RNA–Protein interactions for RNA: ENST00000369754.7

FAM46A-202, Transcript of Putative nucleotidyltransferase FAM46A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM46A, Length 5,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM46A-202ENST00000369754 DCAF8L2P0C7V8 631 aa23.36■■□□□ 1.33
FAM46A-202ENST00000369754 NISCHQ9Y2I1 1504 aa22.47■■□□□ 1.19
FAM46A-202ENST00000369754 SHROOM4Q9ULL8 1493 aa21.3■■□□□ 1
FAM46A-202ENST00000369754 SUPT5HO00267 1087 aaKnown RBP21.24■□□□□ 0.99
FAM46A-202ENST00000369754 EHMT2Q96KQ7 1210 aa20.68■□□□□ 0.9
FAM46A-202ENST00000369754 FAM9AQ8IZU1 332 aaPredicted RBP20.33■□□□□ 0.84
FAM46A-202ENST00000369754 ABCC9O60706 1549 aa20.19■□□□□ 0.82
FAM46A-202ENST00000369754 RANGAP1P46060 587 aaPredicted RBP20.06■□□□□ 0.8
FAM46A-202ENST00000369754 APLP2Q06481 763 aa20.05■□□□□ 0.8
FAM46A-202ENST00000369754 PABPN1Q86U42 306 aaKnown RBP eCLIP19.93■□□□□ 0.78
FAM46A-202ENST00000369754 ATP1B4Q9UN42 357 aaPredicted RBP19.91■□□□□ 0.78
FAM46A-202ENST00000369754 TTBK1Q5TCY1 1321 aaPredicted RBP19.78■□□□□ 0.76
FAM46A-202ENST00000369754 TRIM41Q8WV44 630 aa19.7■□□□□ 0.74
FAM46A-202ENST00000369754 UBTFP17480 764 aaKnown RBP19.56■□□□□ 0.72
FAM46A-202ENST00000369754 MYT1LQ9UL68 1186 aa19.45■□□□□ 0.7
FAM46A-202ENST00000369754 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.43■□□□□ 0.7
FAM46A-202ENST00000369754 HNRNPUL2Q1KMD3 747 aaKnown RBP19.43■□□□□ 0.7
FAM46A-202ENST00000369754 FBLN2P98095 1184 aa19.2■□□□□ 0.66
FAM46A-202ENST00000369754 CHIC1Q5VXU3 224 aa19.07■□□□□ 0.64
FAM46A-202ENST00000369754 PCGF6Q9BYE7 350 aa18.95■□□□□ 0.62
FAM46A-202ENST00000369754 PPARGC1BQ86YN6 1023 aaKnown RBP18.91■□□□□ 0.62
FAM46A-202ENST00000369754 SCRIBQ14160 1630 aa18.89■□□□□ 0.61
FAM46A-202ENST00000369754 ITGAEP38570 1179 aa18.86■□□□□ 0.61
FAM46A-202ENST00000369754 CCDC180Q9P1Z9 1646 aa18.86■□□□□ 0.61
FAM46A-202ENST00000369754 CCER1Q8TC90 406 aaPredicted RBP18.71■□□□□ 0.59
FAM46A-202ENST00000369754 RB1CC1Q8TDY2 1594 aa18.68■□□□□ 0.58
FAM46A-202ENST00000369754 ARID3CA6NKF2 412 aa18.62■□□□□ 0.57
FAM46A-202ENST00000369754 ZCCHC6Q5VYS8 1495 aaKnown RBP18.55■□□□□ 0.56
FAM46A-202ENST00000369754 LOC105371045A0A1W2PR82 267 aa18.52■□□□□ 0.55
FAM46A-202ENST00000369754 POLR3GLQ9BT43 218 aa18.52■□□□□ 0.55
FAM46A-202ENST00000369754 P3H3Q8IVL6 736 aa18.5■□□□□ 0.55
FAM46A-202ENST00000369754 NPM1P06748 294 aaKnown RBP eCLIP18.5■□□□□ 0.55
FAM46A-202ENST00000369754 PLPPR3Q6T4P5 718 aa18.48■□□□□ 0.55
FAM46A-202ENST00000369754 FAM50AQ14320 339 aaKnown RBP18.47■□□□□ 0.55
FAM46A-202ENST00000369754 SLC4A1APQ9BWU0 796 aaKnown RBP18.46■□□□□ 0.55
FAM46A-202ENST00000369754 PELP1Q8IZL8 1130 aaKnown RBP18.42■□□□□ 0.54
FAM46A-202ENST00000369754 BCANQ96GW7 911 aa18.38■□□□□ 0.53
FAM46A-202ENST00000369754 TRIM52Q96A61 297 aa18.35■□□□□ 0.53
FAM46A-202ENST00000369754 ESF1Q9H501 851 aaKnown RBP18.35■□□□□ 0.53
FAM46A-202ENST00000369754 ERCC6Q03468 1493 aa18.34■□□□□ 0.53
FAM46A-202ENST00000369754 CHMP7Q8WUX9 453 aaPredicted RBP18.34■□□□□ 0.53
FAM46A-202ENST00000369754 NACADO15069 1562 aa18.32■□□□□ 0.52
FAM46A-202ENST00000369754 ZNF777Q9ULD5 760 aaPredicted RBP18.31■□□□□ 0.52
FAM46A-202ENST00000369754 CNGB1Q14028 1251 aaPredicted RBP18.29■□□□□ 0.52
FAM46A-202ENST00000369754 ZEB1P37275 1124 aaPredicted RBP18.18■□□□□ 0.5
FAM46A-202ENST00000369754 CDK11AQ9UQ88 783 aaPredicted RBP18.18■□□□□ 0.5
FAM46A-202ENST00000369754 CSRNP3Q8WYN3 585 aa18.12■□□□□ 0.49
FAM46A-202ENST00000369754 BAZ1BQ9UIG0 1483 aaKnown RBP18.11■□□□□ 0.49
FAM46A-202ENST00000369754 ZNF326Q5BKZ1 582 aaKnown RBP18.09■□□□□ 0.49
FAM46A-202ENST00000369754 TRHP20396 242 aaPredicted RBP18.08■□□□□ 0.48
FAM46A-202ENST00000369754 TRIM26Q12899 539 aaPredicted RBP18.08■□□□□ 0.48
FAM46A-202ENST00000369754 STAG3Q9UJ98 1225 aa18.08■□□□□ 0.48
FAM46A-202ENST00000369754 NEUROD1Q13562 356 aa18■□□□□ 0.47
FAM46A-202ENST00000369754 CHGAP10645 457 aaKnown RBP17.99■□□□□ 0.47
FAM46A-202ENST00000369754 KCNH8Q96L42 1107 aa17.99■□□□□ 0.47
FAM46A-202ENST00000369754 YTHDC1Q96MU7 727 aaKnown RBP17.93■□□□□ 0.46
FAM46A-202ENST00000369754 ARID4BQ4LE39 1312 aaPredicted RBP17.91■□□□□ 0.46
FAM46A-202ENST00000369754 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.85■□□□□ 0.45
FAM46A-202ENST00000369754 DCAF1Q9Y4B6 1507 aa17.84■□□□□ 0.45
FAM46A-202ENST00000369754 SLC24A1O60721 1099 aa17.84■□□□□ 0.45
FAM46A-202ENST00000369754 NEFLP07196 543 aa17.79■□□□□ 0.44
FAM46A-202ENST00000369754 CENPBP07199 599 aaPredicted RBP17.78■□□□□ 0.44
FAM46A-202ENST00000369754 CECR2Q9BXF3 1484 aa17.78■□□□□ 0.44
FAM46A-202ENST00000369754 RSF1Q96T23 1441 aaPredicted RBP17.74■□□□□ 0.43
FAM46A-202ENST00000369754 SENP3Q9H4L4 574 aaPredicted RBP17.74■□□□□ 0.43
FAM46A-202ENST00000369754 CHIC2Q9UKJ5 165 aa17.73■□□□□ 0.43
FAM46A-202ENST00000369754 PLEKHD1A6NEE1 506 aa17.72■□□□□ 0.43
FAM46A-202ENST00000369754 TSPY4P0CV99 314 aa17.71■□□□□ 0.43
FAM46A-202ENST00000369754 TSPY10P0CW01 314 aa17.71■□□□□ 0.43
FAM46A-202ENST00000369754 BAZ1AQ9NRL2 1556 aaPredicted RBP17.71■□□□□ 0.43
FAM46A-202ENST00000369754 SCAF1Q9H7N4 1312 aaKnown RBP17.7■□□□□ 0.42
FAM46A-202ENST00000369754 PDS5BQ9NTI5 1447 aa17.67■□□□□ 0.42
FAM46A-202ENST00000369754 MTUS2Q5JR59 1369 aa17.64■□□□□ 0.41
FAM46A-202ENST00000369754 C14orf37Q86TY3 774 aa17.62■□□□□ 0.41
FAM46A-202ENST00000369754 WRNQ14191 1432 aaPredicted RBP eCLIP17.62■□□□□ 0.41
FAM46A-202ENST00000369754 ERICH6Q7L0X2 663 aa17.61■□□□□ 0.41
FAM46A-202ENST00000369754 PPP1R15AO75807 674 aaPredicted RBP17.6■□□□□ 0.41
FAM46A-202ENST00000369754 PLEKHG5O94827 1062 aa17.6■□□□□ 0.41
FAM46A-202ENST00000369754 KIF27Q86VH2 1401 aa17.57■□□□□ 0.4
FAM46A-202ENST00000369754 EIF4G1Q04637 1599 aaKnown RBP17.56■□□□□ 0.4
FAM46A-202ENST00000369754 SMARCA2P51531 1590 aa17.55■□□□□ 0.4
FAM46A-202ENST00000369754 NEFMP07197 916 aa17.55■□□□□ 0.4
FAM46A-202ENST00000369754 MLECQ14165 292 aa17.52■□□□□ 0.4
FAM46A-202ENST00000369754 MYO15BQ96JP2 1530 aa17.52■□□□□ 0.4
FAM46A-202ENST00000369754 A0A0G2JS52 829 aa17.51■□□□□ 0.39
FAM46A-202ENST00000369754 ZBTB7CA1YPR0 619 aa17.46■□□□□ 0.39
FAM46A-202ENST00000369754 CUX2O14529 1486 aa17.45■□□□□ 0.38
FAM46A-202ENST00000369754 CFDP1Q9UEE9 299 aaPredicted RBP17.45■□□□□ 0.38
FAM46A-202ENST00000369754 KDM2AQ9Y2K7 1162 aa17.43■□□□□ 0.38
FAM46A-202ENST00000369754 TDRD9Q8NDG6 1382 aaKnown RBP17.43■□□□□ 0.38
FAM46A-202ENST00000369754 HAP1P54257 671 aaPredicted RBP17.42■□□□□ 0.38
FAM46A-202ENST00000369754 SOGA1O94964 1423 aa17.41■□□□□ 0.38
FAM46A-202ENST00000369754 RRP7BPQ9NSQ0 103 aa17.41■□□□□ 0.38
FAM46A-202ENST00000369754 CLIP1P30622 1438 aa17.4■□□□□ 0.38
FAM46A-202ENST00000369754 HRCP23327 699 aa17.4■□□□□ 0.38
FAM46A-202ENST00000369754 MROH2BQ7Z745 1585 aa17.39■□□□□ 0.37
FAM46A-202ENST00000369754 MYT1Q01538 1121 aa17.39■□□□□ 0.37
FAM46A-202ENST00000369754 CYB5RLQ6IPT4 315 aa17.38■□□□□ 0.37
FAM46A-202ENST00000369754 BCL11AQ9H165 835 aa17.38■□□□□ 0.37
FAM46A-202ENST00000369754 AEBP2Q6ZN18 517 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms