RNA–Protein interactions for RNA: ENST00000524628.1

BANF1-203, Transcript of barrier to autointegration factor 1, humanhuman

TSL 2

Gene BANF1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BANF1-203ENST00000524628 NISCHQ9Y2I1 1504 aa36.14■■■■□ 3.38
BANF1-203ENST00000524628 CCDC180Q9P1Z9 1646 aa31.98■■■□□ 2.71
BANF1-203ENST00000524628 ABCC9O60706 1549 aa30.93■■■□□ 2.54
BANF1-203ENST00000524628 DCAF8L2P0C7V8 631 aa30.18■■■□□ 2.42
BANF1-203ENST00000524628 ZCCHC6Q5VYS8 1495 aaKnown RBP30.16■■■□□ 2.42
BANF1-203ENST00000524628 NACADO15069 1562 aa30.02■■■□□ 2.4
BANF1-203ENST00000524628 RB1CC1Q8TDY2 1594 aa29.96■■■□□ 2.39
BANF1-203ENST00000524628 MYO15BQ96JP2 1530 aa29.94■■■□□ 2.38
BANF1-203ENST00000524628 DCAF1Q9Y4B6 1507 aa29.94■■■□□ 2.38
BANF1-203ENST00000524628 UNC13AQ9UPW8 1703 aa29.2■■■□□ 2.26
BANF1-203ENST00000524628 SCRIBQ14160 1630 aa29.19■■■□□ 2.26
BANF1-203ENST00000524628 PABPN1Q86U42 306 aaKnown RBP eCLIP28.99■■■□□ 2.23
BANF1-203ENST00000524628 BICRAQ9NZM4 1560 aa28.94■■■□□ 2.22
BANF1-203ENST00000524628 SHROOM4Q9ULL8 1493 aa28.78■■■□□ 2.2
BANF1-203ENST00000524628 EIF4G1Q04637 1599 aaKnown RBP28.19■■■□□ 2.1
BANF1-203ENST00000524628 CECR2Q9BXF3 1484 aa28.08■■■□□ 2.09
BANF1-203ENST00000524628 DNAJC5BQ9UF47 199 aa28.02■■■□□ 2.08
BANF1-203ENST00000524628 BAZ1AQ9NRL2 1556 aaPredicted RBP28.02■■■□□ 2.08
BANF1-203ENST00000524628 CC2D2AQ9P2K1 1620 aa28■■■□□ 2.07
BANF1-203ENST00000524628 SMARCA4P51532 1647 aa27.96■■■□□ 2.07
BANF1-203ENST00000524628 MROH2BQ7Z745 1585 aa27.83■■■□□ 2.05
BANF1-203ENST00000524628 SMARCA2P51531 1590 aa27.76■■■□□ 2.03
BANF1-203ENST00000524628 ATAD2BQ9ULI0 1458 aa27.73■■■□□ 2.03
BANF1-203ENST00000524628 NCAPD3P42695 1498 aa27.68■■■□□ 2.02
BANF1-203ENST00000524628 RSF1Q96T23 1441 aaPredicted RBP27.67■■■□□ 2.02
BANF1-203ENST00000524628 PEG3Q9GZU2 1588 aa27.67■■■□□ 2.02
BANF1-203ENST00000524628 HMGXB3Q12766 1538 aa27.56■■■□□ 2
BANF1-203ENST00000524628 WIZO95785 1651 aa27.56■■■□□ 2
BANF1-203ENST00000524628 BAZ1BQ9UIG0 1483 aaKnown RBP27.55■■■□□ 2
BANF1-203ENST00000524628 SUPT5HO00267 1087 aaKnown RBP27.34■■□□□ 1.97
BANF1-203ENST00000524628 TOP2AP11388 1531 aaKnown RBP27.31■■□□□ 1.96
BANF1-203ENST00000524628 CCDC88BA6NC98 1476 aa27■■□□□ 1.91
BANF1-203ENST00000524628 CADPSQ9ULU8 1353 aa26.91■■□□□ 1.9
BANF1-203ENST00000524628 LAMC3Q9Y6N6 1575 aa26.89■■□□□ 1.9
BANF1-203ENST00000524628 NESP48681 1621 aa26.84■■□□□ 1.89
BANF1-203ENST00000524628 CFTRP13569 1480 aa26.8■■□□□ 1.88
BANF1-203ENST00000524628 PDS5BQ9NTI5 1447 aa26.75■■□□□ 1.87
BANF1-203ENST00000524628 ERCC6Q03468 1493 aa26.7■■□□□ 1.87
BANF1-203ENST00000524628 PRDM2Q13029 1718 aa26.62■■□□□ 1.85
BANF1-203ENST00000524628 FANCD2Q9BXW9 1451 aa26.58■■□□□ 1.85
BANF1-203ENST00000524628 KIF21AQ7Z4S6 1674 aa26.54■■□□□ 1.84
BANF1-203ENST00000524628 CEP164Q9UPV0 1460 aa26.53■■□□□ 1.84
BANF1-203ENST00000524628 MRC2Q9UBG0 1479 aa26.4■■□□□ 1.82
BANF1-203ENST00000524628 THOC2Q8NI27 1593 aaKnown RBP26.34■■□□□ 1.81
BANF1-203ENST00000524628 ABCC8Q09428 1581 aa26.29■■□□□ 1.8
BANF1-203ENST00000524628 WDR62O43379 1518 aa26.27■■□□□ 1.8
BANF1-203ENST00000524628 CUX2O14529 1486 aa26.26■■□□□ 1.79
BANF1-203ENST00000524628 URB2Q14146 1524 aaKnown RBP26.24■■□□□ 1.79
BANF1-203ENST00000524628 DNMBPQ6XZF7 1577 aa26.19■■□□□ 1.78
BANF1-203ENST00000524628 TOPBP1Q92547 1522 aa26.19■■□□□ 1.78
BANF1-203ENST00000524628 WRNQ14191 1432 aaPredicted RBP eCLIP26.12■■□□□ 1.77
BANF1-203ENST00000524628 CUX1P39880 1505 aa26.09■■□□□ 1.77
BANF1-203ENST00000524628 TOP2BQ02880 1626 aa25.99■■□□□ 1.75
BANF1-203ENST00000524628 POLA1P09884 1462 aaPredicted RBP25.98■■□□□ 1.75
BANF1-203ENST00000524628 BIVM-ERCC5R4GMW8 1640 aa25.97■■□□□ 1.75
BANF1-203ENST00000524628 FGD5Q6ZNL6 1462 aa25.97■■□□□ 1.75
BANF1-203ENST00000524628 IFT140Q96RY7 1462 aa25.97■■□□□ 1.75
BANF1-203ENST00000524628 SYNJ1O43426 1573 aa25.96■■□□□ 1.75
BANF1-203ENST00000524628 SOGA1O94964 1423 aa25.94■■□□□ 1.74
BANF1-203ENST00000524628 RAD54L2Q9Y4B4 1467 aa25.85■■□□□ 1.73
BANF1-203ENST00000524628 TRIM41Q8WV44 630 aa25.84■■□□□ 1.73
BANF1-203ENST00000524628 TARBP1Q13395 1621 aaKnown RBP25.84■■□□□ 1.73
BANF1-203ENST00000524628 ABCA10Q8WWZ4 1543 aa25.75■■□□□ 1.71
BANF1-203ENST00000524628 ZNF608Q9ULD9 1512 aaPredicted RBP25.74■■□□□ 1.71
BANF1-203ENST00000524628 WDR97A6NE52 1622 aa25.72■■□□□ 1.71
BANF1-203ENST00000524628 TDRD9Q8NDG6 1382 aaKnown RBP25.71■■□□□ 1.71
BANF1-203ENST00000524628 CHIC1Q5VXU3 224 aa25.7■■□□□ 1.7
BANF1-203ENST00000524628 AQRO60306 1485 aaKnown RBP eCLIP25.69■■□□□ 1.73e-6■■■■□ 19.4
BANF1-203ENST00000524628 EIF4G3O43432 1585 aaKnown RBP25.66■■□□□ 1.7
BANF1-203ENST00000524628 GAPVD1Q14C86 1478 aa25.63■■□□□ 1.69
BANF1-203ENST00000524628 KIF27Q86VH2 1401 aa25.58■■□□□ 1.69
BANF1-203ENST00000524628 ABCA5Q8WWZ7 1642 aa25.58■■□□□ 1.69
BANF1-203ENST00000524628 GRIN2BQ13224 1484 aa25.58■■□□□ 1.69
BANF1-203ENST00000524628 PBRM1Q86U86 1689 aa25.5■■□□□ 1.67
BANF1-203ENST00000524628 ERICH3Q5RHP9 1530 aa25.47■■□□□ 1.67
BANF1-203ENST00000524628 MAGI1Q96QZ7 1491 aaPredicted RBP25.47■■□□□ 1.67
BANF1-203ENST00000524628 SNAPC4Q5SXM2 1469 aa25.45■■□□□ 1.66
BANF1-203ENST00000524628 FBLN2P98095 1184 aa25.4■■□□□ 1.66
BANF1-203ENST00000524628 CHMP7Q8WUX9 453 aaPredicted RBP25.4■■□□□ 1.66
BANF1-203ENST00000524628 IGF1RP08069 1367 aa25.4■■□□□ 1.66
BANF1-203ENST00000524628 RUSC2Q8N2Y8 1516 aa25.36■■□□□ 1.65
BANF1-203ENST00000524628 EEA1Q15075 1411 aa25.36■■□□□ 1.65
BANF1-203ENST00000524628 SYNJ2O15056 1496 aa25.35■■□□□ 1.65
BANF1-203ENST00000524628 FHAD1B1AJZ9 1412 aa25.35■■□□□ 1.65
BANF1-203ENST00000524628 ADAMTS12P58397 1594 aa25.31■■□□□ 1.64
BANF1-203ENST00000524628 OSCARQ8IYS5 282 aa25.31■■□□□ 1.64
BANF1-203ENST00000524628 CUL7Q14999 1698 aa25.31■■□□□ 1.64
BANF1-203ENST00000524628 CHD1O14646 1710 aa25.29■■□□□ 1.64
BANF1-203ENST00000524628 CARMIL1Q5VZK9 1371 aa25.28■■□□□ 1.64
BANF1-203ENST00000524628 CSRNP3Q8WYN3 585 aa25.27■■□□□ 1.64
BANF1-203ENST00000524628 FAM9AQ8IZU1 332 aaPredicted RBP25.25■■□□□ 1.63
BANF1-203ENST00000524628 GRIN2AQ12879 1464 aa25.21■■□□□ 1.63
BANF1-203ENST00000524628 RAPGEF2Q9Y4G8 1499 aa25.16■■□□□ 1.62
BANF1-203ENST00000524628 PRXQ9BXM0 1461 aa25.12■■□□□ 1.61
BANF1-203ENST00000524628 NUP160Q12769 1436 aa25.08■■□□□ 1.61
BANF1-203ENST00000524628 DNAJC5Q9H3Z4 198 aa25.05■■□□□ 1.6
BANF1-203ENST00000524628 CEP170Q5SW79 1584 aa25.03■■□□□ 1.6
BANF1-203ENST00000524628 CLASP1Q7Z460 1538 aa25■■□□□ 1.59
BANF1-203ENST00000524628 KIF21BO75037 1637 aa24.99■■□□□ 1.59
BANF1-203ENST00000524628 KIAA0586Q9BVV6 1533 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms