RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 DCAF8L2P0C7V8 631 aa21.14■□□□□ 0.97
COL8A1-201ENST00000261037 NISCHQ9Y2I1 1504 aa20.31■□□□□ 0.84
COL8A1-201ENST00000261037 SUPT5HO00267 1087 aaKnown RBP20■□□□□ 0.79
COL8A1-201ENST00000261037 EHMT2Q96KQ7 1210 aa19.75■□□□□ 0.75
COL8A1-201ENST00000261037 SHROOM4Q9ULL8 1493 aa19.67■□□□□ 0.74
COL8A1-201ENST00000261037 TTBK1Q5TCY1 1321 aaPredicted RBP19.06■□□□□ 0.64
COL8A1-201ENST00000261037 PELP1Q8IZL8 1130 aaKnown RBP19.04■□□□□ 0.64
COL8A1-201ENST00000261037 APLP2Q06481 763 aa19.03■□□□□ 0.64
COL8A1-201ENST00000261037 FAM9AQ8IZU1 332 aaPredicted RBP18.98■□□□□ 0.63
COL8A1-201ENST00000261037 RANGAP1P46060 587 aaPredicted RBP18.8■□□□□ 0.6
COL8A1-201ENST00000261037 PCGF6Q9BYE7 350 aa18.7■□□□□ 0.58
COL8A1-201ENST00000261037 ATP1B4Q9UN42 357 aaPredicted RBP18.58■□□□□ 0.56
COL8A1-201ENST00000261037 ERICH6Q7L0X2 663 aa18.47■□□□□ 0.55
COL8A1-201ENST00000261037 CCER1Q8TC90 406 aaPredicted RBP18.42■□□□□ 0.54
COL8A1-201ENST00000261037 TRIM41Q8WV44 630 aa18.39■□□□□ 0.53
COL8A1-201ENST00000261037 CENPBP07199 599 aaPredicted RBP18.34■□□□□ 0.53
COL8A1-201ENST00000261037 UBTFP17480 764 aaKnown RBP18.29■□□□□ 0.52
COL8A1-201ENST00000261037 YTHDC1Q96MU7 727 aaKnown RBP18.26■□□□□ 0.51
COL8A1-201ENST00000261037 PPARGC1BQ86YN6 1023 aaKnown RBP18.21■□□□□ 0.51
COL8A1-201ENST00000261037 ZEB1P37275 1124 aaPredicted RBP18.2■□□□□ 0.5
COL8A1-201ENST00000261037 NEFLP07196 543 aa18.06■□□□□ 0.48
COL8A1-201ENST00000261037 ITGAEP38570 1179 aa17.9■□□□□ 0.46
COL8A1-201ENST00000261037 POLR3GLQ9BT43 218 aa17.89■□□□□ 0.45
COL8A1-201ENST00000261037 MYT1LQ9UL68 1186 aa17.88■□□□□ 0.45
COL8A1-201ENST00000261037 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.83■□□□□ 0.44
COL8A1-201ENST00000261037 HNRNPUL2Q1KMD3 747 aaKnown RBP17.83■□□□□ 0.44
COL8A1-201ENST00000261037 CNGB1Q14028 1251 aaPredicted RBP17.8■□□□□ 0.44
COL8A1-201ENST00000261037 CHIC1Q5VXU3 224 aa17.73■□□□□ 0.43
COL8A1-201ENST00000261037 TRIM26Q12899 539 aaPredicted RBP17.71■□□□□ 0.43
COL8A1-201ENST00000261037 MYT1Q01538 1121 aa17.68■□□□□ 0.42
COL8A1-201ENST00000261037 LOC105371045A0A1W2PR82 267 aa17.64■□□□□ 0.41
COL8A1-201ENST00000261037 DAXXQ9UER7 740 aaPredicted RBP17.64■□□□□ 0.41
COL8A1-201ENST00000261037 HRCP23327 699 aa17.58■□□□□ 0.4
COL8A1-201ENST00000261037 SLC4A1APQ9BWU0 796 aaKnown RBP17.57■□□□□ 0.4
COL8A1-201ENST00000261037 ABCC9O60706 1549 aa17.44■□□□□ 0.38
COL8A1-201ENST00000261037 FAM50AQ14320 339 aaKnown RBP17.34■□□□□ 0.37
COL8A1-201ENST00000261037 CLSPNQ9HAW4 1339 aa17.29■□□□□ 0.36
COL8A1-201ENST00000261037 TRIM52Q96A61 297 aa17.27■□□□□ 0.36
COL8A1-201ENST00000261037 ZNF316A6NFI3 1004 aaPredicted RBP17.26■□□□□ 0.35
COL8A1-201ENST00000261037 NEUROD1Q13562 356 aa17.25■□□□□ 0.35
COL8A1-201ENST00000261037 DIEXFQ68CQ4 756 aaKnown RBP17.23■□□□□ 0.35
COL8A1-201ENST00000261037 PABPN1Q86U42 306 aaKnown RBP eCLIP17.19■□□□□ 0.34
COL8A1-201ENST00000261037 BCANQ96GW7 911 aa17.18■□□□□ 0.34
COL8A1-201ENST00000261037 ZNF326Q5BKZ1 582 aaKnown RBP17.16■□□□□ 0.34
COL8A1-201ENST00000261037 RTL5Q5HYW3 569 aaPredicted RBP17.16■□□□□ 0.34
COL8A1-201ENST00000261037 BCL11AQ9H165 835 aa17.06■□□□□ 0.32
COL8A1-201ENST00000261037 FBLN2P98095 1184 aa17.05■□□□□ 0.32
COL8A1-201ENST00000261037 SLC24A1O60721 1099 aa17.01■□□□□ 0.31
COL8A1-201ENST00000261037 ARID3CA6NKF2 412 aa17■□□□□ 0.31
COL8A1-201ENST00000261037 ANP32CO43423 234 aa16.95■□□□□ 0.3
COL8A1-201ENST00000261037 GTF3C3Q9Y5Q9 886 aa16.93■□□□□ 0.3
COL8A1-201ENST00000261037 P3H3Q8IVL6 736 aa16.92■□□□□ 0.3
COL8A1-201ENST00000261037 CCDC180Q9P1Z9 1646 aa16.91■□□□□ 0.3
COL8A1-201ENST00000261037 ZBTB47Q9UFB7 747 aaPredicted RBP16.91■□□□□ 0.3
COL8A1-201ENST00000261037 CANXP27824 592 aaKnown RBP16.89■□□□□ 0.29
COL8A1-201ENST00000261037 CDK11AQ9UQ88 783 aaPredicted RBP16.85■□□□□ 0.29
COL8A1-201ENST00000261037 ZCCHC6Q5VYS8 1495 aaKnown RBP16.84■□□□□ 0.29
COL8A1-201ENST00000261037 ZNF777Q9ULD5 760 aaPredicted RBP16.8■□□□□ 0.28
COL8A1-201ENST00000261037 SCRIBQ14160 1630 aa16.77■□□□□ 0.28
COL8A1-201ENST00000261037 NEFMP07197 916 aa16.71■□□□□ 0.27
COL8A1-201ENST00000261037 NPM2Q86SE8 214 aaKnown RBP16.71■□□□□ 0.27
COL8A1-201ENST00000261037 PLPPR3Q6T4P5 718 aa16.7■□□□□ 0.26
COL8A1-201ENST00000261037 CHGAP10645 457 aaKnown RBP16.61■□□□□ 0.25
COL8A1-201ENST00000261037 ANP32AP39687 249 aaKnown RBP16.58■□□□□ 0.24
COL8A1-201ENST00000261037 CSRNP3Q8WYN3 585 aa16.56■□□□□ 0.24
COL8A1-201ENST00000261037 ACIN1Q9UKV3 1341 aaKnown RBP16.54■□□□□ 0.24
COL8A1-201ENST00000261037 ESF1Q9H501 851 aaKnown RBP16.53■□□□□ 0.24
COL8A1-201ENST00000261037 SALL2Q9Y467 1007 aaPredicted RBP16.53■□□□□ 0.24
COL8A1-201ENST00000261037 STAG3Q9UJ98 1225 aa16.53■□□□□ 0.24
COL8A1-201ENST00000261037 FKBP8Q14318 412 aa16.51■□□□□ 0.23
COL8A1-201ENST00000261037 RB1CC1Q8TDY2 1594 aa16.5■□□□□ 0.23
COL8A1-201ENST00000261037 FAM9BQ8IZU0 186 aa16.49■□□□□ 0.23
COL8A1-201ENST00000261037 TONSLQ96HA7 1378 aa16.47■□□□□ 0.23
COL8A1-201ENST00000261037 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.45■□□□□ 0.22
COL8A1-201ENST00000261037 CHIC2Q9UKJ5 165 aa16.45■□□□□ 0.22
COL8A1-201ENST00000261037 HNRNPUQ00839 825 aaKnown RBP eCLIP16.44■□□□□ 0.22
COL8A1-201ENST00000261037 HSP90AA1P07900 732 aaKnown RBP16.43■□□□□ 0.22
COL8A1-201ENST00000261037 DDX10Q13206 875 aaKnown RBP16.43■□□□□ 0.22
COL8A1-201ENST00000261037 SENP3Q9H4L4 574 aaPredicted RBP16.4■□□□□ 0.22
COL8A1-201ENST00000261037 NACADO15069 1562 aa16.36■□□□□ 0.21
COL8A1-201ENST00000261037 KDM2AQ9Y2K7 1162 aa16.34■□□□□ 0.21
COL8A1-201ENST00000261037 SCAF1Q9H7N4 1312 aaKnown RBP16.33■□□□□ 0.21
COL8A1-201ENST00000261037 EIF5BO60841 1220 aaKnown RBP16.33■□□□□ 0.2
COL8A1-201ENST00000261037 ANP32BQ92688 251 aaKnown RBP16.33■□□□□ 0.2
COL8A1-201ENST00000261037 ARXQ96QS3 562 aa16.33■□□□□ 0.2
COL8A1-201ENST00000261037 NPM1P06748 294 aaKnown RBP eCLIP16.32■□□□□ 0.2
COL8A1-201ENST00000261037 UPF2Q9HAU5 1272 aaKnown RBP16.31■□□□□ 0.2
COL8A1-201ENST00000261037 PLEKHG5O94827 1062 aa16.31■□□□□ 0.2
COL8A1-201ENST00000261037 NBR1Q14596 966 aa16.29■□□□□ 0.2
COL8A1-201ENST00000261037 HIRIP3Q9BW71 556 aaPredicted RBP16.29■□□□□ 0.2
COL8A1-201ENST00000261037 IRX6P78412 446 aaPredicted RBP16.28■□□□□ 0.2
COL8A1-201ENST00000261037 TMC1Q8TDI8 760 aa16.28■□□□□ 0.2
COL8A1-201ENST00000261037 ZBTB7CA1YPR0 619 aa16.27■□□□□ 0.2
COL8A1-201ENST00000261037 WDR43Q15061 677 aaKnown RBP eCLIP16.27■□□□□ 0.19
COL8A1-201ENST00000261037 A0A0G2JS52 829 aa16.26■□□□□ 0.19
COL8A1-201ENST00000261037 CCDC136Q96JN2 1154 aa16.25■□□□□ 0.19
COL8A1-201ENST00000261037 MRS2Q9HD23 443 aa16.21■□□□□ 0.19
COL8A1-201ENST00000261037 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.19■□□□□ 0.18
COL8A1-201ENST00000261037 SENP3-EIF4A1A0A087X0R7 540 aa16.18■□□□□ 0.18
COL8A1-201ENST00000261037 C14orf37Q86TY3 774 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms