Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AL009176.1-201ENST00000607876 650 ntBASIC14.2□□□□□ -0.14
SSR1P43307 AC097724.1-201ENST00000609581 426 ntBASIC14.2□□□□□ -0.14
SSR1P43307 COL8A1-201ENST00000261037 5705 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR1P43307 SNAP91-212ENST00000520302 4136 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSR1P43307 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC14.2□□□□□ -0.14
SSR1P43307 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR1P43307 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR1P43307 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC14.2□□□□□ -0.14
SSR1P43307 AL355388.2-201ENST00000610146 2157 ntTSL 4 BASIC14.2□□□□□ -0.14
SSR1P43307 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSR1P43307 AL512791.2-201ENST00000615251 4609 ntBASIC14.2□□□□□ -0.14
SSR1P43307 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC14.2□□□□□ -0.14
SSR1P43307 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SSR1P43307 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR1P43307 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC14.2□□□□□ -0.14
SSR1P43307 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR1P43307 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR1P43307 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC14.2□□□□□ -0.14
SSR1P43307 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR1P43307 FAM160B2-201ENST00000289921 4245 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SSR1P43307 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSR1P43307 TMEM170A-201ENST00000357613 4959 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSR1P43307 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
SSR1P43307 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSR1P43307 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSR1P43307 UBE3B-203ENST00000434735 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSR1P43307 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC14.19□□□□□ -0.14
SSR1P43307 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSR1P43307 UBASH3B-201ENST00000284273 6912 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSR1P43307 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSR1P43307 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSR1P43307 ATP13A2-201ENST00000326735 3840 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSR1P43307 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSR1P43307 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSR1P43307 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSR1P43307 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSR1P43307 LINC02228-202ENST00000641261 2489 ntBASIC14.19□□□□□ -0.14
SSR1P43307 R3HDM2-215ENST00000634871 4092 ntTSL 5 BASIC14.19□□□□□ -0.14
SSR1P43307 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSR1P43307 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC14.19□□□□□ -0.14
SSR1P43307 GREM2-201ENST00000318160 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSR1P43307 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSR1P43307 BDNF-218ENST00000533246 4000 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSR1P43307 PTN-202ENST00000393083 1599 ntTSL 5 BASIC14.19□□□□□ -0.14
SSR1P43307 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSR1P43307 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSR1P43307 CCDC148-201ENST00000283233 3122 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSR1P43307 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSR1P43307 AP000356.3-201ENST00000382243 753 ntBASIC14.19□□□□□ -0.14
SSR1P43307 SNORD23-201ENST00000408876 110 ntBASIC14.19□□□□□ -0.14
SSR1P43307 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC14.19□□□□□ -0.14
SSR1P43307 AC041040.1-201ENST00000425197 460 ntBASIC14.19□□□□□ -0.14
SSR1P43307 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SSR1P43307 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSR1P43307 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.19□□□□□ -0.14
SSR1P43307 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC14.19□□□□□ -0.14
SSR1P43307 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.19□□□□□ -0.14
SSR1P43307 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC14.19□□□□□ -0.14
SSR1P43307 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.19□□□□□ -0.14
SSR1P43307 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SSR1P43307 NDUFS6P1-201ENST00000485187 316 ntBASIC14.19□□□□□ -0.14
SSR1P43307 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.19□□□□□ -0.14
SSR1P43307 RN7SL720P-201ENST00000488178 304 ntBASIC14.19□□□□□ -0.14
SSR1P43307 RN7SL81P-201ENST00000493781 261 ntBASIC14.19□□□□□ -0.14
SSR1P43307 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC14.19□□□□□ -0.14
SSR1P43307 MRPL22P1-201ENST00000505398 616 ntBASIC14.19□□□□□ -0.14
SSR1P43307 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
SSR1P43307 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.19□□□□□ -0.14
SSR1P43307 AC084346.2-201ENST00000607097 949 ntBASIC14.19□□□□□ -0.14
SSR1P43307 MIR8071-1-201ENST00000616769 65 ntBASIC14.19□□□□□ -0.14
SSR1P43307 MIR8071-2-201ENST00000616772 65 ntBASIC14.19□□□□□ -0.14
SSR1P43307 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSR1P43307 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC14.19□□□□□ -0.14
SSR1P43307 AL031587.5-201ENST00000624344 1849 ntBASIC14.19□□□□□ -0.14
SSR1P43307 CCDC88A-207ENST00000436346 9811 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SSR1P43307 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC14.19□□□□□ -0.14
SSR1P43307 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSR1P43307 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSR1P43307 KRT8P42-201ENST00000405771 1399 ntBASIC14.19□□□□□ -0.14
SSR1P43307 LINC01624-203ENST00000607074 3265 ntTSL 2 BASIC14.19□□□□□ -0.14
SSR1P43307 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSR1P43307 AC008764.8-201ENST00000623966 2717 ntBASIC14.19□□□□□ -0.14
SSR1P43307 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC14.19□□□□□ -0.14
SSR1P43307 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
SSR1P43307 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSR1P43307 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSR1P43307 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSR1P43307 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC14.18□□□□□ -0.14
SSR1P43307 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSR1P43307 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SSR1P43307 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC14.18□□□□□ -0.14
SSR1P43307 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSR1P43307 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SSR1P43307 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SSR1P43307 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SSR1P43307 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSR1P43307 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSR1P43307 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC14.18□□□□□ -0.14
SSR1P43307 ACO2-202ENST00000396512 2811 ntTSL 5 BASIC14.18□□□□□ -0.14
SSR1P43307 DNAJB5-204ENST00000454002 2818 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms