RNA–Protein interactions for RNA: ENST00000393283.5

RGPD5-203, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 1 (best) BASIC

Gene RGPD5, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-203ENST00000393283 NISCHQ9Y2I1 1504 aa24.11■■□□□ 1.45
RGPD5-203ENST00000393283 SHROOM4Q9ULL8 1493 aa22.04■■□□□ 1.12
RGPD5-203ENST00000393283 SUPT5HO00267 1087 aaKnown RBP21.86■■□□□ 1.09
RGPD5-203ENST00000393283 DCAF8L2P0C7V8 631 aa21.38■■□□□ 1.01
RGPD5-203ENST00000393283 PCGF6Q9BYE7 350 aa21.31■■□□□ 1
RGPD5-203ENST00000393283 PPARGC1BQ86YN6 1023 aaKnown RBP21.25■□□□□ 0.99
RGPD5-203ENST00000393283 HRCP23327 699 aa21.24■□□□□ 0.99
RGPD5-203ENST00000393283 CHIC1Q5VXU3 224 aa20.97■□□□□ 0.95
RGPD5-203ENST00000393283 MYO15BQ96JP2 1530 aa20.96■□□□□ 0.95
RGPD5-203ENST00000393283 LOC105371045A0A1W2PR82 267 aa20.8■□□□□ 0.92
RGPD5-203ENST00000393283 EHMT2Q96KQ7 1210 aa20.62■□□□□ 0.89
RGPD5-203ENST00000393283 FAM9AQ8IZU1 332 aaPredicted RBP20.38■□□□□ 0.85
RGPD5-203ENST00000393283 ZCCHC6Q5VYS8 1495 aaKnown RBP20.36■□□□□ 0.85
RGPD5-203ENST00000393283 TRIM26Q12899 539 aaPredicted RBP20.32■□□□□ 0.84
RGPD5-203ENST00000393283 SCAF1Q9H7N4 1312 aaKnown RBP20.12■□□□□ 0.81
RGPD5-203ENST00000393283 DCAF1Q9Y4B6 1507 aa20.11■□□□□ 0.81
RGPD5-203ENST00000393283 TRIM41Q8WV44 630 aa20.01■□□□□ 0.79
RGPD5-203ENST00000393283 TTBK1Q5TCY1 1321 aaPredicted RBP19.97■□□□□ 0.79
RGPD5-203ENST00000393283 ZEB1P37275 1124 aaPredicted RBP19.93■□□□□ 0.78
RGPD5-203ENST00000393283 PELP1Q8IZL8 1130 aaKnown RBP19.93■□□□□ 0.78
RGPD5-203ENST00000393283 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.84■□□□□ 0.77
RGPD5-203ENST00000393283 CCDC180Q9P1Z9 1646 aa19.79■□□□□ 0.76
RGPD5-203ENST00000393283 CCER1Q8TC90 406 aaPredicted RBP19.74■□□□□ 0.75
RGPD5-203ENST00000393283 NEUROD1Q13562 356 aa19.72■□□□□ 0.75
RGPD5-203ENST00000393283 GTF3C3Q9Y5Q9 886 aa19.64■□□□□ 0.74
RGPD5-203ENST00000393283 ACIN1Q9UKV3 1341 aaKnown RBP19.61■□□□□ 0.73
RGPD5-203ENST00000393283 YTHDC1Q96MU7 727 aaKnown RBP19.59■□□□□ 0.73
RGPD5-203ENST00000393283 DIEXFQ68CQ4 756 aaKnown RBP19.53■□□□□ 0.72
RGPD5-203ENST00000393283 RSF1Q96T23 1441 aaPredicted RBP19.47■□□□□ 0.71
RGPD5-203ENST00000393283 CENPBP07199 599 aaPredicted RBP19.45■□□□□ 0.7
RGPD5-203ENST00000393283 SCRIBQ14160 1630 aa19.45■□□□□ 0.7
RGPD5-203ENST00000393283 RB1CC1Q8TDY2 1594 aa19.32■□□□□ 0.68
RGPD5-203ENST00000393283 RANGAP1P46060 587 aaPredicted RBP19.25■□□□□ 0.67
RGPD5-203ENST00000393283 ABCC9O60706 1549 aa19.23■□□□□ 0.67
RGPD5-203ENST00000393283 UBTFP17480 764 aaKnown RBP19.19■□□□□ 0.66
RGPD5-203ENST00000393283 CECR2Q9BXF3 1484 aa19.18■□□□□ 0.66
RGPD5-203ENST00000393283 HNRNPUL2Q1KMD3 747 aaKnown RBP19.15■□□□□ 0.66
RGPD5-203ENST00000393283 ZNF316A6NFI3 1004 aaPredicted RBP19.08■□□□□ 0.65
RGPD5-203ENST00000393283 MIER1Q8N108 512 aa19.08■□□□□ 0.65
RGPD5-203ENST00000393283 MROH2BQ7Z745 1585 aa18.99■□□□□ 0.63
RGPD5-203ENST00000393283 MYT1Q01538 1121 aa18.96■□□□□ 0.63
RGPD5-203ENST00000393283 WIZO95785 1651 aa18.86■□□□□ 0.61
RGPD5-203ENST00000393283 ABCC8Q09428 1581 aa18.84■□□□□ 0.61
RGPD5-203ENST00000393283 CEP162Q5TB80 1403 aa18.84■□□□□ 0.61
RGPD5-203ENST00000393283 SOGA1O94964 1423 aa18.83■□□□□ 0.61
RGPD5-203ENST00000393283 CCDC88BA6NC98 1476 aa18.82■□□□□ 0.6
RGPD5-203ENST00000393283 CSRNP3Q8WYN3 585 aa18.8■□□□□ 0.6
RGPD5-203ENST00000393283 APLP2Q06481 763 aa18.78■□□□□ 0.6
RGPD5-203ENST00000393283 PABPN1Q86U42 306 aaKnown RBP eCLIP18.77■□□□□ 0.59
RGPD5-203ENST00000393283 RUSC2Q8N2Y8 1516 aa18.72■□□□□ 0.59
RGPD5-203ENST00000393283 BCANQ96GW7 911 aa18.69■□□□□ 0.58
RGPD5-203ENST00000393283 ITGAEP38570 1179 aa18.66■□□□□ 0.58
RGPD5-203ENST00000393283 SUPT16HQ9Y5B9 1047 aaKnown RBP18.59■□□□□ 0.57
RGPD5-203ENST00000393283 TNIKQ9UKE5 1360 aa18.58■□□□□ 0.56
RGPD5-203ENST00000393283 WRNQ14191 1432 aaPredicted RBP eCLIP18.56■□□□□ 0.56
RGPD5-203ENST00000393283 KCNH8Q96L42 1107 aa18.51■□□□□ 0.55
RGPD5-203ENST00000393283 NACADO15069 1562 aa18.45■□□□□ 0.54
RGPD5-203ENST00000393283 TSHZ2Q9NRE2 1034 aa18.44■□□□□ 0.54
RGPD5-203ENST00000393283 BAZ1AQ9NRL2 1556 aaPredicted RBP18.44■□□□□ 0.54
RGPD5-203ENST00000393283 CLIP1P30622 1438 aa18.43■□□□□ 0.54
RGPD5-203ENST00000393283 GOLGA3Q08378 1498 aa18.4■□□□□ 0.54
RGPD5-203ENST00000393283 FKBP8Q14318 412 aa18.35■□□□□ 0.53
RGPD5-203ENST00000393283 HIRIP3Q9BW71 556 aaPredicted RBP18.35■□□□□ 0.53
RGPD5-203ENST00000393283 ATP1B4Q9UN42 357 aaPredicted RBP18.33■□□□□ 0.52
RGPD5-203ENST00000393283 ANP32EQ9BTT0 268 aa18.33■□□□□ 0.52
RGPD5-203ENST00000393283 KANK4Q5T7N3 995 aaPredicted RBP18.32■□□□□ 0.52
RGPD5-203ENST00000393283 TOP2AP11388 1531 aaKnown RBP18.31■□□□□ 0.52
RGPD5-203ENST00000393283 SMARCA2P51531 1590 aa18.3■□□□□ 0.52
RGPD5-203ENST00000393283 EIF4G1Q04637 1599 aaKnown RBP18.3■□□□□ 0.52
RGPD5-203ENST00000393283 DDX10Q13206 875 aaKnown RBP18.29■□□□□ 0.52
RGPD5-203ENST00000393283 TRIM52Q96A61 297 aa18.26■□□□□ 0.51
RGPD5-203ENST00000393283 EEA1Q15075 1411 aa18.24■□□□□ 0.51
RGPD5-203ENST00000393283 RAPGEF2Q9Y4G8 1499 aa18.24■□□□□ 0.51
RGPD5-203ENST00000393283 BCL11AQ9H165 835 aa18.23■□□□□ 0.51
RGPD5-203ENST00000393283 DHX57Q6P158 1386 aaKnown RBP18.23■□□□□ 0.51
RGPD5-203ENST00000393283 VPS8Q8N3P4 1428 aa18.21■□□□□ 0.51
RGPD5-203ENST00000393283 SMARCA4P51532 1647 aa18.21■□□□□ 0.51
RGPD5-203ENST00000393283 CEP164Q9UPV0 1460 aa18.21■□□□□ 0.51
RGPD5-203ENST00000393283 NEFLP07196 543 aa18.17■□□□□ 0.5
RGPD5-203ENST00000393283 SIN3AQ96ST3 1273 aa18.15■□□□□ 0.5
RGPD5-203ENST00000393283 FAM50AQ14320 339 aaKnown RBP18.14■□□□□ 0.49
RGPD5-203ENST00000393283 P3H3Q8IVL6 736 aa18.14■□□□□ 0.49
RGPD5-203ENST00000393283 IRX6P78412 446 aaPredicted RBP18.13■□□□□ 0.49
RGPD5-203ENST00000393283 CLSPNQ9HAW4 1339 aa18.1■□□□□ 0.49
RGPD5-203ENST00000393283 SYNJ1O43426 1573 aa18.09■□□□□ 0.49
RGPD5-203ENST00000393283 RBM19Q9Y4C8 960 aaKnown RBP18.08■□□□□ 0.49
RGPD5-203ENST00000393283 KIF21BO75037 1637 aa18.02■□□□□ 0.48
RGPD5-203ENST00000393283 ERICH6Q7L0X2 663 aa17.97■□□□□ 0.47
RGPD5-203ENST00000393283 CNGB1Q14028 1251 aaPredicted RBP17.95■□□□□ 0.46
RGPD5-203ENST00000393283 ANP32CO43423 234 aa17.95■□□□□ 0.46
RGPD5-203ENST00000393283 RAB3GAP2Q9H2M9 1393 aa17.93■□□□□ 0.46
RGPD5-203ENST00000393283 BAZ1BQ9UIG0 1483 aaKnown RBP17.93■□□□□ 0.46
RGPD5-203ENST00000393283 CCNB3Q8WWL7 1395 aa17.92■□□□□ 0.46
RGPD5-203ENST00000393283 ARAP1Q96P48 1450 aa17.89■□□□□ 0.45
RGPD5-203ENST00000393283 HNRNPUQ00839 825 aaKnown RBP eCLIP17.88■□□□□ 0.45
RGPD5-203ENST00000393283 MSH5O43196 834 aa17.87■□□□□ 0.45
RGPD5-203ENST00000393283 ATAD2BQ9ULI0 1458 aa17.84■□□□□ 0.45
RGPD5-203ENST00000393283 SENP3-EIF4A1A0A087X0R7 540 aa17.82■□□□□ 0.44
RGPD5-203ENST00000393283 WDR97A6NE52 1622 aa17.79■□□□□ 0.44
RGPD5-203ENST00000393283 PPP1R15AO75807 674 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms