Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 ANAPC10-216ENST00000514704 815 ntTSL 510.09□□□□□ -0.793e-6■■■■□ 22.2
NCBP2P52298 ANAPC10-205ENST00000502847 608 ntTSL 310.09□□□□□ -0.793e-6■■■■□ 22.2
NCBP2P52298 C18orf21-204ENST00000587873 656 ntTSL 1 (best)9.88□□□□□ -0.833e-6■■■■□ 22.2
NCBP2P52298 MIR4442-201ENST00000583412 67 ntBASIC9.79□□□□□ -0.843e-6■■■■□ 22.2
NCBP2P52298 ANAPC10-204ENST00000502651 867 ntTSL 29.4□□□□□ -0.93e-6■■■■□ 22.2
NCBP2P52298 ANAPC10-218ENST00000641499 1538 nt9.27□□□□□ -0.933e-6■■■■□ 22.2
NCBP2P52298 MTBP-201ENST00000305949 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.933e-6■■■■□ 22.2
NCBP2P52298 RPS27-202ENST00000392558 625 ntTSL 2 BASIC8.62□□□□□ -1.033e-6■■■■□ 22.2
NCBP2P52298 GTPBP10-204ENST00000417207 775 ntTSL 58.56□□□□□ -1.043e-6■■■■□ 22.2
NCBP2P52298 SSX2IP-206ENST00000476905 2272 ntTSL 28.26□□□□□ -1.093e-6■■■■□ 22.2
NCBP2P52298 ACSM3-215ENST00000614721 3311 ntTSL 1 (best)8.21□□□□□ -1.093e-6■■■■□ 22.2
NCBP2P52298 GABPB1-205ENST00000429662 1392 ntTSL 1 (best) BASIC8.16□□□□□ -1.13e-6■■■■□ 22.2
NCBP2P52298 ANAPC10-209ENST00000507656 1025 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.123e-6■■■■□ 22.2
NCBP2P52298 ANAPC10-207ENST00000506851 471 ntTSL 37.93□□□□□ -1.143e-6■■■■□ 22.2
NCBP2P52298 GTPBP10-212ENST00000477972 490 ntTSL 47.74□□□□□ -1.173e-6■■■■□ 22.2
NCBP2P52298 ANAPC10-215ENST00000514390 794 ntTSL 37.69□□□□□ -1.183e-6■■■■□ 22.2
NCBP2P52298 ANAPC10-208ENST00000507134 853 ntTSL 37.53□□□□□ -1.23e-6■■■■□ 22.2
NCBP2P52298 GTPBP10-209ENST00000453512 636 ntTSL 57.3□□□□□ -1.243e-6■■■■□ 22.2
NCBP2P52298 GTPBP10-205ENST00000421719 686 ntTSL 57.3□□□□□ -1.243e-6■■■■□ 22.2
NCBP2P52298 TCTE3-201ENST00000366774 769 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.253e-6■■■■□ 22.2
NCBP2P52298 ANAPC10-202ENST00000451299 928 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.263e-6■■■■□ 22.2
NCBP2P52298 ANAPC10-211ENST00000510270 963 ntTSL 37.16□□□□□ -1.263e-6■■■■□ 22.2
NCBP2P52298 ZNF426-205ENST00000635810 582 ntTSL 57.14□□□□□ -1.273e-6■■■■□ 22.2
NCBP2P52298 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.283e-6■■■■□ 22.2
NCBP2P52298 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC6.93□□□□□ -1.33e-6■■■■□ 22.2
NCBP2P52298 GTPBP10-207ENST00000439832 545 ntTSL 26.88□□□□□ -1.313e-6■■■■□ 22.2
NCBP2P52298 GTPBP10-203ENST00000380058 6913 ntTSL 1 (best)6.68□□□□□ -1.343e-6■■■■□ 22.2
NCBP2P52298 ANAPC10-214ENST00000513054 689 ntTSL 35.63□□□□□ -1.513e-6■■■■□ 22.2
NCBP2P52298 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.553e-6■■■■□ 22.2
NCBP2P52298 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.63e-6■■■■□ 22.2
NCBP2P52298 GTPBP10-208ENST00000450619 856 ntTSL 54.62□□□□□ -1.673e-6■■■■□ 22.2
NCBP2P52298 GTPBP10-206ENST00000426366 778 ntTSL 54.62□□□□□ -1.673e-6■■■■□ 22.2
NCBP2P52298 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.79□□□□□ -1.83e-6■■■■□ 22.2
NCBP2P52298 ANAPC10-203ENST00000502562 743 ntTSL 33.66□□□□□ -1.823e-6■■■■□ 22.2
NCBP2P52298 ANAPC10-212ENST00000511466 687 ntTSL 23.36□□□□□ -1.873e-6■■■■□ 22.2
NCBP2P52298 ANAPC10-210ENST00000508087 749 ntTSL 33.36□□□□□ -1.873e-6■■■■□ 22.2
NCBP2P52298 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.373e-6■■■■□ 22.2
NCBP2P52298 LZTS2-207ENST00000489526 802 ntTSL 217.84■□□□□ 0.451e-6■■■■□ 22.2
NCBP2P52298 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.411e-6■■■■□ 22.2
NCBP2P52298 LZTS2-203ENST00000426584 816 ntTSL 314.88□□□□□ -0.031e-6■■■■□ 22.2
NCBP2P52298 MIR194-2HG-201ENST00000413053 3647 ntTSL 2 BASIC11.05□□□□□ -0.641e-11■■■■□ 22.2
NCBP2P52298 PBRM1-217ENST00000450271 517 ntTSL 523.83■■□□□ 1.417e-6■■■■□ 22.1
NCBP2P52298 PBRM1-218ENST00000458294 476 ntTSL 323.68■■□□□ 1.387e-6■■■■□ 22.1
NCBP2P52298 PBRM1-210ENST00000420148 783 ntTSL 323.51■■□□□ 1.357e-6■■■■□ 22.1
NCBP2P52298 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.64■■□□□ 1.214e-7■■■■□ 22.1
NCBP2P52298 MTX2-205ENST00000452865 817 ntTSL 321.89■■□□□ 1.098e-9■■■■□ 22.1
NCBP2P52298 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.89■■□□□ 1.098e-9■■■■□ 22.1
NCBP2P52298 PDIA5-207ENST00000489923 1651 ntTSL 1 (best)21.83■■□□□ 1.091e-10■■■■□ 22.1
NCBP2P52298 MTX2-203ENST00000423461 618 ntTSL 321.4■■□□□ 1.028e-9■■■■□ 22.1
NCBP2P52298 PBRM1-213ENST00000431678 809 ntTSL 521.18■□□□□ 0.987e-6■■■■□ 22.1
NCBP2P52298 CRTC2-201ENST00000303569 2290 ntTSL 520.98■□□□□ 0.957e-7■■■■□ 22.1
NCBP2P52298 SLC25A39-206ENST00000585695 1121 ntTSL 220.95■□□□□ 0.942e-6■■■■□ 22.1
NCBP2P52298 SLC25A39-205ENST00000585636 561 ntTSL 220.95■□□□□ 0.942e-6■■■■□ 22.1
NCBP2P52298 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.95■□□□□ 0.942e-6■■■■□ 22.1
NCBP2P52298 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.9■□□□□ 0.944e-7■■■■□ 22.1
NCBP2P52298 MTX2-202ENST00000420864 1592 ntTSL 1 (best)20.9■□□□□ 0.948e-9■■■■□ 22.1
NCBP2P52298 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.857e-7■■■■□ 22.1
NCBP2P52298 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.822e-6■■■■□ 22.1
NCBP2P52298 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.798e-9■■■■□ 22.1
NCBP2P52298 RETREG3-202ENST00000585726 522 ntTSL 419.93■□□□□ 0.782e-8■■■■□ 22.1
NCBP2P52298 RETREG3-204ENST00000586796 576 ntTSL 219.93■□□□□ 0.782e-8■■■■□ 22.1
NCBP2P52298 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.764e-7■■■■□ 22.1
NCBP2P52298 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.662e-6■■■■□ 22.1
NCBP2P52298 SLC25A39-210ENST00000588315 1409 ntTSL 218.93■□□□□ 0.622e-6■■■■□ 22.1
NCBP2P52298 UPF3A-211ENST00000618700 1210 ntTSL 218.37■□□□□ 0.534e-7■■■■□ 22.1
NCBP2P52298 SLC25A39-204ENST00000585523 574 ntTSL 417.87■□□□□ 0.452e-6■■■■□ 22.1
NCBP2P52298 SLC25A39-209ENST00000588049 839 ntTSL 517.87■□□□□ 0.452e-6■■■■□ 22.1
NCBP2P52298 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.442e-6■■■■□ 22.1
NCBP2P52298 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.431e-10■■■■□ 22.1
NCBP2P52298 RETREG3-205ENST00000586870 1632 ntTSL 217.39■□□□□ 0.372e-8■■■■□ 22.1
NCBP2P52298 MCFD2-213ENST00000470873 552 ntTSL 416.66■□□□□ 0.267e-6■■■■□ 22.1
NCBP2P52298 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.261e-6■■■■□ 22.1
NCBP2P52298 UPF3A-206ENST00000480362 965 ntTSL 516.53■□□□□ 0.244e-7■■■■□ 22.1
NCBP2P52298 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.184e-20■■■■□ 22.1
NCBP2P52298 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.88■□□□□ 0.137e-6■■■■□ 22.1
NCBP2P52298 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.137e-6■■■■□ 22.1
NCBP2P52298 SLC25A39-208ENST00000586633 566 ntTSL 315.84■□□□□ 0.132e-6■■■■□ 22.1
NCBP2P52298 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.117e-6■■■■□ 22.1
NCBP2P52298 RETREG3-212ENST00000593251 565 ntTSL 415.7■□□□□ 0.12e-8■■■■□ 22.1
NCBP2P52298 LRBA-210ENST00000510841 2288 ntTSL 215.5■□□□□ 0.077e-6■■■■□ 22.1
NCBP2P52298 RETREG3-210ENST00000590541 409 ntTSL 415.47■□□□□ 0.072e-8■■■■□ 22.1
NCBP2P52298 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.93□□□□□ -0.027e-7■■■■□ 22.1
NCBP2P52298 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.027e-6■■■■□ 22.1
NCBP2P52298 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.037e-6■■■■□ 22.1
NCBP2P52298 RETREG3-206ENST00000588423 559 ntTSL 414.8□□□□□ -0.042e-8■■■■□ 22.1
NCBP2P52298 UPF3A-208ENST00000484246 699 ntTSL 314.68□□□□□ -0.064e-7■■■■□ 22.1
NCBP2P52298 MCFD2-214ENST00000477791 665 ntTSL 214.66□□□□□ -0.067e-6■■■■□ 22.1
NCBP2P52298 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.63□□□□□ -0.077e-6■■■■□ 22.1
NCBP2P52298 MCFD2-217ENST00000493804 807 ntTSL 214.31□□□□□ -0.127e-6■■■■□ 22.1
NCBP2P52298 BANF1-203ENST00000524628 612 ntTSL 214.24□□□□□ -0.137e-6■■■■□ 22.1
NCBP2P52298 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.147e-6■■■■□ 22.1
NCBP2P52298 RETREG3-208ENST00000589797 4149 ntTSL 214.09□□□□□ -0.152e-8■■■■□ 22.1
NCBP2P52298 MCFD2-216ENST00000487121 627 ntTSL 313.95□□□□□ -0.187e-6■■■■□ 22.1
NCBP2P52298 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.88□□□□□ -0.192e-6■■■■□ 22.1
NCBP2P52298 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.197e-6■■■■□ 22.1
NCBP2P52298 TIMM10B-202ENST00000528908 593 ntTSL 1 (best)13.8□□□□□ -0.29e-7■■■■□ 22.1
NCBP2P52298 ITGA5-202ENST00000435631 1240 ntTSL 213.74□□□□□ -0.217e-6■■■■□ 22.1
NCBP2P52298 LRBA-212ENST00000514435 2140 ntTSL 213.37□□□□□ -0.277e-6■■■■□ 22.1
NCBP2P52298 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.277e-6■■■■□ 22.1
NCBP2P52298 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.06□□□□□ -0.327e-6■■■■□ 22.1
Retrieved 100 of 18,329 protein–RNA pairs in 334.3 ms