Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-3Q9BYR4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC7.56□□□□□ -1.2
KRTAP4-3Q9BYR4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-3Q9BYR4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-3Q9BYR4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-3Q9BYR4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-3Q9BYR4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC7.56□□□□□ -1.2
KRTAP4-3Q9BYR4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-3Q9BYR4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-3Q9BYR4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC7.56□□□□□ -1.2
KRTAP4-3Q9BYR4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC7.56□□□□□ -1.2
KRTAP4-3Q9BYR4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-3Q9BYR4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC7.56□□□□□ -1.2
KRTAP4-3Q9BYR4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-3Q9BYR4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC7.56□□□□□ -1.2
KRTAP4-3Q9BYR4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-3Q9BYR4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-3Q9BYR4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-3Q9BYR4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-3Q9BYR4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC7.56□□□□□ -1.2
KRTAP4-3Q9BYR4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-3Q9BYR4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-3Q9BYR4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-3Q9BYR4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-3Q9BYR4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC7.56□□□□□ -1.2
KRTAP4-3Q9BYR4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 C9orf163-202ENST00000624034 2573 ntBASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 AC097381.1-201ENST00000429019 1296 ntBASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 AL499627.2-201ENST00000606283 725 ntBASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 MIR6821-201ENST00000617625 74 ntBASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 LINC01529-204ENST00000636474 1715 ntBASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-3Q9BYR4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 DUX4L4-201ENST00000566884 1269 ntBASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC7.54□□□□□ -1.2
KRTAP4-3Q9BYR4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
KRTAP4-3Q9BYR4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms