RNA–Protein interactions for RNA: ENST00000598343.5

SARS2-208, Transcript of seryl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene SARS2, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SARS2-208ENST00000598343 NISCHQ9Y2I1 1504 aa42.84■■■■■ 4.45
SARS2-208ENST00000598343 CCDC180Q9P1Z9 1646 aa37.94■■■■□ 3.66
SARS2-208ENST00000598343 ABCC9O60706 1549 aa36.8■■■■□ 3.48
SARS2-208ENST00000598343 ZCCHC6Q5VYS8 1495 aaKnown RBP35.75■■■■□ 3.31
SARS2-208ENST00000598343 DCAF8L2P0C7V8 631 aa35.7■■■■□ 3.31
SARS2-208ENST00000598343 NACADO15069 1562 aa35.59■■■■□ 3.29
SARS2-208ENST00000598343 RB1CC1Q8TDY2 1594 aa35.56■■■■□ 3.28
SARS2-208ENST00000598343 MYO15BQ96JP2 1530 aa35.47■■■■□ 3.27
SARS2-208ENST00000598343 DCAF1Q9Y4B6 1507 aa35.46■■■■□ 3.27
SARS2-208ENST00000598343 UNC13AQ9UPW8 1703 aa34.71■■■■□ 3.15
SARS2-208ENST00000598343 SCRIBQ14160 1630 aa34.66■■■■□ 3.14
SARS2-208ENST00000598343 BICRAQ9NZM4 1560 aa34.44■■■■□ 3.1
SARS2-208ENST00000598343 PABPN1Q86U42 306 aaKnown RBP eCLIP34.43■■■■□ 3.13e-6■■■■□ 23.3
SARS2-208ENST00000598343 SHROOM4Q9ULL8 1493 aa34.13■■■■□ 3.05
SARS2-208ENST00000598343 EIF4G1Q04637 1599 aaKnown RBP33.51■■■□□ 2.96
SARS2-208ENST00000598343 DNAJC5BQ9UF47 199 aa33.41■■■□□ 2.94
SARS2-208ENST00000598343 CECR2Q9BXF3 1484 aa33.32■■■□□ 2.92
SARS2-208ENST00000598343 CC2D2AQ9P2K1 1620 aa33.29■■■□□ 2.92
SARS2-208ENST00000598343 BAZ1AQ9NRL2 1556 aaPredicted RBP33.2■■■□□ 2.91
SARS2-208ENST00000598343 SMARCA4P51532 1647 aa33.17■■■□□ 2.9
SARS2-208ENST00000598343 MROH2BQ7Z745 1585 aa33.02■■■□□ 2.88
SARS2-208ENST00000598343 SMARCA2P51531 1590 aa32.9■■■□□ 2.86
SARS2-208ENST00000598343 ATAD2BQ9ULI0 1458 aa32.89■■■□□ 2.86
SARS2-208ENST00000598343 PEG3Q9GZU2 1588 aa32.83■■■□□ 2.85
SARS2-208ENST00000598343 NCAPD3P42695 1498 aa32.82■■■□□ 2.84
SARS2-208ENST00000598343 RSF1Q96T23 1441 aaPredicted RBP32.77■■■□□ 2.84
SARS2-208ENST00000598343 HMGXB3Q12766 1538 aa32.71■■■□□ 2.83
SARS2-208ENST00000598343 WIZO95785 1651 aa32.69■■■□□ 2.82
SARS2-208ENST00000598343 BAZ1BQ9UIG0 1483 aaKnown RBP32.67■■■□□ 2.82
SARS2-208ENST00000598343 TOP2AP11388 1531 aaKnown RBP32.36■■■□□ 2.77
SARS2-208ENST00000598343 SUPT5HO00267 1087 aaKnown RBP32.24■■■□□ 2.75
SARS2-208ENST00000598343 CCDC88BA6NC98 1476 aa31.98■■■□□ 2.71
SARS2-208ENST00000598343 NESP48681 1621 aa31.93■■■□□ 2.7
SARS2-208ENST00000598343 LAMC3Q9Y6N6 1575 aa31.93■■■□□ 2.7
SARS2-208ENST00000598343 CADPSQ9ULU8 1353 aa31.9■■■□□ 2.7
SARS2-208ENST00000598343 CFTRP13569 1480 aa31.78■■■□□ 2.68
SARS2-208ENST00000598343 ERCC6Q03468 1493 aa31.72■■■□□ 2.67
SARS2-208ENST00000598343 PDS5BQ9NTI5 1447 aa31.7■■■□□ 2.67
SARS2-208ENST00000598343 KIF21AQ7Z4S6 1674 aa31.57■■■□□ 2.64
SARS2-208ENST00000598343 PRDM2Q13029 1718 aa31.56■■■□□ 2.64
SARS2-208ENST00000598343 FANCD2Q9BXW9 1451 aa31.53■■■□□ 2.64
SARS2-208ENST00000598343 CEP164Q9UPV0 1460 aa31.48■■■□□ 2.63
SARS2-208ENST00000598343 THOC2Q8NI27 1593 aaKnown RBP31.38■■■□□ 2.61
SARS2-208ENST00000598343 MRC2Q9UBG0 1479 aa31.35■■■□□ 2.61
SARS2-208ENST00000598343 CUX2O14529 1486 aa31.23■■■□□ 2.59
SARS2-208ENST00000598343 WDR62O43379 1518 aa31.23■■■□□ 2.59
SARS2-208ENST00000598343 URB2Q14146 1524 aaKnown RBP31.19■■■□□ 2.58
SARS2-208ENST00000598343 ABCC8Q09428 1581 aa31.1■■■□□ 2.57
SARS2-208ENST00000598343 DNMBPQ6XZF7 1577 aa31.07■■■□□ 2.56
SARS2-208ENST00000598343 TOPBP1Q92547 1522 aa31.07■■■□□ 2.56
SARS2-208ENST00000598343 CUX1P39880 1505 aa30.95■■■□□ 2.55
SARS2-208ENST00000598343 WRNQ14191 1432 aaPredicted RBP eCLIP30.9■■■□□ 2.54
SARS2-208ENST00000598343 POLA1P09884 1462 aaPredicted RBP30.82■■■□□ 2.53
SARS2-208ENST00000598343 FGD5Q6ZNL6 1462 aa30.81■■■□□ 2.52
SARS2-208ENST00000598343 IFT140Q96RY7 1462 aa30.8■■■□□ 2.52
SARS2-208ENST00000598343 TOP2BQ02880 1626 aa30.8■■■□□ 2.52
SARS2-208ENST00000598343 SYNJ1O43426 1573 aa30.79■■■□□ 2.52
SARS2-208ENST00000598343 BIVM-ERCC5R4GMW8 1640 aa30.79■■■□□ 2.52
SARS2-208ENST00000598343 SOGA1O94964 1423 aa30.73■■■□□ 2.51
SARS2-208ENST00000598343 TARBP1Q13395 1621 aaKnown RBP30.69■■■□□ 2.5
SARS2-208ENST00000598343 RAD54L2Q9Y4B4 1467 aa30.69■■■□□ 2.5
SARS2-208ENST00000598343 ZNF608Q9ULD9 1512 aaPredicted RBP30.61■■■□□ 2.49
SARS2-208ENST00000598343 WDR97A6NE52 1622 aa30.53■■■□□ 2.48
SARS2-208ENST00000598343 EIF4G3O43432 1585 aaKnown RBP30.53■■■□□ 2.48
SARS2-208ENST00000598343 ABCA10Q8WWZ4 1543 aa30.52■■■□□ 2.48
SARS2-208ENST00000598343 TDRD9Q8NDG6 1382 aaKnown RBP30.5■■■□□ 2.47
SARS2-208ENST00000598343 AQRO60306 1485 aaKnown RBP eCLIP30.49■■■□□ 2.475e-9■□□□□ 10.4
SARS2-208ENST00000598343 TRIM41Q8WV44 630 aa30.43■■■□□ 2.46
SARS2-208ENST00000598343 ABCA5Q8WWZ7 1642 aa30.37■■■□□ 2.45
SARS2-208ENST00000598343 GAPVD1Q14C86 1478 aa30.37■■■□□ 2.45
SARS2-208ENST00000598343 GRIN2BQ13224 1484 aa30.32■■■□□ 2.44
SARS2-208ENST00000598343 PBRM1Q86U86 1689 aa30.28■■■□□ 2.44
SARS2-208ENST00000598343 CHIC1Q5VXU3 224 aa30.26■■■□□ 2.43
SARS2-208ENST00000598343 KIF27Q86VH2 1401 aa30.23■■■□□ 2.43
SARS2-208ENST00000598343 SNAPC4Q5SXM2 1469 aa30.23■■■□□ 2.43
SARS2-208ENST00000598343 MAGI1Q96QZ7 1491 aaPredicted RBP30.2■■■□□ 2.43
SARS2-208ENST00000598343 ERICH3Q5RHP9 1530 aa30.17■■■□□ 2.42
SARS2-208ENST00000598343 FBLN2P98095 1184 aa30.09■■■□□ 2.41
SARS2-208ENST00000598343 SYNJ2O15056 1496 aa30.08■■■□□ 2.41
SARS2-208ENST00000598343 CHD1O14646 1710 aa30.06■■■□□ 2.4
SARS2-208ENST00000598343 CHMP7Q8WUX9 453 aaPredicted RBP30.06■■■□□ 2.4
SARS2-208ENST00000598343 ADAMTS12P58397 1594 aa30.06■■■□□ 2.4
SARS2-208ENST00000598343 IGF1RP08069 1367 aa30.04■■■□□ 2.4
SARS2-208ENST00000598343 RUSC2Q8N2Y8 1516 aa30.04■■■□□ 2.4
SARS2-208ENST00000598343 FHAD1B1AJZ9 1412 aa30.03■■■□□ 2.4
SARS2-208ENST00000598343 OSCARQ8IYS5 282 aa30.01■■■□□ 2.39
SARS2-208ENST00000598343 CUL7Q14999 1698 aa29.98■■■□□ 2.39
SARS2-208ENST00000598343 GRIN2AQ12879 1464 aa29.93■■■□□ 2.38
SARS2-208ENST00000598343 CARMIL1Q5VZK9 1371 aa29.9■■■□□ 2.38
SARS2-208ENST00000598343 EEA1Q15075 1411 aa29.89■■■□□ 2.38
SARS2-208ENST00000598343 DNAJC5Q9H3Z4 198 aa29.85■■■□□ 2.37
SARS2-208ENST00000598343 CSRNP3Q8WYN3 585 aa29.8■■■□□ 2.36
SARS2-208ENST00000598343 FAM9AQ8IZU1 332 aaPredicted RBP29.79■■■□□ 2.36
SARS2-208ENST00000598343 RAPGEF2Q9Y4G8 1499 aa29.76■■■□□ 2.35
SARS2-208ENST00000598343 NUP160Q12769 1436 aa29.76■■■□□ 2.35
SARS2-208ENST00000598343 CEP170Q5SW79 1584 aa29.76■■■□□ 2.35
SARS2-208ENST00000598343 CLASP1Q7Z460 1538 aa29.74■■■□□ 2.35
SARS2-208ENST00000598343 PRXQ9BXM0 1461 aa29.72■■■□□ 2.35
SARS2-208ENST00000598343 KIAA0586Q9BVV6 1533 aa29.58■■■□□ 2.33
SARS2-208ENST00000598343 KIF21BO75037 1637 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms