Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC15.62■□□□□ 0.091e-11■□□□□ 9.6
U2AF2P26368 FGFR1-227ENST00000526570 5528 ntTSL 1 (best)14.4□□□□□ -0.11e-11■□□□□ 9.6
U2AF2P26368 FGFR1-208ENST00000397108 2870 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.121e-11■□□□□ 9.6
U2AF2P26368 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC13.94□□□□□ -0.181e-11■□□□□ 9.6
U2AF2P26368 FGFR1-209ENST00000397113 3680 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.431e-11■□□□□ 9.6
U2AF2P26368 FGFR1-219ENST00000475621 485 ntTSL 211.64□□□□□ -0.551e-11■□□□□ 9.6
U2AF2P26368 FGG-203ENST00000404648 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.834e-22■□□□□ 9.6
U2AF2P26368 FGG-204ENST00000405164 1539 ntTSL 5 BASIC8.49□□□□□ -1.054e-22■□□□□ 9.6
U2AF2P26368 FGG-209ENST00000465913 1573 ntTSL 27.76□□□□□ -1.174e-22■□□□□ 9.6
U2AF2P26368 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.98□□□□□ -1.294e-22■□□□□ 9.6
U2AF2P26368 FGG-212ENST00000492082 2031 ntTSL 56.2□□□□□ -1.424e-22■□□□□ 9.6
U2AF2P26368 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.03□□□□□ -1.444e-22■□□□□ 9.6
U2AF2P26368 RPRD1B-209ENST00000622494 469 ntTSL 35.57□□□□□ -1.521e-11■□□□□ 9.6
U2AF2P26368 FGG-206ENST00000443553 789 ntTSL 55□□□□□ -1.614e-22■□□□□ 9.6
U2AF2P26368 FGFR1-235ENST00000530701 276 ntTSL 1 (best)1.66□□□□□ -2.141e-11■□□□□ 9.6
U2AF2P26368 ARHGAP5-201ENST00000216743 3207 nt4.04□□□□□ -1.764e-10■□□□□ 9.6
U2AF2P26368 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.747e-6■□□□□ 9.6
U2AF2P26368 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.037e-6■□□□□ 9.6
U2AF2P26368 DNMT3A-204ENST00000380756 4477 ntTSL 1 (best)14.55□□□□□ -0.087e-6■□□□□ 9.6
U2AF2P26368 DNMT3A-201ENST00000264709 9501 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.277e-6■□□□□ 9.6
U2AF2P26368 DNMT3A-203ENST00000380746 3589 ntTSL 1 (best) BASIC12.59□□□□□ -0.397e-6■□□□□ 9.6
U2AF2P26368 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.84□□□□□ -1.951e-323■□□□□ 9.6
U2AF2P26368 TCF12-210ENST00000558908 553 ntTSL 420.65■□□□□ 0.95e-9■□□□□ 9.6
U2AF2P26368 AARS-203ENST00000565361 839 ntTSL 513.61□□□□□ -0.231e-6■□□□□ 9.6
U2AF2P26368 AARS-202ENST00000564359 590 ntTSL 311.62□□□□□ -0.551e-6■□□□□ 9.6
U2AF2P26368 PRPF8-204ENST00000572445 648 ntTSL 26.8□□□□□ -1.321e-7■□□□□ 9.6
U2AF2P26368 CUL5-205ENST00000532064 1109 ntTSL 520.03■□□□□ 0.81e-7■□□□□ 9.6
U2AF2P26368 CUL5-202ENST00000526303 751 ntTSL 214.18□□□□□ -0.141e-7■□□□□ 9.6
U2AF2P26368 EIF4G2-229ENST00000534272 591 ntTSL 33.39□□□□□ -1.877e-13■□□□□ 9.6
U2AF2P26368 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC8.8□□□□□ -11e-323■□□□□ 9.6
U2AF2P26368 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.44■■■□□ 2.463e-6■□□□□ 9.6
U2AF2P26368 DENR-204ENST00000539463 671 ntTSL 228.88■■■□□ 2.213e-6■□□□□ 9.6
U2AF2P26368 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.823e-6■□□□□ 9.6
U2AF2P26368 SOS1-205ENST00000461545 441 ntTSL 31.58□□□□□ -2.164e-7■□□□□ 9.6
U2AF2P26368 RNF126-207ENST00000605891 1671 ntTSL 535.34■■■■□ 3.251e-8■□□□□ 9.6
U2AF2P26368 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.81e-8■□□□□ 9.6
U2AF2P26368 UBFD1-206ENST00000566669 577 ntTSL 230.52■■■□□ 2.482e-9■□□□□ 9.6
U2AF2P26368 RNF126-203ENST00000589762 963 ntTSL 230.29■■■□□ 2.441e-8■□□□□ 9.6
U2AF2P26368 ZNF598-206ENST00000564824 2147 ntTSL 529.58■■■□□ 2.331e-6■□□□□ 9.6
U2AF2P26368 ZDHHC16-213ENST00000462924 1018 ntTSL 529.4■■■□□ 2.31e-6■□□□□ 9.6
U2AF2P26368 ZDHHC16-212ENST00000459777 834 ntTSL 329.37■■■□□ 2.291e-6■□□□□ 9.6
U2AF2P26368 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC29■■■□□ 2.231e-6■□□□□ 9.6
U2AF2P26368 PNKP-216ENST00000601816 682 ntTSL 328.97■■■□□ 2.234e-8■□□□□ 9.6
U2AF2P26368 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.76■■■□□ 2.21e-6■□□□□ 9.6
U2AF2P26368 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC28.67■■■□□ 2.181e-6■□□□□ 9.6
U2AF2P26368 C20orf204-201ENST00000358393 1466 ntTSL 228.66■■■□□ 2.182e-19■□□□□ 9.6
U2AF2P26368 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC27.93■■■□□ 2.061e-6■□□□□ 9.6
U2AF2P26368 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 21e-6■□□□□ 9.6
U2AF2P26368 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.981e-6■□□□□ 9.6
U2AF2P26368 CLMN-205ENST00000556416 1772 ntTSL 226.97■■□□□ 1.915e-18■□□□□ 9.6
U2AF2P26368 SMARCD1-203ENST00000547247 1584 ntTSL 1 (best)26.39■■□□□ 1.821e-6■□□□□ 9.6
U2AF2P26368 SPATA18-207ENST00000508915 569 ntTSL 426.15■■□□□ 1.784e-8■□□□□ 9.6
U2AF2P26368 SPATA18-210ENST00000514670 551 ntTSL 426.15■■□□□ 1.784e-8■□□□□ 9.6
U2AF2P26368 PNKP-205ENST00000595081 513 ntTSL 225.94■■□□□ 1.744e-8■□□□□ 9.6
U2AF2P26368 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.744e-8■□□□□ 9.6
U2AF2P26368 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.732e-9■□□□□ 9.6
U2AF2P26368 PNKP-220ENST00000627232 1530 ntTSL 525.6■■□□□ 1.694e-8■□□□□ 9.6
U2AF2P26368 C20orf204-204ENST00000463337 1412 ntAPPRIS ALT2 TSL 1 (best)25.6■■□□□ 1.692e-19■□□□□ 9.6
U2AF2P26368 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25.55■■□□□ 1.681e-6■□□□□ 9.6
U2AF2P26368 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.681e-6■□□□□ 9.6
U2AF2P26368 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.681e-6■□□□□ 9.6
U2AF2P26368 RNF126-205ENST00000591394 733 ntTSL 225.37■■□□□ 1.651e-8■□□□□ 9.6
U2AF2P26368 CASC3-207ENST00000581849 580 ntTSL 224.82■■□□□ 1.566e-7■□□□□ 9.6
U2AF2P26368 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24.63■■□□□ 1.531e-6■□□□□ 9.6
U2AF2P26368 NFATC3-209ENST00000561714 792 ntTSL 324.47■■□□□ 1.511e-6■□□□□ 9.6
U2AF2P26368 SPATA18-206ENST00000506829 620 ntTSL 324.33■■□□□ 1.494e-8■□□□□ 9.6
U2AF2P26368 LTB4R-205ENST00000556141 797 ntTSL 324.14■■□□□ 1.451e-6■□□□□ 9.6
U2AF2P26368 PNKP-203ENST00000593946 1723 ntTSL 1 (best)24.01■■□□□ 1.434e-8■□□□□ 9.6
U2AF2P26368 CASC3-203ENST00000418132 1986 ntTSL 1 (best)24.01■■□□□ 1.436e-7■□□□□ 9.6
U2AF2P26368 ZDHHC16-214ENST00000466895 948 ntTSL 523.83■■□□□ 1.411e-6■□□□□ 9.6
U2AF2P26368 UBAP1-205ENST00000626262 1753 ntTSL 223.66■■□□□ 1.384e-8■□□□□ 9.6
U2AF2P26368 UBE2Z-205ENST00000508468 573 ntTSL 323.48■■□□□ 1.352e-12■□□□□ 9.6
U2AF2P26368 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.42■■□□□ 1.344e-8■□□□□ 9.6
U2AF2P26368 NFATC3-210ENST00000562171 707 ntTSL 323.39■■□□□ 1.331e-6■□□□□ 9.6
U2AF2P26368 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.38■■□□□ 1.331e-6■□□□□ 9.6
U2AF2P26368 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.321e-6■□□□□ 9.6
U2AF2P26368 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.16■■□□□ 1.34e-8■□□□□ 9.6
U2AF2P26368 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC23.16■■□□□ 1.34e-8■□□□□ 9.6
U2AF2P26368 PNKP-212ENST00000599454 529 ntTSL 323.16■■□□□ 1.34e-8■□□□□ 9.6
U2AF2P26368 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.292e-12■□□□□ 9.6
U2AF2P26368 ZNF598-203ENST00000562988 3382 ntTSL 522.89■■□□□ 1.261e-6■□□□□ 9.6
U2AF2P26368 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.251e-6■□□□□ 9.6
U2AF2P26368 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.211e-6■□□□□ 9.6
U2AF2P26368 ZNF598-207ENST00000565396 4457 ntTSL 222.63■■□□□ 1.211e-6■□□□□ 9.6
U2AF2P26368 NFATC3-219ENST00000568466 737 ntTSL 222.6■■□□□ 1.211e-6■□□□□ 9.6
U2AF2P26368 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC22.32■■□□□ 1.164e-8■□□□□ 9.6
U2AF2P26368 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC22.25■■□□□ 1.154e-8■□□□□ 9.6
U2AF2P26368 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC22.25■■□□□ 1.152e-19■□□□□ 9.6
U2AF2P26368 SARS2-204ENST00000593754 565 ntTSL 421.98■■□□□ 1.114e-8■□□□□ 9.6
U2AF2P26368 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.14e-8■□□□□ 9.6
U2AF2P26368 KIAA0895L-211ENST00000568563 1977 ntTSL 521.56■■□□□ 1.041e-6■□□□□ 9.6
U2AF2P26368 TCF25-213ENST00000564957 459 ntTSL 321.49■■□□□ 1.039e-14■□□□□ 9.6
U2AF2P26368 TCF25-218ENST00000566283 515 ntTSL 221.49■■□□□ 1.039e-14■□□□□ 9.6
U2AF2P26368 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.23■□□□□ 0.994e-8■□□□□ 9.6
U2AF2P26368 RNF126-204ENST00000590885 1436 ntTSL 520.98■□□□□ 0.951e-8■□□□□ 9.6
U2AF2P26368 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.86■□□□□ 0.934e-8■□□□□ 9.6
U2AF2P26368 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.81■□□□□ 0.924e-8■□□□□ 9.6
U2AF2P26368 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.94e-25■□□□□ 9.6
U2AF2P26368 SARS2-208ENST00000598343 541 ntTSL 520.36■□□□□ 0.854e-8■□□□□ 9.6
U2AF2P26368 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.27■□□□□ 0.834e-8■□□□□ 9.6
Retrieved 100 of 36,523 protein–RNA pairs in 359.7 ms