Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.86■□□□□ 0.61
NKX2-5P52952 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
NKX2-5P52952 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NKX2-5P52952 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.86■□□□□ 0.61
NKX2-5P52952 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-5P52952 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-5P52952 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.86■□□□□ 0.61
NKX2-5P52952 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-5P52952 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.86■□□□□ 0.61
NKX2-5P52952 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-5P52952 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-5P52952 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.86■□□□□ 0.61
NKX2-5P52952 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.86■□□□□ 0.61
NKX2-5P52952 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.86■□□□□ 0.61
NKX2-5P52952 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-5P52952 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-5P52952 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-5P52952 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-5P52952 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
NKX2-5P52952 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
NKX2-5P52952 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-5P52952 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NKX2-5P52952 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NKX2-5P52952 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
NKX2-5P52952 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NKX2-5P52952 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NKX2-5P52952 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NKX2-5P52952 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NKX2-5P52952 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC18.85■□□□□ 0.61
NKX2-5P52952 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
NKX2-5P52952 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NKX2-5P52952 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NKX2-5P52952 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.85■□□□□ 0.61
NKX2-5P52952 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.85■□□□□ 0.61
NKX2-5P52952 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
NKX2-5P52952 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.84■□□□□ 0.61
NKX2-5P52952 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.84■□□□□ 0.61
NKX2-5P52952 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.84■□□□□ 0.61
NKX2-5P52952 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NKX2-5P52952 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NKX2-5P52952 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.84■□□□□ 0.61
NKX2-5P52952 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NKX2-5P52952 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.61
NKX2-5P52952 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NKX2-5P52952 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
NKX2-5P52952 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NKX2-5P52952 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NKX2-5P52952 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.83■□□□□ 0.6
NKX2-5P52952 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
NKX2-5P52952 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
NKX2-5P52952 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
NKX2-5P52952 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NKX2-5P52952 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NKX2-5P52952 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NKX2-5P52952 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NKX2-5P52952 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX2-5P52952 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX2-5P52952 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NKX2-5P52952 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX2-5P52952 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NKX2-5P52952 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX2-5P52952 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX2-5P52952 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX2-5P52952 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NKX2-5P52952 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX2-5P52952 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NKX2-5P52952 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX2-5P52952 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX2-5P52952 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
NKX2-5P52952 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX2-5P52952 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.82■□□□□ 0.6
NKX2-5P52952 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
NKX2-5P52952 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.82■□□□□ 0.6
NKX2-5P52952 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-5P52952 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-5P52952 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-5P52952 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.81■□□□□ 0.6
NKX2-5P52952 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.81■□□□□ 0.6
NKX2-5P52952 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-5P52952 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-5P52952 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.81■□□□□ 0.6
NKX2-5P52952 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-5P52952 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-5P52952 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
NKX2-5P52952 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-5P52952 AFG3L1P-217ENST00000557444 2447 ntBASIC18.81■□□□□ 0.6
NKX2-5P52952 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
NKX2-5P52952 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-5P52952 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX2-5P52952 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
NKX2-5P52952 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX2-5P52952 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NKX2-5P52952 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.8■□□□□ 0.6
NKX2-5P52952 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NKX2-5P52952 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NKX2-5P52952 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX2-5P52952 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.8■□□□□ 0.6
NKX2-5P52952 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NKX2-5P52952 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX2-5P52952 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms