RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 NISCHQ9Y2I1 1504 aa26.22■■□□□ 1.79
SEC24A-201ENST00000322887 CCDC180Q9P1Z9 1646 aa23.15■■□□□ 1.3
SEC24A-201ENST00000322887 ABCC9O60706 1549 aa22.09■■□□□ 1.13
SEC24A-201ENST00000322887 ZCCHC6Q5VYS8 1495 aaKnown RBP21.95■■□□□ 1.1
SEC24A-201ENST00000322887 DCAF1Q9Y4B6 1507 aa21.81■■□□□ 1.08
SEC24A-201ENST00000322887 MYO15BQ96JP2 1530 aa21.77■■□□□ 1.08
SEC24A-201ENST00000322887 NACADO15069 1562 aa21.67■■□□□ 1.06
SEC24A-201ENST00000322887 RB1CC1Q8TDY2 1594 aa21.55■■□□□ 1.04
SEC24A-201ENST00000322887 DCAF8L2P0C7V8 631 aa21.53■■□□□ 1.04
SEC24A-201ENST00000322887 SHROOM4Q9ULL8 1493 aa21.2■□□□□ 0.98
SEC24A-201ENST00000322887 SCRIBQ14160 1630 aa21.03■□□□□ 0.96
SEC24A-201ENST00000322887 UNC13AQ9UPW8 1703 aa20.99■□□□□ 0.95
SEC24A-201ENST00000322887 SUPT5HO00267 1087 aaKnown RBP20.93■□□□□ 0.94
SEC24A-201ENST00000322887 BICRAQ9NZM4 1560 aa20.86■□□□□ 0.93
SEC24A-201ENST00000322887 PABPN1Q86U42 306 aaKnown RBP eCLIP20.68■□□□□ 0.9
SEC24A-201ENST00000322887 PPARGC1BQ86YN6 1023 aaKnown RBP20.43■□□□□ 0.86
SEC24A-201ENST00000322887 HRCP23327 699 aa20.42■□□□□ 0.86
SEC24A-201ENST00000322887 PCGF6Q9BYE7 350 aa20.4■□□□□ 0.86
SEC24A-201ENST00000322887 CECR2Q9BXF3 1484 aa20.31■□□□□ 0.84
SEC24A-201ENST00000322887 BAZ1AQ9NRL2 1556 aaPredicted RBP20.3■□□□□ 0.84
SEC24A-201ENST00000322887 CHIC1Q5VXU3 224 aa20.28■□□□□ 0.84
SEC24A-201ENST00000322887 EIF4G1Q04637 1599 aaKnown RBP20.27■□□□□ 0.84
SEC24A-201ENST00000322887 SMARCA4P51532 1647 aa20.23■□□□□ 0.83
SEC24A-201ENST00000322887 MROH2BQ7Z745 1585 aa20.17■□□□□ 0.82
SEC24A-201ENST00000322887 RSF1Q96T23 1441 aaPredicted RBP20.12■□□□□ 0.81
SEC24A-201ENST00000322887 PEG3Q9GZU2 1588 aa20.11■□□□□ 0.81
SEC24A-201ENST00000322887 CC2D2AQ9P2K1 1620 aa20.05■□□□□ 0.8
SEC24A-201ENST00000322887 SMARCA2P51531 1590 aa20.05■□□□□ 0.8
SEC24A-201ENST00000322887 LOC105371045A0A1W2PR82 267 aa20.04■□□□□ 0.8
SEC24A-201ENST00000322887 ATAD2BQ9ULI0 1458 aa20.02■□□□□ 0.8
SEC24A-201ENST00000322887 NCAPD3P42695 1498 aa19.99■□□□□ 0.79
SEC24A-201ENST00000322887 WIZO95785 1651 aa19.94■□□□□ 0.78
SEC24A-201ENST00000322887 HMGXB3Q12766 1538 aa19.93■□□□□ 0.78
SEC24A-201ENST00000322887 DNAJC5BQ9UF47 199 aa19.87■□□□□ 0.77
SEC24A-201ENST00000322887 BAZ1BQ9UIG0 1483 aaKnown RBP19.86■□□□□ 0.77
SEC24A-201ENST00000322887 TOP2AP11388 1531 aaKnown RBP19.83■□□□□ 0.77
SEC24A-201ENST00000322887 EHMT2Q96KQ7 1210 aa19.62■□□□□ 0.73
SEC24A-201ENST00000322887 CCDC88BA6NC98 1476 aa19.56■□□□□ 0.72
SEC24A-201ENST00000322887 TRIM26Q12899 539 aaPredicted RBP19.51■□□□□ 0.71
SEC24A-201ENST00000322887 FAM9AQ8IZU1 332 aaPredicted RBP19.46■□□□□ 0.71
SEC24A-201ENST00000322887 CADPSQ9ULU8 1353 aa19.4■□□□□ 0.7
SEC24A-201ENST00000322887 CFTRP13569 1480 aa19.4■□□□□ 0.7
SEC24A-201ENST00000322887 LAMC3Q9Y6N6 1575 aa19.37■□□□□ 0.69
SEC24A-201ENST00000322887 SCAF1Q9H7N4 1312 aaKnown RBP19.35■□□□□ 0.69
SEC24A-201ENST00000322887 PRDM2Q13029 1718 aa19.25■□□□□ 0.67
SEC24A-201ENST00000322887 NESP48681 1621 aa19.24■□□□□ 0.67
SEC24A-201ENST00000322887 PDS5BQ9NTI5 1447 aa19.22■□□□□ 0.67
SEC24A-201ENST00000322887 TRIM41Q8WV44 630 aa19.18■□□□□ 0.66
SEC24A-201ENST00000322887 FANCD2Q9BXW9 1451 aa19.14■□□□□ 0.65
SEC24A-201ENST00000322887 CEP164Q9UPV0 1460 aa19.08■□□□□ 0.65
SEC24A-201ENST00000322887 KIF21AQ7Z4S6 1674 aa19.04■□□□□ 0.64
SEC24A-201ENST00000322887 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.04■□□□□ 0.64
SEC24A-201ENST00000322887 TTBK1Q5TCY1 1321 aaPredicted RBP19.04■□□□□ 0.64
SEC24A-201ENST00000322887 ERCC6Q03468 1493 aa19.03■□□□□ 0.64
SEC24A-201ENST00000322887 ZEB1P37275 1124 aaPredicted RBP19.02■□□□□ 0.64
SEC24A-201ENST00000322887 ABCC8Q09428 1581 aa19■□□□□ 0.63
SEC24A-201ENST00000322887 MRC2Q9UBG0 1479 aa18.98■□□□□ 0.63
SEC24A-201ENST00000322887 WRNQ14191 1432 aaPredicted RBP eCLIP18.96■□□□□ 0.63
SEC24A-201ENST00000322887 THOC2Q8NI27 1593 aaKnown RBP18.93■□□□□ 0.62
SEC24A-201ENST00000322887 DNMBPQ6XZF7 1577 aa18.93■□□□□ 0.62
SEC24A-201ENST00000322887 NEUROD1Q13562 356 aa18.93■□□□□ 0.62
SEC24A-201ENST00000322887 WDR62O43379 1518 aa18.93■□□□□ 0.62
SEC24A-201ENST00000322887 URB2Q14146 1524 aaKnown RBP18.92■□□□□ 0.62
SEC24A-201ENST00000322887 CUX1P39880 1505 aa18.9■□□□□ 0.62
SEC24A-201ENST00000322887 TOPBP1Q92547 1522 aa18.89■□□□□ 0.62
SEC24A-201ENST00000322887 TOP2BQ02880 1626 aa18.89■□□□□ 0.61
SEC24A-201ENST00000322887 BIVM-ERCC5R4GMW8 1640 aa18.88■□□□□ 0.61
SEC24A-201ENST00000322887 PELP1Q8IZL8 1130 aaKnown RBP18.87■□□□□ 0.61
SEC24A-201ENST00000322887 SYNJ1O43426 1573 aa18.86■□□□□ 0.61
SEC24A-201ENST00000322887 CCER1Q8TC90 406 aaPredicted RBP18.83■□□□□ 0.61
SEC24A-201ENST00000322887 ACIN1Q9UKV3 1341 aaKnown RBP18.79■□□□□ 0.6
SEC24A-201ENST00000322887 CUX2O14529 1486 aa18.77■□□□□ 0.6
SEC24A-201ENST00000322887 GTF3C3Q9Y5Q9 886 aa18.76■□□□□ 0.59
SEC24A-201ENST00000322887 FGD5Q6ZNL6 1462 aa18.76■□□□□ 0.59
SEC24A-201ENST00000322887 POLA1P09884 1462 aaPredicted RBP18.76■□□□□ 0.59
SEC24A-201ENST00000322887 IFT140Q96RY7 1462 aa18.7■□□□□ 0.58
SEC24A-201ENST00000322887 SOGA1O94964 1423 aa18.68■□□□□ 0.58
SEC24A-201ENST00000322887 DIEXFQ68CQ4 756 aaKnown RBP18.67■□□□□ 0.58
SEC24A-201ENST00000322887 TARBP1Q13395 1621 aaKnown RBP18.66■□□□□ 0.58
SEC24A-201ENST00000322887 ABCA10Q8WWZ4 1543 aa18.66■□□□□ 0.58
SEC24A-201ENST00000322887 WDR97A6NE52 1622 aa18.64■□□□□ 0.57
SEC24A-201ENST00000322887 YTHDC1Q96MU7 727 aaKnown RBP18.63■□□□□ 0.57
SEC24A-201ENST00000322887 RAD54L2Q9Y4B4 1467 aa18.62■□□□□ 0.57
SEC24A-201ENST00000322887 KIF27Q86VH2 1401 aa18.54■□□□□ 0.56
SEC24A-201ENST00000322887 EEA1Q15075 1411 aa18.54■□□□□ 0.56
SEC24A-201ENST00000322887 ABCA5Q8WWZ7 1642 aa18.53■□□□□ 0.56
SEC24A-201ENST00000322887 ZNF608Q9ULD9 1512 aaPredicted RBP18.5■□□□□ 0.55
SEC24A-201ENST00000322887 GAPVD1Q14C86 1478 aa18.48■□□□□ 0.55
SEC24A-201ENST00000322887 TDRD9Q8NDG6 1382 aaKnown RBP18.48■□□□□ 0.55
SEC24A-201ENST00000322887 EIF4G3O43432 1585 aaKnown RBP18.47■□□□□ 0.55
SEC24A-201ENST00000322887 ERICH3Q5RHP9 1530 aa18.45■□□□□ 0.54
SEC24A-201ENST00000322887 AQRO60306 1485 aaKnown RBP eCLIP18.45■□□□□ 0.541e-6■■■■■ 32.5
SEC24A-201ENST00000322887 GRIN2BQ13224 1484 aa18.44■□□□□ 0.54
SEC24A-201ENST00000322887 CENPBP07199 599 aaPredicted RBP18.44■□□□□ 0.54
SEC24A-201ENST00000322887 RUSC2Q8N2Y8 1516 aa18.42■□□□□ 0.54
SEC24A-201ENST00000322887 IGF1RP08069 1367 aa18.41■□□□□ 0.54
SEC24A-201ENST00000322887 PBRM1Q86U86 1689 aa18.38■□□□□ 0.53
SEC24A-201ENST00000322887 MAGI1Q96QZ7 1491 aaPredicted RBP18.37■□□□□ 0.53
SEC24A-201ENST00000322887 CSRNP3Q8WYN3 585 aa18.36■□□□□ 0.53
SEC24A-201ENST00000322887 CUL7Q14999 1698 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms