Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
CLCN1P35523 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CLCN1P35523 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
CLCN1P35523 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CLCN1P35523 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CLCN1P35523 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CLCN1P35523 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC25.09■■□□□ 1.61
CLCN1P35523 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC25.09■■□□□ 1.61
CLCN1P35523 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CLCN1P35523 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CLCN1P35523 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CLCN1P35523 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CLCN1P35523 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CLCN1P35523 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CLCN1P35523 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CLCN1P35523 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CLCN1P35523 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CLCN1P35523 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CLCN1P35523 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CLCN1P35523 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CLCN1P35523 GCA-201ENST00000233612 1694 ntTSL 2 BASIC25.08■■□□□ 1.61
CLCN1P35523 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CLCN1P35523 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CLCN1P35523 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC25.08■■□□□ 1.61
CLCN1P35523 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.08■■□□□ 1.61
CLCN1P35523 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CLCN1P35523 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CLCN1P35523 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CLCN1P35523 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC25.07■■□□□ 1.6
CLCN1P35523 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
CLCN1P35523 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CLCN1P35523 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CLCN1P35523 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
CLCN1P35523 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
CLCN1P35523 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CLCN1P35523 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CLCN1P35523 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
CLCN1P35523 AC005229.4-201ENST00000610085 2198 ntBASIC25.07■■□□□ 1.6
CLCN1P35523 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC25.06■■□□□ 1.6
CLCN1P35523 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC25.06■■□□□ 1.6
CLCN1P35523 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CLCN1P35523 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC25.06■■□□□ 1.6
CLCN1P35523 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
CLCN1P35523 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CLCN1P35523 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CLCN1P35523 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CLCN1P35523 DUX4L18-201ENST00000553347 1267 ntBASIC25.06■■□□□ 1.6
CLCN1P35523 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.06■■□□□ 1.6
CLCN1P35523 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CLCN1P35523 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC25.06■■□□□ 1.6
CLCN1P35523 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC25.06■■□□□ 1.6
CLCN1P35523 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CLCN1P35523 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
CLCN1P35523 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CLCN1P35523 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
CLCN1P35523 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC25.05■■□□□ 1.6
CLCN1P35523 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CLCN1P35523 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
CLCN1P35523 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC25.05■■□□□ 1.6
CLCN1P35523 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.05■■□□□ 1.6
CLCN1P35523 LONRF2P2-201ENST00000439212 571 ntBASIC25.05■■□□□ 1.6
CLCN1P35523 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.05■■□□□ 1.6
CLCN1P35523 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC25.05■■□□□ 1.6
CLCN1P35523 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
CLCN1P35523 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CLCN1P35523 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
CLCN1P35523 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
CLCN1P35523 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC25.04■■□□□ 1.6
CLCN1P35523 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
CLCN1P35523 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CLCN1P35523 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CLCN1P35523 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CLCN1P35523 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
CLCN1P35523 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CLCN1P35523 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.04■■□□□ 1.6
CLCN1P35523 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CLCN1P35523 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.03■■□□□ 1.6
CLCN1P35523 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
CLCN1P35523 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
CLCN1P35523 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC25.03■■□□□ 1.6
CLCN1P35523 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CLCN1P35523 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CLCN1P35523 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.03■■□□□ 1.6
CLCN1P35523 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CLCN1P35523 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC25.03■■□□□ 1.6
CLCN1P35523 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CLCN1P35523 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.03■■□□□ 1.6
CLCN1P35523 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CLCN1P35523 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
CLCN1P35523 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CLCN1P35523 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CLCN1P35523 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CLCN1P35523 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CLCN1P35523 LINC01521-201ENST00000504184 1943 ntBASIC25.02■■□□□ 1.6
CLCN1P35523 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CLCN1P35523 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CLCN1P35523 AC004987.1-201ENST00000428627 508 ntBASIC25.02■■□□□ 1.6
CLCN1P35523 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CLCN1P35523 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CLCN1P35523 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms