Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CYSTM1Q9H1C7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CYSTM1Q9H1C7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC13□□□□□ -0.33
CYSTM1Q9H1C7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
CYSTM1Q9H1C7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC13□□□□□ -0.33
CYSTM1Q9H1C7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CYSTM1Q9H1C7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC13□□□□□ -0.33
CYSTM1Q9H1C7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CYSTM1Q9H1C7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CYSTM1Q9H1C7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CYSTM1Q9H1C7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CYSTM1Q9H1C7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CYSTM1Q9H1C7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CYSTM1Q9H1C7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CYSTM1Q9H1C7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CYSTM1Q9H1C7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CYSTM1Q9H1C7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CYSTM1Q9H1C7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CYSTM1Q9H1C7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CYSTM1Q9H1C7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC12.99□□□□□ -0.33
CYSTM1Q9H1C7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CYSTM1Q9H1C7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CYSTM1Q9H1C7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CYSTM1Q9H1C7 AL133373.2-201ENST00000623187 2828 ntBASIC12.98□□□□□ -0.33
CYSTM1Q9H1C7 AC004408.2-201ENST00000623613 2777 ntBASIC12.98□□□□□ -0.33
CYSTM1Q9H1C7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CYSTM1Q9H1C7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
CYSTM1Q9H1C7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CYSTM1Q9H1C7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CYSTM1Q9H1C7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CYSTM1Q9H1C7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC12.98□□□□□ -0.33
CYSTM1Q9H1C7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC12.98□□□□□ -0.33
CYSTM1Q9H1C7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CYSTM1Q9H1C7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CYSTM1Q9H1C7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC12.98□□□□□ -0.33
CYSTM1Q9H1C7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CYSTM1Q9H1C7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CYSTM1Q9H1C7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC12.97□□□□□ -0.33
CYSTM1Q9H1C7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CYSTM1Q9H1C7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CYSTM1Q9H1C7 AC092068.2-201ENST00000590491 1708 ntBASIC12.97□□□□□ -0.33
CYSTM1Q9H1C7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CYSTM1Q9H1C7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CYSTM1Q9H1C7 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CYSTM1Q9H1C7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CYSTM1Q9H1C7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CYSTM1Q9H1C7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CYSTM1Q9H1C7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CYSTM1Q9H1C7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC12.97□□□□□ -0.33
CYSTM1Q9H1C7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CYSTM1Q9H1C7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC12.97□□□□□ -0.33
CYSTM1Q9H1C7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CYSTM1Q9H1C7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CYSTM1Q9H1C7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
CYSTM1Q9H1C7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC12.96□□□□□ -0.33
CYSTM1Q9H1C7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CYSTM1Q9H1C7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CYSTM1Q9H1C7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC12.96□□□□□ -0.33
CYSTM1Q9H1C7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CYSTM1Q9H1C7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.33
CYSTM1Q9H1C7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CYSTM1Q9H1C7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CYSTM1Q9H1C7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC12.96□□□□□ -0.33
CYSTM1Q9H1C7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CYSTM1Q9H1C7 AC007613.1-201ENST00000572811 2597 ntBASIC12.96□□□□□ -0.34
CYSTM1Q9H1C7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CYSTM1Q9H1C7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CYSTM1Q9H1C7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
CYSTM1Q9H1C7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CYSTM1Q9H1C7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CYSTM1Q9H1C7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CYSTM1Q9H1C7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CYSTM1Q9H1C7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CYSTM1Q9H1C7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC12.95□□□□□ -0.34
CYSTM1Q9H1C7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CYSTM1Q9H1C7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CYSTM1Q9H1C7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CYSTM1Q9H1C7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC12.95□□□□□ -0.34
CYSTM1Q9H1C7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CYSTM1Q9H1C7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
CYSTM1Q9H1C7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CYSTM1Q9H1C7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC12.95□□□□□ -0.34
CYSTM1Q9H1C7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CYSTM1Q9H1C7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CYSTM1Q9H1C7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CYSTM1Q9H1C7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
CYSTM1Q9H1C7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CYSTM1Q9H1C7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CYSTM1Q9H1C7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CYSTM1Q9H1C7 BX323043.1-201ENST00000641006 1765 ntBASIC12.94□□□□□ -0.34
CYSTM1Q9H1C7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CYSTM1Q9H1C7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CYSTM1Q9H1C7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CYSTM1Q9H1C7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CYSTM1Q9H1C7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CYSTM1Q9H1C7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CYSTM1Q9H1C7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CYSTM1Q9H1C7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CYSTM1Q9H1C7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CYSTM1Q9H1C7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms