Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNOT4O95628 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CNOT4O95628 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNOT4O95628 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CNOT4O95628 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNOT4O95628 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNOT4O95628 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CNOT4O95628 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CNOT4O95628 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNOT4O95628 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.53■□□□□ 0.72
CNOT4O95628 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.53■□□□□ 0.72
CNOT4O95628 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CNOT4O95628 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CNOT4O95628 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNOT4O95628 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNOT4O95628 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNOT4O95628 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CNOT4O95628 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.53■□□□□ 0.72
CNOT4O95628 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNOT4O95628 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CNOT4O95628 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
CNOT4O95628 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CNOT4O95628 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.52■□□□□ 0.72
CNOT4O95628 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNOT4O95628 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNOT4O95628 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNOT4O95628 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNOT4O95628 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.52■□□□□ 0.72
CNOT4O95628 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CNOT4O95628 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNOT4O95628 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNOT4O95628 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNOT4O95628 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNOT4O95628 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.52■□□□□ 0.72
CNOT4O95628 ANOS2P-203ENST00000472227 1816 ntBASIC19.52■□□□□ 0.72
CNOT4O95628 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
CNOT4O95628 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
CNOT4O95628 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.52■□□□□ 0.71
CNOT4O95628 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNOT4O95628 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNOT4O95628 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.51■□□□□ 0.71
CNOT4O95628 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNOT4O95628 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.51■□□□□ 0.71
CNOT4O95628 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.51■□□□□ 0.71
CNOT4O95628 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CNOT4O95628 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNOT4O95628 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNOT4O95628 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CNOT4O95628 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNOT4O95628 AC099791.1-201ENST00000416440 715 ntBASIC19.5■□□□□ 0.71
CNOT4O95628 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.5■□□□□ 0.71
CNOT4O95628 AC008764.7-201ENST00000593779 1081 ntBASIC19.5■□□□□ 0.71
CNOT4O95628 CA15P2-201ENST00000611168 834 ntBASIC19.5■□□□□ 0.71
CNOT4O95628 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.5■□□□□ 0.71
CNOT4O95628 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNOT4O95628 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNOT4O95628 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.5■□□□□ 0.71
CNOT4O95628 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNOT4O95628 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.49■□□□□ 0.71
CNOT4O95628 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNOT4O95628 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNOT4O95628 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.49■□□□□ 0.71
CNOT4O95628 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.49■□□□□ 0.71
CNOT4O95628 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNOT4O95628 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNOT4O95628 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.49■□□□□ 0.71
CNOT4O95628 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNOT4O95628 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.49■□□□□ 0.71
CNOT4O95628 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CNOT4O95628 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.49■□□□□ 0.71
CNOT4O95628 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNOT4O95628 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.49■□□□□ 0.71
CNOT4O95628 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CNOT4O95628 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.49■□□□□ 0.71
CNOT4O95628 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNOT4O95628 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CNOT4O95628 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNOT4O95628 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNOT4O95628 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.49■□□□□ 0.71
CNOT4O95628 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNOT4O95628 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNOT4O95628 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNOT4O95628 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNOT4O95628 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNOT4O95628 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNOT4O95628 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CNOT4O95628 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.48■□□□□ 0.71
CNOT4O95628 SLC47A1P1-202ENST00000449666 945 ntBASIC19.48■□□□□ 0.71
CNOT4O95628 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.48■□□□□ 0.71
CNOT4O95628 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.48■□□□□ 0.71
CNOT4O95628 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.48■□□□□ 0.71
CNOT4O95628 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.48■□□□□ 0.71
CNOT4O95628 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.48■□□□□ 0.71
CNOT4O95628 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CNOT4O95628 AC068587.7-201ENST00000641602 218 ntBASIC19.48■□□□□ 0.71
CNOT4O95628 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CNOT4O95628 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNOT4O95628 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CNOT4O95628 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.48■□□□□ 0.71
CNOT4O95628 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms