Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TBC1D28Q2M2D7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.23■□□□□ 0.67
TBC1D28Q2M2D7 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.23■□□□□ 0.67
TBC1D28Q2M2D7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.23■□□□□ 0.67
TBC1D28Q2M2D7 AC096631.2-201ENST00000436136 790 ntBASIC19.23■□□□□ 0.67
TBC1D28Q2M2D7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.23■□□□□ 0.67
TBC1D28Q2M2D7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.23■□□□□ 0.67
TBC1D28Q2M2D7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TBC1D28Q2M2D7 AC133637.1-201ENST00000624115 1537 ntBASIC19.23■□□□□ 0.67
TBC1D28Q2M2D7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.23■□□□□ 0.67
TBC1D28Q2M2D7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TBC1D28Q2M2D7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TBC1D28Q2M2D7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D28Q2M2D7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D28Q2M2D7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TBC1D28Q2M2D7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D28Q2M2D7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D28Q2M2D7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TBC1D28Q2M2D7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D28Q2M2D7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.22■□□□□ 0.67
TBC1D28Q2M2D7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
TBC1D28Q2M2D7 AC011298.3-201ENST00000615796 283 ntBASIC19.22■□□□□ 0.67
TBC1D28Q2M2D7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D28Q2M2D7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TBC1D28Q2M2D7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
TBC1D28Q2M2D7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D28Q2M2D7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D28Q2M2D7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.21■□□□□ 0.67
TBC1D28Q2M2D7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TBC1D28Q2M2D7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D28Q2M2D7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.21■□□□□ 0.67
TBC1D28Q2M2D7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.21■□□□□ 0.67
TBC1D28Q2M2D7 AL136162.1-201ENST00000607711 1078 ntBASIC19.21■□□□□ 0.67
TBC1D28Q2M2D7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.21■□□□□ 0.67
TBC1D28Q2M2D7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D28Q2M2D7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D28Q2M2D7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.21■□□□□ 0.67
TBC1D28Q2M2D7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TBC1D28Q2M2D7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D28Q2M2D7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D28Q2M2D7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TBC1D28Q2M2D7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D28Q2M2D7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D28Q2M2D7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D28Q2M2D7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D28Q2M2D7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D28Q2M2D7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.2■□□□□ 0.66
TBC1D28Q2M2D7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D28Q2M2D7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.2■□□□□ 0.66
TBC1D28Q2M2D7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D28Q2M2D7 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.2■□□□□ 0.66
TBC1D28Q2M2D7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
TBC1D28Q2M2D7 AC004687.1-201ENST00000579003 1625 ntBASIC19.2■□□□□ 0.66
TBC1D28Q2M2D7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D28Q2M2D7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D28Q2M2D7 AC135279.3-201ENST00000610945 1311 ntBASIC19.2■□□□□ 0.66
TBC1D28Q2M2D7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.2■□□□□ 0.66
TBC1D28Q2M2D7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TBC1D28Q2M2D7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TBC1D28Q2M2D7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TBC1D28Q2M2D7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
TBC1D28Q2M2D7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TBC1D28Q2M2D7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.19■□□□□ 0.66
TBC1D28Q2M2D7 AC136469.2-201ENST00000623944 1028 ntBASIC19.19■□□□□ 0.66
TBC1D28Q2M2D7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TBC1D28Q2M2D7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TBC1D28Q2M2D7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TBC1D28Q2M2D7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
TBC1D28Q2M2D7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.19■□□□□ 0.66
TBC1D28Q2M2D7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.19■□□□□ 0.66
TBC1D28Q2M2D7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TBC1D28Q2M2D7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.18■□□□□ 0.66
TBC1D28Q2M2D7 PBX2P1-201ENST00000493219 1291 ntBASIC19.18■□□□□ 0.66
TBC1D28Q2M2D7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TBC1D28Q2M2D7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.18■□□□□ 0.66
TBC1D28Q2M2D7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TBC1D28Q2M2D7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TBC1D28Q2M2D7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TBC1D28Q2M2D7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TBC1D28Q2M2D7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TBC1D28Q2M2D7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.17■□□□□ 0.66
TBC1D28Q2M2D7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TBC1D28Q2M2D7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TBC1D28Q2M2D7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.17■□□□□ 0.66
TBC1D28Q2M2D7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TBC1D28Q2M2D7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.17■□□□□ 0.66
TBC1D28Q2M2D7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.17■□□□□ 0.66
TBC1D28Q2M2D7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TBC1D28Q2M2D7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.17■□□□□ 0.66
TBC1D28Q2M2D7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TBC1D28Q2M2D7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.17■□□□□ 0.66
TBC1D28Q2M2D7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TBC1D28Q2M2D7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TBC1D28Q2M2D7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TBC1D28Q2M2D7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.16■□□□□ 0.66
TBC1D28Q2M2D7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.16■□□□□ 0.66
TBC1D28Q2M2D7 AC024257.2-201ENST00000549699 147 ntBASIC19.16■□□□□ 0.66
TBC1D28Q2M2D7 AL139246.5-201ENST00000606645 996 ntBASIC19.16■□□□□ 0.66
TBC1D28Q2M2D7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
TBC1D28Q2M2D7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms