Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC01554Q52M75 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
LINC01554Q52M75 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01554Q52M75 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01554Q52M75 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01554Q52M75 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01554Q52M75 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01554Q52M75 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
LINC01554Q52M75 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01554Q52M75 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01554Q52M75 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01554Q52M75 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01554Q52M75 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01554Q52M75 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
LINC01554Q52M75 MIR3665-201ENST00000578708 105 ntBASIC11.07□□□□□ -0.64
LINC01554Q52M75 DUX4L28-201ENST00000623687 678 ntBASIC11.07□□□□□ -0.64
LINC01554Q52M75 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01554Q52M75 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
LINC01554Q52M75 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
LINC01554Q52M75 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01554Q52M75 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01554Q52M75 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01554Q52M75 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01554Q52M75 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC11.07□□□□□ -0.64
LINC01554Q52M75 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC01554Q52M75 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01554Q52M75 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
LINC01554Q52M75 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01554Q52M75 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC11.07□□□□□ -0.64
LINC01554Q52M75 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01554Q52M75 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01554Q52M75 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01554Q52M75 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
LINC01554Q52M75 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
LINC01554Q52M75 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01554Q52M75 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01554Q52M75 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01554Q52M75 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01554Q52M75 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01554Q52M75 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01554Q52M75 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01554Q52M75 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01554Q52M75 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01554Q52M75 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC01554Q52M75 CALM3-209ENST00000597743 577 ntTSL 4 BASIC11.06□□□□□ -0.64
LINC01554Q52M75 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01554Q52M75 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
LINC01554Q52M75 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
LINC01554Q52M75 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC01554Q52M75 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
LINC01554Q52M75 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01554Q52M75 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
LINC01554Q52M75 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01554Q52M75 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01554Q52M75 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01554Q52M75 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01554Q52M75 DUSP8P4-201ENST00000399538 1761 ntBASIC11.05□□□□□ -0.64
LINC01554Q52M75 FOXO3B-201ENST00000395675 1928 ntBASIC11.05□□□□□ -0.64
LINC01554Q52M75 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01554Q52M75 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01554Q52M75 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
LINC01554Q52M75 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
LINC01554Q52M75 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01554Q52M75 AC080038.3-201ENST00000623346 1952 ntBASIC11.05□□□□□ -0.64
LINC01554Q52M75 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01554Q52M75 CROCCP1-201ENST00000426910 5675 ntBASIC11.05□□□□□ -0.64
LINC01554Q52M75 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01554Q52M75 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01554Q52M75 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC11.05□□□□□ -0.64
LINC01554Q52M75 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01554Q52M75 HR-201ENST00000312841 5351 ntTSL 5 BASIC11.05□□□□□ -0.64
LINC01554Q52M75 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01554Q52M75 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01554Q52M75 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01554Q52M75 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01554Q52M75 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01554Q52M75 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC11.05□□□□□ -0.64
LINC01554Q52M75 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01554Q52M75 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01554Q52M75 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01554Q52M75 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
LINC01554Q52M75 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01554Q52M75 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01554Q52M75 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01554Q52M75 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01554Q52M75 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01554Q52M75 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
LINC01554Q52M75 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01554Q52M75 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01554Q52M75 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01554Q52M75 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
LINC01554Q52M75 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
LINC01554Q52M75 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01554Q52M75 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01554Q52M75 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC11.04□□□□□ -0.64
LINC01554Q52M75 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01554Q52M75 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01554Q52M75 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC01554Q52M75 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
LINC01554Q52M75 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms