Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TPM3P06753 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.03■□□□□ -0
TPM3P06753 MIR1307-201ENST00000408840 149 ntBASIC15.03■□□□□ -0
TPM3P06753 COX5BP8-201ENST00000416911 349 ntBASIC15.03■□□□□ -0
TPM3P06753 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TPM3P06753 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC15.03■□□□□ -0
TPM3P06753 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.03■□□□□ -0
TPM3P06753 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.03■□□□□ -0
TPM3P06753 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC15.03■□□□□ -0
TPM3P06753 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.03■□□□□ -0
TPM3P06753 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.03■□□□□ -0
TPM3P06753 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TPM3P06753 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.03■□□□□ -0
TPM3P06753 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.03■□□□□ -0
TPM3P06753 LINC00642-201ENST00000419459 2026 ntTSL 2 BASIC15.03■□□□□ -0
TPM3P06753 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC15.03■□□□□ -0
TPM3P06753 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TPM3P06753 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TPM3P06753 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC15.03■□□□□ -0
TPM3P06753 TGOLN2-206ENST00000444342 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TPM3P06753 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC15.03■□□□□ -0
TPM3P06753 LPXN-203ENST00000528954 1879 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TPM3P06753 NTM-206ENST00000427481 2583 ntTSL 5 BASIC15.03■□□□□ -0
TPM3P06753 NLRP7-202ENST00000340844 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TPM3P06753 PBOV1-201ENST00000527246 2506 ntAPPRIS P1 BASIC15.03■□□□□ -0
TPM3P06753 PITRM1-201ENST00000224949 3450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TPM3P06753 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC15.02■□□□□ -0
TPM3P06753 ABCF2-201ENST00000222388 2185 ntTSL 5 BASIC15.02■□□□□ -0
TPM3P06753 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
TPM3P06753 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC15.02■□□□□ -0
TPM3P06753 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TPM3P06753 RHBDL2-201ENST00000289248 2129 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TPM3P06753 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TPM3P06753 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TPM3P06753 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC15.02■□□□□ -0
TPM3P06753 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC15.02■□□□□ -0
TPM3P06753 ACADL-201ENST00000233710 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TPM3P06753 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TPM3P06753 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC15.02■□□□□ -0
TPM3P06753 SHROOM2P1-201ENST00000434773 2384 ntBASIC15.02■□□□□ -0
TPM3P06753 PABPC1P2-201ENST00000471997 1805 ntBASIC15.02■□□□□ -0
TPM3P06753 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC15.02■□□□□ -0
TPM3P06753 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
TPM3P06753 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC15.02■□□□□ -0
TPM3P06753 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.02■□□□□ -0
TPM3P06753 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TPM3P06753 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.02■□□□□ -0
TPM3P06753 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.02■□□□□ -0
TPM3P06753 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.02■□□□□ -0
TPM3P06753 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.02■□□□□ -0
TPM3P06753 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.02■□□□□ -0
TPM3P06753 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.02■□□□□ -0
TPM3P06753 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.02■□□□□ -0
TPM3P06753 AC092171.5-201ENST00000608012 942 ntBASIC15.02■□□□□ -0
TPM3P06753 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TPM3P06753 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TPM3P06753 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TPM3P06753 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TPM3P06753 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TPM3P06753 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TPM3P06753 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TPM3P06753 IGHG2-202ENST00000641095 2594 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
TPM3P06753 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TPM3P06753 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TPM3P06753 DHX30-207ENST00000457607 3748 ntTSL 5 BASIC15.02□□□□□ -0.01
TPM3P06753 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TPM3P06753 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TPM3P06753 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TPM3P06753 PKM-222ENST00000568883 1863 ntTSL 5 BASIC15.01□□□□□ -0.01
TPM3P06753 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TPM3P06753 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TPM3P06753 CPSF6-201ENST00000266679 2229 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TPM3P06753 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
TPM3P06753 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TPM3P06753 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TPM3P06753 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
TPM3P06753 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TPM3P06753 PCDHGB8P-202ENST00000507007 2873 ntBASIC15.01□□□□□ -0.01
TPM3P06753 CELF2-AS1-201ENST00000379256 2468 ntTSL 2 BASIC15.01□□□□□ -0.01
TPM3P06753 AL513497.1-201ENST00000624273 2083 ntBASIC15.01□□□□□ -0.01
TPM3P06753 AC139491.6-202ENST00000637171 2077 ntBASIC15.01□□□□□ -0.01
TPM3P06753 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC15.01□□□□□ -0.01
TPM3P06753 SLC39A14-204ENST00000381237 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TPM3P06753 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC15.01□□□□□ -0.01
TPM3P06753 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TPM3P06753 CRHR1-206ENST00000398285 2399 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TPM3P06753 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TPM3P06753 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TPM3P06753 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TPM3P06753 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.01□□□□□ -0.01
TPM3P06753 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TPM3P06753 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TPM3P06753 LINC00265-2P-201ENST00000413372 782 ntBASIC15.01□□□□□ -0.01
TPM3P06753 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.01□□□□□ -0.01
TPM3P06753 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.01□□□□□ -0.01
TPM3P06753 AL365203.1-201ENST00000450890 1048 ntTSL 3 BASIC15.01□□□□□ -0.01
TPM3P06753 RPSAP36-202ENST00000494591 1261 ntBASIC15.01□□□□□ -0.01
TPM3P06753 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.01□□□□□ -0.01
TPM3P06753 AC104989.1-201ENST00000519711 778 ntBASIC15.01□□□□□ -0.01
TPM3P06753 AP005018.1-201ENST00000525475 301 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms