Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 NPR3-201ENST00000265074 7344 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 FMO6P-201ENST00000236166 1620 ntBASIC13.07□□□□□ -0.32
SATB2Q9UPW6 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 AC145098.2-201ENST00000623593 3026 ntBASIC13.07□□□□□ -0.32
SATB2Q9UPW6 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 RPSAP70-201ENST00000504462 864 ntBASIC13.07□□□□□ -0.32
SATB2Q9UPW6 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 MEP1AP1-201ENST00000636082 1097 ntBASIC13.07□□□□□ -0.32
SATB2Q9UPW6 AL139424.3-202ENST00000641619 917 ntBASIC13.07□□□□□ -0.32
SATB2Q9UPW6 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SATB2Q9UPW6 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 AIG1-203ENST00000367596 559 ntTSL 2 BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 RPL18AP16-201ENST00000424057 531 ntBASIC13.06□□□□□ -0.32
SATB2Q9UPW6 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 URB1-AS1-201ENST00000534991 831 ntBASIC13.06□□□□□ -0.32
SATB2Q9UPW6 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 CSPG4P12-201ENST00000558282 4853 ntBASIC13.06□□□□□ -0.32
SATB2Q9UPW6 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 FAM131B-202ENST00000409346 4295 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 AL358781.1-202ENST00000321081 1360 ntBASIC13.06□□□□□ -0.32
SATB2Q9UPW6 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 AL512791.2-201ENST00000615251 4609 ntBASIC13.06□□□□□ -0.32
SATB2Q9UPW6 OR2I1P-208ENST00000641137 4948 ntBASIC13.06□□□□□ -0.32
SATB2Q9UPW6 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
SATB2Q9UPW6 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SATB2Q9UPW6 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SATB2Q9UPW6 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SATB2Q9UPW6 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SATB2Q9UPW6 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SATB2Q9UPW6 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SATB2Q9UPW6 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.05□□□□□ -0.32
SATB2Q9UPW6 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
SATB2Q9UPW6 AC020917.4-201ENST00000623994 1999 ntBASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms