RNA–Protein interactions for RNA: ENST00000434773.1

SHROOM2P1-201, Transcript of shroom family member 2 pseudogene 1, humanhuman

BASIC

Gene SHROOM2P1, Length 2,384 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM2P1-201ENST00000434773 NISCHQ9Y2I1 1504 aa27.51■■□□□ 1.99
SHROOM2P1-201ENST00000434773 CCDC180Q9P1Z9 1646 aa23.96■■□□□ 1.43
SHROOM2P1-201ENST00000434773 ZCCHC6Q5VYS8 1495 aaKnown RBP23.13■■□□□ 1.29
SHROOM2P1-201ENST00000434773 ABCC9O60706 1549 aa22.79■■□□□ 1.24
SHROOM2P1-201ENST00000434773 DCAF8L2P0C7V8 631 aa22.72■■□□□ 1.23
SHROOM2P1-201ENST00000434773 DCAF1Q9Y4B6 1507 aa22.7■■□□□ 1.22
SHROOM2P1-201ENST00000434773 SHROOM4Q9ULL8 1493 aa22.54■■□□□ 1.2
SHROOM2P1-201ENST00000434773 MYO15BQ96JP2 1530 aa22.41■■□□□ 1.18
SHROOM2P1-201ENST00000434773 NACADO15069 1562 aa22.29■■□□□ 1.16
SHROOM2P1-201ENST00000434773 RB1CC1Q8TDY2 1594 aa22.1■■□□□ 1.13
SHROOM2P1-201ENST00000434773 SCRIBQ14160 1630 aa22.1■■□□□ 1.13
SHROOM2P1-201ENST00000434773 UNC13AQ9UPW8 1703 aa21.78■■□□□ 1.08
SHROOM2P1-201ENST00000434773 SUPT5HO00267 1087 aaKnown RBP21.72■■□□□ 1.07
SHROOM2P1-201ENST00000434773 BICRAQ9NZM4 1560 aa21.48■■□□□ 1.03
SHROOM2P1-201ENST00000434773 CECR2Q9BXF3 1484 aa21.41■■□□□ 1.02
SHROOM2P1-201ENST00000434773 PABPN1Q86U42 306 aaKnown RBP eCLIP21.39■■□□□ 1.01
SHROOM2P1-201ENST00000434773 RSF1Q96T23 1441 aaPredicted RBP21.36■■□□□ 1.01
SHROOM2P1-201ENST00000434773 MROH2BQ7Z745 1585 aa21.29■■□□□ 1
SHROOM2P1-201ENST00000434773 BAZ1AQ9NRL2 1556 aaPredicted RBP21.23■□□□□ 0.99
SHROOM2P1-201ENST00000434773 HRCP23327 699 aa21.22■□□□□ 0.99
SHROOM2P1-201ENST00000434773 SMARCA4P51532 1647 aa21.16■□□□□ 0.98
SHROOM2P1-201ENST00000434773 WIZO95785 1651 aa21.13■□□□□ 0.97
SHROOM2P1-201ENST00000434773 PELP1Q8IZL8 1130 aaKnown RBP21.12■□□□□ 0.97
SHROOM2P1-201ENST00000434773 TOP2AP11388 1531 aaKnown RBP20.87■□□□□ 0.93
SHROOM2P1-201ENST00000434773 PEG3Q9GZU2 1588 aa20.86■□□□□ 0.93
SHROOM2P1-201ENST00000434773 CHIC1Q5VXU3 224 aa20.85■□□□□ 0.93
SHROOM2P1-201ENST00000434773 EIF4G1Q04637 1599 aaKnown RBP20.83■□□□□ 0.93
SHROOM2P1-201ENST00000434773 ATAD2BQ9ULI0 1458 aa20.78■□□□□ 0.92
SHROOM2P1-201ENST00000434773 SMARCA2P51531 1590 aa20.76■□□□□ 0.91
SHROOM2P1-201ENST00000434773 BAZ1BQ9UIG0 1483 aaKnown RBP20.67■□□□□ 0.9
SHROOM2P1-201ENST00000434773 CC2D2AQ9P2K1 1620 aa20.67■□□□□ 0.9
SHROOM2P1-201ENST00000434773 CCDC88BA6NC98 1476 aa20.66■□□□□ 0.9
SHROOM2P1-201ENST00000434773 PPARGC1BQ86YN6 1023 aaKnown RBP20.65■□□□□ 0.9
SHROOM2P1-201ENST00000434773 NCAPD3P42695 1498 aa20.57■□□□□ 0.88
SHROOM2P1-201ENST00000434773 HMGXB3Q12766 1538 aa20.56■□□□□ 0.88
SHROOM2P1-201ENST00000434773 DNAJC5BQ9UF47 199 aa20.53■□□□□ 0.88
SHROOM2P1-201ENST00000434773 PCGF6Q9BYE7 350 aa20.46■□□□□ 0.87
SHROOM2P1-201ENST00000434773 MYT1Q01538 1121 aa20.45■□□□□ 0.86
SHROOM2P1-201ENST00000434773 TRIM41Q8WV44 630 aa20.36■□□□□ 0.85
SHROOM2P1-201ENST00000434773 ABCC8Q09428 1581 aa20.29■□□□□ 0.84
SHROOM2P1-201ENST00000434773 SCAF1Q9H7N4 1312 aaKnown RBP20.27■□□□□ 0.84
SHROOM2P1-201ENST00000434773 CFTRP13569 1480 aa20.14■□□□□ 0.81
SHROOM2P1-201ENST00000434773 WRNQ14191 1432 aaPredicted RBP eCLIP20.1■□□□□ 0.81
SHROOM2P1-201ENST00000434773 LOC105371045A0A1W2PR82 267 aa20.09■□□□□ 0.81
SHROOM2P1-201ENST00000434773 PRDM2Q13029 1718 aa20.07■□□□□ 0.8
SHROOM2P1-201ENST00000434773 SYNJ1O43426 1573 aa20.06■□□□□ 0.8
SHROOM2P1-201ENST00000434773 FAM9AQ8IZU1 332 aaPredicted RBP20.06■□□□□ 0.8
SHROOM2P1-201ENST00000434773 CADPSQ9ULU8 1353 aa20.05■□□□□ 0.8
SHROOM2P1-201ENST00000434773 TOP2BQ02880 1626 aa19.94■□□□□ 0.78
SHROOM2P1-201ENST00000434773 NESP48681 1621 aa19.93■□□□□ 0.78
SHROOM2P1-201ENST00000434773 BIVM-ERCC5R4GMW8 1640 aa19.92■□□□□ 0.78
SHROOM2P1-201ENST00000434773 CUX1P39880 1505 aa19.9■□□□□ 0.78
SHROOM2P1-201ENST00000434773 SOGA1O94964 1423 aa19.9■□□□□ 0.78
SHROOM2P1-201ENST00000434773 LAMC3Q9Y6N6 1575 aa19.88■□□□□ 0.77
SHROOM2P1-201ENST00000434773 FANCD2Q9BXW9 1451 aa19.86■□□□□ 0.77
SHROOM2P1-201ENST00000434773 RUSC2Q8N2Y8 1516 aa19.83■□□□□ 0.77
SHROOM2P1-201ENST00000434773 ZEB1P37275 1124 aaPredicted RBP19.81■□□□□ 0.76
SHROOM2P1-201ENST00000434773 EHMT2Q96KQ7 1210 aa19.8■□□□□ 0.76
SHROOM2P1-201ENST00000434773 EEA1Q15075 1411 aa19.79■□□□□ 0.76
SHROOM2P1-201ENST00000434773 TRIM26Q12899 539 aaPredicted RBP19.79■□□□□ 0.76
SHROOM2P1-201ENST00000434773 KIF21AQ7Z4S6 1674 aa19.73■□□□□ 0.75
SHROOM2P1-201ENST00000434773 CEP164Q9UPV0 1460 aa19.73■□□□□ 0.75
SHROOM2P1-201ENST00000434773 CSRNP3Q8WYN3 585 aa19.72■□□□□ 0.75
SHROOM2P1-201ENST00000434773 PDS5BQ9NTI5 1447 aa19.71■□□□□ 0.75
SHROOM2P1-201ENST00000434773 DNMBPQ6XZF7 1577 aa19.69■□□□□ 0.74
SHROOM2P1-201ENST00000434773 FGD5Q6ZNL6 1462 aa19.67■□□□□ 0.74
SHROOM2P1-201ENST00000434773 ACIN1Q9UKV3 1341 aaKnown RBP19.66■□□□□ 0.74
SHROOM2P1-201ENST00000434773 TOPBP1Q92547 1522 aa19.65■□□□□ 0.74
SHROOM2P1-201ENST00000434773 URB2Q14146 1524 aaKnown RBP19.63■□□□□ 0.73
SHROOM2P1-201ENST00000434773 ERCC6Q03468 1493 aa19.59■□□□□ 0.73
SHROOM2P1-201ENST00000434773 KIF21BO75037 1637 aa19.58■□□□□ 0.72
SHROOM2P1-201ENST00000434773 KIF27Q86VH2 1401 aa19.57■□□□□ 0.72
SHROOM2P1-201ENST00000434773 POLA1P09884 1462 aaPredicted RBP19.56■□□□□ 0.72
SHROOM2P1-201ENST00000434773 GOLGA3Q08378 1498 aa19.56■□□□□ 0.72
SHROOM2P1-201ENST00000434773 NEUROD1Q13562 356 aa19.55■□□□□ 0.72
SHROOM2P1-201ENST00000434773 CUX2O14529 1486 aa19.55■□□□□ 0.72
SHROOM2P1-201ENST00000434773 TNIKQ9UKE5 1360 aa19.53■□□□□ 0.72
SHROOM2P1-201ENST00000434773 RAD54L2Q9Y4B4 1467 aa19.52■□□□□ 0.72
SHROOM2P1-201ENST00000434773 THOC2Q8NI27 1593 aaKnown RBP19.51■□□□□ 0.71
SHROOM2P1-201ENST00000434773 UBTFP17480 764 aaKnown RBP19.49■□□□□ 0.71
SHROOM2P1-201ENST00000434773 RAPGEF2Q9Y4G8 1499 aa19.49■□□□□ 0.71
SHROOM2P1-201ENST00000434773 MRC2Q9UBG0 1479 aa19.48■□□□□ 0.71
SHROOM2P1-201ENST00000434773 ABCA10Q8WWZ4 1543 aa19.47■□□□□ 0.71
SHROOM2P1-201ENST00000434773 GTF3C3Q9Y5Q9 886 aa19.47■□□□□ 0.71
SHROOM2P1-201ENST00000434773 PRXQ9BXM0 1461 aa19.46■□□□□ 0.71
SHROOM2P1-201ENST00000434773 CEP162Q5TB80 1403 aa19.46■□□□□ 0.71
SHROOM2P1-201ENST00000434773 WDR97A6NE52 1622 aa19.44■□□□□ 0.7
SHROOM2P1-201ENST00000434773 ERICH3Q5RHP9 1530 aa19.43■□□□□ 0.7
SHROOM2P1-201ENST00000434773 IGF1RP08069 1367 aa19.4■□□□□ 0.7
SHROOM2P1-201ENST00000434773 WDR62O43379 1518 aa19.4■□□□□ 0.7
SHROOM2P1-201ENST00000434773 TARBP1Q13395 1621 aaKnown RBP19.36■□□□□ 0.69
SHROOM2P1-201ENST00000434773 ABCA5Q8WWZ7 1642 aa19.34■□□□□ 0.69
SHROOM2P1-201ENST00000434773 TTBK1Q5TCY1 1321 aaPredicted RBP19.33■□□□□ 0.69
SHROOM2P1-201ENST00000434773 CENPBP07199 599 aaPredicted RBP19.33■□□□□ 0.68
SHROOM2P1-201ENST00000434773 TDRD9Q8NDG6 1382 aaKnown RBP19.31■□□□□ 0.68
SHROOM2P1-201ENST00000434773 CARMIL1Q5VZK9 1371 aa19.3■□□□□ 0.68
SHROOM2P1-201ENST00000434773 GAPVD1Q14C86 1478 aa19.27■□□□□ 0.68
SHROOM2P1-201ENST00000434773 CLIP1P30622 1438 aa19.27■□□□□ 0.67
SHROOM2P1-201ENST00000434773 CUL7Q14999 1698 aa19.26■□□□□ 0.67
SHROOM2P1-201ENST00000434773 IFT140Q96RY7 1462 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms