□□□□ 0.37
PRRX1-207ENST00000497230 CSRNP3Q8WYN3 585 aa17.38■□□□□ 0.37
PRRX1-207ENST00000497230 FKBP8Q14318 412 aa17.34■□□□□ 0.37
PRRX1-207ENST00000497230 TSHZ2Q9NRE2 1034 aa17.3■□□□□ 0.36
PRRX1-207ENST00000497230 CCDC88BA6NC98 1476 aa17.25■□□□□ 0.35
PRRX1-207ENST00000497230 TRIM52Q96A61 297 aa17.17■□□□□ 0.34
PRRX1-207ENST00000497230 KCNH8Q96L42 1107 aa17.12■□□□□ 0.33
PRRX1-207ENST00000497230 IRX6P78412 446 aaPredicted RBP17.12■□□□□ 0.33
PRRX1-207ENST00000497230 ATAD2BQ9ULI0 1458 aa17.11■□□□□ 0.33
PRRX1-207ENST00000497230 HIRIP3Q9BW71 556 aaPredicted RBP17.11■□□□□ 0.33
PRRX1-207ENST00000497230 CNGB1Q14028 1251 aaPredicted RBP17.1■□□□□ 0.33
PRRX1-207ENST00000497230 DDX10Q13206 875 aaKnown RBP17.09■□□□□ 0.33
PRRX1-207ENST00000497230 ATP1B4Q9UN42 357 aaPredicted RBP17.05■□□□□ 0.32
PRRX1-207ENST00000497230 HMGXB3Q12766 1538 aa17.05■□□□□ 0.32
PRRX1-207ENST00000497230 RBM19Q9Y4C8 960 aaKnown RBP17.03■□□□□ 0.32
PRRX1-207ENST00000497230 NBR1Q14596 966 aa16.99■□□□□ 0.31
PRRX1-207ENST00000497230 ABCC8Q09428 1581 aa16.98■□□□□ 0.31
PRRX1-207ENST00000497230 CEP162Q5TB80 1403 aa16.97■□□□□ 0.31
PRRX1-207ENST00000497230 CDK11AQ9UQ88 783 aaPredicted RBP16.95■□□□□ 0.3
PRRX1-207ENST00000497230 NCAPD3P42695 1498 aa16.94■□□□□ 0.3
PRRX1-207ENST00000497230 PRDM2Q13029 1718 aa16.93■□□□□ 0.3
PRRX1-207ENST00000497230 CLSPNQ9HAW4 1339 aa16.93■□□□□ 0.3
PRRX1-207ENST00000497230 BIVM-ERCC5R4GMW8 1640 aa16.91■□□□□ 0.3
PRRX1-207ENST00000497230 BAZ1BQ9UIG0 1483 aaKnown RBP16.89■□□□□ 0.29
PRRX1-207ENST00000497230 SYNJ1O43426 1573 aa16.88■□□□□ 0.29
PRRX1-207ENST00000497230 EEA1Q15075 1411 aa16.85■□□□□ 0.29
PRRX1-207ENST00000497230 ANP32CO43423 234 aa16.85■□□□□ 0.29
PRRX1-207ENST00000497230 PABPN1Q86U42 306 aaKnown RBP eCLIP16.84■□□□□ 0.29
PRRX1-207ENST00000497230 TOP2BQ02880 1626 aa16.83■□□□□ 0.28
PRRX1-207ENST00000497230 RTN4Q9NQC3 1192 aaKnown RBP16.82■□□□□ 0.28
PRRX1-207ENST00000497230 HNRNPUQ00839 825 aaKnown RBP eCLIP16.81■□□□□ 0.28
PRRX1-207ENST00000497230 KIF21BO75037 1637 aa16.81■□□□□ 0.28
PRRX1-207ENST00000497230 SENP3-EIF4A1A0A087X0R7 540 aa16.8■□□□□ 0.28
PRRX1-207ENST00000497230 FAM50AQ14320 339 aaKnown RBP16.78■□□□□ 0.28
PRRX1-207ENST00000497230 SOGA1O94964 1423 aa16.78■□□□□ 0.28
PRRX1-207ENST00000497230 RTL5Q5HYW3 569 aaPredicted RBP16.78■□□□□ 0.28
PRRX1-207ENST00000497230 WRNQ14191 1432 aaPredicted RBP eCLIP16.78■□□□□ 0.28
PRRX1-207ENST00000497230 POLR3GLQ9BT43 218 aa16.75■□□□□ 0.27
PRRX1-207ENST00000497230 DEKP35659 375 aaKnown RBP16.74■□□□□ 0.27
PRRX1-207ENST00000497230 SIN3AQ96ST3 1273 aa16.71■□□□□ 0.27
PRRX1-207ENST00000497230 CFTRP13569 1480 aa16.69■□□□□ 0.26
PRRX1-207ENST00000497230 NPM2Q86SE8 214 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms