Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.231e-6■□□□□ 9.6
U2AF2P26368 RBM14-RBM4-202ENST00000421355 2034 ntTSL 221.96■■□□□ 1.111e-6■□□□□ 9.6
U2AF2P26368 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.54■□□□□ 0.881e-6■□□□□ 9.6
U2AF2P26368 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.44■□□□□ 0.71e-6■□□□□ 9.6
U2AF2P26368 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.611e-6■□□□□ 9.6
U2AF2P26368 RBM14-205ENST00000443702 732 ntTSL 3 BASIC14.64□□□□□ -0.071e-6■□□□□ 9.6
U2AF2P26368 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC14.55□□□□□ -0.081e-6■□□□□ 9.6
U2AF2P26368 RBM14-RBM4-204ENST00000511114 523 ntTSL 413.93□□□□□ -0.181e-6■□□□□ 9.6
U2AF2P26368 RBM14-203ENST00000409372 876 ntTSL 2 BASIC13.65□□□□□ -0.221e-6■□□□□ 9.6
U2AF2P26368 RBM14-208ENST00000496694 562 ntTSL 57.86□□□□□ -1.151e-6■□□□□ 9.6
U2AF2P26368 TAF1D-207ENST00000527169 1127 ntTSL 520■□□□□ 0.794e-10■□□□□ 9.6
U2AF2P26368 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.694e-10■□□□□ 9.6
U2AF2P26368 TAF1D-216ENST00000532235 334 ntTSL 318.1■□□□□ 0.494e-10■□□□□ 9.6
U2AF2P26368 TAF1D-217ENST00000532455 565 ntTSL 417.46■□□□□ 0.394e-10■□□□□ 9.6
U2AF2P26368 TAF1D-220ENST00000534770 737 ntTSL 317.38■□□□□ 0.374e-10■□□□□ 9.6
U2AF2P26368 NELFCD-209ENST00000486263 708 ntTSL 215.86■□□□□ 0.132e-13■□□□□ 9.6
U2AF2P26368 NELFCD-207ENST00000479207 1112 ntTSL 312.97□□□□□ -0.332e-13■□□□□ 9.6
U2AF2P26368 PSMD2-211ENST00000466987 530 ntTSL 212.03□□□□□ -0.484e-10■□□□□ 9.6
U2AF2P26368 PSMD2-209ENST00000460628 565 ntTSL 210.33□□□□□ -0.764e-10■□□□□ 9.6
U2AF2P26368 NELFCD-206ENST00000478389 3581 ntTSL 210.16□□□□□ -0.782e-13■□□□□ 9.6
U2AF2P26368 PSMD2-217ENST00000491149 895 ntTSL 210.02□□□□□ -0.814e-10■□□□□ 9.6
U2AF2P26368 NUMB-219ENST00000555987 557 ntTSL 423.04■■□□□ 1.284e-7■□□□□ 9.6
U2AF2P26368 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.274e-7■□□□□ 9.6
U2AF2P26368 NUMB-215ENST00000555307 1039 ntTSL 515.72■□□□□ 0.114e-7■□□□□ 9.6
U2AF2P26368 NUMB-209ENST00000554315 1740 ntTSL 1 (best)15.53■□□□□ 0.084e-7■□□□□ 9.6
U2AF2P26368 NUMB-212ENST00000554546 3607 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.154e-7■□□□□ 9.6
U2AF2P26368 NUMB-202ENST00000356296 3453 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.494e-7■□□□□ 9.6
U2AF2P26368 NUMB-205ENST00000544991 2757 ntTSL 5 BASIC10.09□□□□□ -0.794e-7■□□□□ 9.6
U2AF2P26368 NUMB-210ENST00000554394 954 ntTSL 39.67□□□□□ -0.864e-7■□□□□ 9.6
U2AF2P26368 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.024e-7■□□□□ 9.6
U2AF2P26368 NUMB-211ENST00000554521 1406 ntTSL 1 (best) BASIC8.59□□□□□ -1.034e-7■□□□□ 9.6
U2AF2P26368 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC8.53□□□□□ -1.044e-7■□□□□ 9.6
U2AF2P26368 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.074e-7■□□□□ 9.6
U2AF2P26368 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC8.25□□□□□ -1.094e-7■□□□□ 9.6
U2AF2P26368 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC8.25□□□□□ -1.094e-7■□□□□ 9.6
U2AF2P26368 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC8□□□□□ -1.134e-7■□□□□ 9.6
U2AF2P26368 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.86□□□□□ -1.154e-7■□□□□ 9.6
U2AF2P26368 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.86□□□□□ -1.154e-7■□□□□ 9.6
U2AF2P26368 NUMB-218ENST00000555859 906 ntTSL 26.73□□□□□ -1.334e-7■□□□□ 9.6
U2AF2P26368 NUMB-220ENST00000556112 568 ntTSL 44.82□□□□□ -1.644e-7■□□□□ 9.6
U2AF2P26368 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.26■□□□□ 0.832e-6■□□□□ 9.6
U2AF2P26368 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.782e-6■□□□□ 9.6
U2AF2P26368 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.492e-6■□□□□ 9.6
U2AF2P26368 DDX3Y-204ENST00000454054 1049 ntTSL 35.57□□□□□ -1.521e-9■□□□□ 9.5
U2AF2P26368 DDX3Y-203ENST00000440554 792 ntTSL 35.47□□□□□ -1.531e-9■□□□□ 9.5
U2AF2P26368 DDX3Y-206ENST00000469101 507 ntTSL 32.9□□□□□ -1.951e-9■□□□□ 9.5
U2AF2P26368 SEPT2-222ENST00000449239 599 ntTSL 26.11□□□□□ -1.439e-10■□□□□ 9.5
U2AF2P26368 PSME4-209ENST00000488687 3073 ntTSL 27.09□□□□□ -1.271e-9■□□□□ 9.5
U2AF2P26368 SEPT2-244ENST00000495463 501 ntTSL 432.19■■■□□ 2.749e-10■□□□□ 9.5
U2AF2P26368 SEPT2-234ENST00000475474 749 ntTSL 229.23■■■□□ 2.279e-10■□□□□ 9.5
U2AF2P26368 SEPT2-238ENST00000482304 740 ntTSL 228.2■■■□□ 2.19e-10■□□□□ 9.5
U2AF2P26368 SEPT2-216ENST00000434955 480 ntTSL 325.36■■□□□ 1.659e-10■□□□□ 9.5
U2AF2P26368 SEPT2-212ENST00000425899 738 ntTSL 511.39□□□□□ -0.599e-10■□□□□ 9.5
U2AF2P26368 SEPT2-207ENST00000407017 650 ntTSL 48.32□□□□□ -1.089e-10■□□□□ 9.5
U2AF2P26368 SEPT2-241ENST00000484740 563 ntTSL 36.42□□□□□ -1.389e-10■□□□□ 9.5
U2AF2P26368 SEPT2-233ENST00000473479 659 ntTSL 23.42□□□□□ -1.869e-10■□□□□ 9.5
U2AF2P26368 AKR1C3-210ENST00000605322 846 ntTSL 1 (best)5.15□□□□□ -1.595e-8■□□□□ 9.5
U2AF2P26368 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.97■□□□□ 0.632e-6■□□□□ 9.5
U2AF2P26368 TTC17-214ENST00000534347 889 ntTSL 318.01■□□□□ 0.479e-6■□□□□ 9.5
U2AF2P26368 LSS-211ENST00000522411 2523 ntTSL 2 BASIC16.9■□□□□ 0.32e-6■□□□□ 9.5
U2AF2P26368 RTN3-211ENST00000542238 735 ntTSL 316.81■□□□□ 0.289e-6■□□□□ 9.5
U2AF2P26368 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.262e-6■□□□□ 9.5
U2AF2P26368 LIG3-205ENST00000585941 1699 ntTSL 1 (best)16.44■□□□□ 0.229e-6■□□□□ 9.5
U2AF2P26368 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.142e-6■□□□□ 9.5
U2AF2P26368 RTN3-214ENST00000545432 545 ntTSL 415.91■□□□□ 0.149e-6■□□□□ 9.5
U2AF2P26368 RTN3-212ENST00000543123 712 ntTSL 214.49□□□□□ -0.099e-6■□□□□ 9.5
U2AF2P26368 RTN3-213ENST00000543552 529 ntTSL 414.49□□□□□ -0.099e-6■□□□□ 9.5
U2AF2P26368 RTN3-209ENST00000538995 814 ntTSL 212.91□□□□□ -0.349e-6■□□□□ 9.5
U2AF2P26368 RTN3-201ENST00000338850 493 ntTSL 212.41□□□□□ -0.429e-6■□□□□ 9.5
U2AF2P26368 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.41□□□□□ -1.79e-6■□□□□ 9.5
U2AF2P26368 SLC25A36-206ENST00000502756 796 ntTSL 226.56■■□□□ 1.841e-7■□□□□ 9.5
U2AF2P26368 XRCC5-204ENST00000429133 576 ntTSL 415.97■□□□□ 0.154e-7■□□□□ 9.5
U2AF2P26368 XRCC5-203ENST00000417391 605 ntTSL 311.47□□□□□ -0.574e-7■□□□□ 9.5
U2AF2P26368 XRCC5-202ENST00000392133 3761 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.744e-7■□□□□ 9.5
U2AF2P26368 XRCC5-208ENST00000476360 610 ntTSL 210.27□□□□□ -0.774e-7■□□□□ 9.5
U2AF2P26368 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.114e-7■□□□□ 9.5
U2AF2P26368 HNRNPD-209ENST00000513584 1240 ntTSL 226.8■■□□□ 1.881e-9■□□□□ 9.5
U2AF2P26368 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.12e-8■□□□□ 9.5
U2AF2P26368 DNAAF5-203ENST00000437419 585 ntTSL 522.94■■□□□ 1.262e-8■□□□□ 9.5
U2AF2P26368 DNAAF5-204ENST00000438961 579 ntTSL 422.75■■□□□ 1.232e-8■□□□□ 9.5
U2AF2P26368 DNAAF5-205ENST00000440747 2350 ntAPPRIS ALT2 TSL 221.04■□□□□ 0.962e-8■□□□□ 9.5
U2AF2P26368 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.672e-8■□□□□ 9.5
U2AF2P26368 KMT5B-212ENST00000466295 638 ntTSL 215.93■□□□□ 0.142e-8■□□□□ 9.5
U2AF2P26368 TTC32-202ENST00000402414 735 ntTSL 5 BASIC13.69□□□□□ -0.222e-8■□□□□ 9.5
U2AF2P26368 TTC32-201ENST00000333610 822 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.772e-8■□□□□ 9.5
U2AF2P26368 NRDC-207ENST00000475310 1025 ntTSL 23.99□□□□□ -1.772e-8■□□□□ 9.5
U2AF2P26368 TTC32-204ENST00000495698 710 ntTSL 22.29□□□□□ -2.042e-8■□□□□ 9.5
U2AF2P26368 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.11□□□□□ -2.592e-8■□□□□ 9.5
U2AF2P26368 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.812e-8■□□□□ 9.5
U2AF2P26368 SNAI1-201ENST00000244050 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.063e-9■□□□□ 9.5
U2AF2P26368 G3BP1-205ENST00000518726 869 ntTSL 1 (best)11.1□□□□□ -0.633e-9■□□□□ 9.5
U2AF2P26368 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC37.08■■■■□ 3.532e-7■□□□□ 9.5
U2AF2P26368 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.492e-7■□□□□ 9.5
U2AF2P26368 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.132e-7■□□□□ 9.5
U2AF2P26368 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.992e-7■□□□□ 9.5
U2AF2P26368 CDK18-206ENST00000462976 794 ntTSL 526.33■■□□□ 1.813e-6■□□□□ 9.5
U2AF2P26368 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.483e-6■□□□□ 9.5
U2AF2P26368 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC22.07■■□□□ 1.123e-6■□□□□ 9.5
U2AF2P26368 CDK18-204ENST00000443813 591 ntTSL 421.92■■□□□ 1.13e-6■□□□□ 9.5
U2AF2P26368 CDK18-209ENST00000478560 782 ntTSL 521.41■■□□□ 1.023e-6■□□□□ 9.5
Retrieved 100 of 36,523 protein–RNA pairs in 211.1 ms