RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 DCAF8L2P0C7V8 631 aa22.71■■□□□ 1.23
UBE3B-203ENST00000434735 NISCHQ9Y2I1 1504 aa20.43■□□□□ 0.86
UBE3B-203ENST00000434735 SUPT5HO00267 1087 aaKnown RBP20.37■□□□□ 0.85
UBE3B-203ENST00000434735 SHROOM4Q9ULL8 1493 aa20.24■□□□□ 0.83
UBE3B-203ENST00000434735 EHMT2Q96KQ7 1210 aa20.14■□□□□ 0.81
UBE3B-203ENST00000434735 FAM9AQ8IZU1 332 aaPredicted RBP19.96■□□□□ 0.79
UBE3B-203ENST00000434735 RANGAP1P46060 587 aaPredicted RBP19.53■□□□□ 0.72
UBE3B-203ENST00000434735 APLP2Q06481 763 aa19.53■□□□□ 0.72
UBE3B-203ENST00000434735 ATP1B4Q9UN42 357 aaPredicted RBP19.46■□□□□ 0.71
UBE3B-203ENST00000434735 TTBK1Q5TCY1 1321 aaPredicted RBP19.29■□□□□ 0.68
UBE3B-203ENST00000434735 MYT1LQ9UL68 1186 aa19.2■□□□□ 0.66
UBE3B-203ENST00000434735 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.99■□□□□ 0.63
UBE3B-203ENST00000434735 HNRNPUL2Q1KMD3 747 aaKnown RBP18.99■□□□□ 0.63
UBE3B-203ENST00000434735 ABCC9O60706 1549 aa18.97■□□□□ 0.63
UBE3B-203ENST00000434735 PABPN1Q86U42 306 aaKnown RBP eCLIP18.96■□□□□ 0.63
UBE3B-203ENST00000434735 CHIC1Q5VXU3 224 aa18.86■□□□□ 0.61
UBE3B-203ENST00000434735 UBTFP17480 764 aaKnown RBP18.85■□□□□ 0.61
UBE3B-203ENST00000434735 TRIM41Q8WV44 630 aa18.8■□□□□ 0.6
UBE3B-203ENST00000434735 PELP1Q8IZL8 1130 aaKnown RBP18.8■□□□□ 0.6
UBE3B-203ENST00000434735 FBLN2P98095 1184 aa18.65■□□□□ 0.58
UBE3B-203ENST00000434735 PCGF6Q9BYE7 350 aa18.32■□□□□ 0.52
UBE3B-203ENST00000434735 ITGAEP38570 1179 aa18.29■□□□□ 0.52
UBE3B-203ENST00000434735 PLPPR3Q6T4P5 718 aa18.27■□□□□ 0.52
UBE3B-203ENST00000434735 SLC4A1APQ9BWU0 796 aaKnown RBP18.21■□□□□ 0.51
UBE3B-203ENST00000434735 PPARGC1BQ86YN6 1023 aaKnown RBP18.17■□□□□ 0.5
UBE3B-203ENST00000434735 POLR3GLQ9BT43 218 aa18.17■□□□□ 0.5
UBE3B-203ENST00000434735 BCANQ96GW7 911 aa18.12■□□□□ 0.49
UBE3B-203ENST00000434735 CCER1Q8TC90 406 aaPredicted RBP18.03■□□□□ 0.48
UBE3B-203ENST00000434735 ARID3CA6NKF2 412 aa18.02■□□□□ 0.48
UBE3B-203ENST00000434735 ESF1Q9H501 851 aaKnown RBP18.02■□□□□ 0.48
UBE3B-203ENST00000434735 NPM1P06748 294 aaKnown RBP eCLIP18.01■□□□□ 0.47
UBE3B-203ENST00000434735 ERICH6Q7L0X2 663 aa18■□□□□ 0.47
UBE3B-203ENST00000434735 CNGB1Q14028 1251 aaPredicted RBP17.98■□□□□ 0.47
UBE3B-203ENST00000434735 FAM50AQ14320 339 aaKnown RBP17.8■□□□□ 0.44
UBE3B-203ENST00000434735 TRIM52Q96A61 297 aa17.77■□□□□ 0.43
UBE3B-203ENST00000434735 P3H3Q8IVL6 736 aa17.76■□□□□ 0.43
UBE3B-203ENST00000434735 TRHP20396 242 aaPredicted RBP17.74■□□□□ 0.43
UBE3B-203ENST00000434735 ZNF777Q9ULD5 760 aaPredicted RBP17.72■□□□□ 0.43
UBE3B-203ENST00000434735 CENPBP07199 599 aaPredicted RBP17.71■□□□□ 0.43
UBE3B-203ENST00000434735 STAG3Q9UJ98 1225 aa17.7■□□□□ 0.42
UBE3B-203ENST00000434735 SLC24A1O60721 1099 aa17.69■□□□□ 0.42
UBE3B-203ENST00000434735 NEFLP07196 543 aa17.64■□□□□ 0.41
UBE3B-203ENST00000434735 ZNF326Q5BKZ1 582 aaKnown RBP17.61■□□□□ 0.41
UBE3B-203ENST00000434735 CHMP7Q8WUX9 453 aaPredicted RBP17.6■□□□□ 0.41
UBE3B-203ENST00000434735 SCRIBQ14160 1630 aa17.57■□□□□ 0.4
UBE3B-203ENST00000434735 CHGAP10645 457 aaKnown RBP17.57■□□□□ 0.4
UBE3B-203ENST00000434735 ZEB1P37275 1124 aaPredicted RBP17.55■□□□□ 0.4
UBE3B-203ENST00000434735 SCAF1Q9H7N4 1312 aaKnown RBP17.52■□□□□ 0.4
UBE3B-203ENST00000434735 ARID4BQ4LE39 1312 aaPredicted RBP17.5■□□□□ 0.39
UBE3B-203ENST00000434735 LOC105371045A0A1W2PR82 267 aa17.48■□□□□ 0.39
UBE3B-203ENST00000434735 CDK11AQ9UQ88 783 aaPredicted RBP17.48■□□□□ 0.39
UBE3B-203ENST00000434735 ERCC6Q03468 1493 aa17.46■□□□□ 0.39
UBE3B-203ENST00000434735 A0A0G2JS52 829 aa17.44■□□□□ 0.38
UBE3B-203ENST00000434735 PLEKHG5O94827 1062 aa17.4■□□□□ 0.38
UBE3B-203ENST00000434735 YTHDC1Q96MU7 727 aaKnown RBP17.4■□□□□ 0.38
UBE3B-203ENST00000434735 KCNH8Q96L42 1107 aa17.38■□□□□ 0.37
UBE3B-203ENST00000434735 SENP3Q9H4L4 574 aaPredicted RBP17.36■□□□□ 0.37
UBE3B-203ENST00000434735 DAXXQ9UER7 740 aaPredicted RBP17.36■□□□□ 0.37
UBE3B-203ENST00000434735 NEUROD1Q13562 356 aa17.35■□□□□ 0.37
UBE3B-203ENST00000434735 C14orf37Q86TY3 774 aa17.35■□□□□ 0.37
UBE3B-203ENST00000434735 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.28■□□□□ 0.36
UBE3B-203ENST00000434735 AEBP2Q6ZN18 517 aaPredicted RBP17.25■□□□□ 0.35
UBE3B-203ENST00000434735 BCL11AQ9H165 835 aa17.24■□□□□ 0.35
UBE3B-203ENST00000434735 NEFMP07197 916 aa17.22■□□□□ 0.35
UBE3B-203ENST00000434735 HAP1P54257 671 aaPredicted RBP17.21■□□□□ 0.35
UBE3B-203ENST00000434735 RB1CC1Q8TDY2 1594 aa17.19■□□□□ 0.34
UBE3B-203ENST00000434735 ZBTB7CA1YPR0 619 aa17.19■□□□□ 0.34
UBE3B-203ENST00000434735 PPP1R15AO75807 674 aaPredicted RBP17.17■□□□□ 0.34
UBE3B-203ENST00000434735 CSRNP3Q8WYN3 585 aa17.1■□□□□ 0.33
UBE3B-203ENST00000434735 TRIM26Q12899 539 aaPredicted RBP17.08■□□□□ 0.32
UBE3B-203ENST00000434735 MYT1Q01538 1121 aa17.07■□□□□ 0.32
UBE3B-203ENST00000434735 MLECQ14165 292 aa17.06■□□□□ 0.32
UBE3B-203ENST00000434735 CLSPNQ9HAW4 1339 aa17.06■□□□□ 0.32
UBE3B-203ENST00000434735 TSPY4P0CV99 314 aa17.05■□□□□ 0.32
UBE3B-203ENST00000434735 TSPY10P0CW01 314 aa17.05■□□□□ 0.32
UBE3B-203ENST00000434735 ZBTB47Q9UFB7 747 aaPredicted RBP17.04■□□□□ 0.32
UBE3B-203ENST00000434735 CHIC2Q9UKJ5 165 aa17.02■□□□□ 0.32
UBE3B-203ENST00000434735 PLEKHD1A6NEE1 506 aa16.98■□□□□ 0.31
UBE3B-203ENST00000434735 NPM2Q86SE8 214 aaKnown RBP16.97■□□□□ 0.31
UBE3B-203ENST00000434735 LMOD2Q6P5Q4 547 aa16.96■□□□□ 0.31
UBE3B-203ENST00000434735 CANXP27824 592 aaKnown RBP16.88■□□□□ 0.29
UBE3B-203ENST00000434735 ZNF316A6NFI3 1004 aaPredicted RBP16.86■□□□□ 0.29
UBE3B-203ENST00000434735 BAZ1BQ9UIG0 1483 aaKnown RBP16.86■□□□□ 0.29
UBE3B-203ENST00000434735 KDM2AQ9Y2K7 1162 aa16.83■□□□□ 0.28
UBE3B-203ENST00000434735 ARXQ96QS3 562 aa16.81■□□□□ 0.28
UBE3B-203ENST00000434735 MTUS2Q5JR59 1369 aa16.8■□□□□ 0.28
UBE3B-203ENST00000434735 CYB5RLQ6IPT4 315 aa16.76■□□□□ 0.27
UBE3B-203ENST00000434735 CCDC180Q9P1Z9 1646 aa16.72■□□□□ 0.27
UBE3B-203ENST00000434735 NACADO15069 1562 aa16.71■□□□□ 0.27
UBE3B-203ENST00000434735 NPHP1O15259 732 aa16.71■□□□□ 0.27
UBE3B-203ENST00000434735 RTL5Q5HYW3 569 aaPredicted RBP16.69■□□□□ 0.26
UBE3B-203ENST00000434735 CECR2Q9BXF3 1484 aa16.68■□□□□ 0.26
UBE3B-203ENST00000434735 CFDP1Q9UEE9 299 aaPredicted RBP16.67■□□□□ 0.26
UBE3B-203ENST00000434735 ZCCHC6Q5VYS8 1495 aaKnown RBP16.66■□□□□ 0.26
UBE3B-203ENST00000434735 RGL3Q3MIN7 710 aa16.66■□□□□ 0.26
UBE3B-203ENST00000434735 ANP32CO43423 234 aa16.64■□□□□ 0.25
UBE3B-203ENST00000434735 TMC1Q8TDI8 760 aa16.64■□□□□ 0.25
UBE3B-203ENST00000434735 RRP7BPQ9NSQ0 103 aa16.64■□□□□ 0.25
UBE3B-203ENST00000434735 CCDC9Q9Y3X0 531 aaKnown RBP16.61■□□□□ 0.25
UBE3B-203ENST00000434735 GGT6Q6P531 493 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 190.1 ms