Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 AL512631.2-201ENST00000604634 923 ntBASIC20.78■□□□□ 0.92
PLOD3O60568 AC241377.3-202ENST00000626088 1088 ntBASIC20.78■□□□□ 0.92
PLOD3O60568 AC241585.3-202ENST00000628937 1088 ntBASIC20.78■□□□□ 0.92
PLOD3O60568 AC245100.8-202ENST00000629247 1058 ntBASIC20.78■□□□□ 0.92
PLOD3O60568 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.78■□□□□ 0.92
PLOD3O60568 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.78■□□□□ 0.92
PLOD3O60568 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PLOD3O60568 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PLOD3O60568 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PLOD3O60568 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.77■□□□□ 0.92
PLOD3O60568 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PLOD3O60568 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PLOD3O60568 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.77■□□□□ 0.92
PLOD3O60568 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.77■□□□□ 0.92
PLOD3O60568 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.77■□□□□ 0.92
PLOD3O60568 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.77■□□□□ 0.92
PLOD3O60568 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PLOD3O60568 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.77■□□□□ 0.92
PLOD3O60568 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PLOD3O60568 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PLOD3O60568 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PLOD3O60568 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.76■□□□□ 0.91
PLOD3O60568 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PLOD3O60568 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
PLOD3O60568 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
PLOD3O60568 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PLOD3O60568 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
PLOD3O60568 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.76■□□□□ 0.91
PLOD3O60568 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.76■□□□□ 0.91
PLOD3O60568 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.76■□□□□ 0.91
PLOD3O60568 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.76■□□□□ 0.91
PLOD3O60568 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.76■□□□□ 0.91
PLOD3O60568 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PLOD3O60568 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PLOD3O60568 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.76■□□□□ 0.91
PLOD3O60568 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PLOD3O60568 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PLOD3O60568 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PLOD3O60568 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PLOD3O60568 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PLOD3O60568 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PLOD3O60568 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.75■□□□□ 0.91
PLOD3O60568 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.75■□□□□ 0.91
PLOD3O60568 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PLOD3O60568 AC009086.3-201ENST00000623486 1008 ntBASIC20.75■□□□□ 0.91
PLOD3O60568 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PLOD3O60568 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PLOD3O60568 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PLOD3O60568 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PLOD3O60568 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PLOD3O60568 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PLOD3O60568 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.74■□□□□ 0.91
PLOD3O60568 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PLOD3O60568 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PLOD3O60568 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.74■□□□□ 0.91
PLOD3O60568 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PLOD3O60568 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
PLOD3O60568 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PLOD3O60568 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PLOD3O60568 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PLOD3O60568 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.73■□□□□ 0.91
PLOD3O60568 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PLOD3O60568 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.73■□□□□ 0.91
PLOD3O60568 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.73■□□□□ 0.91
PLOD3O60568 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.73■□□□□ 0.91
PLOD3O60568 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PLOD3O60568 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
PLOD3O60568 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.73■□□□□ 0.91
PLOD3O60568 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PLOD3O60568 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
PLOD3O60568 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
PLOD3O60568 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.72■□□□□ 0.91
PLOD3O60568 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PLOD3O60568 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PLOD3O60568 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.72■□□□□ 0.91
PLOD3O60568 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PLOD3O60568 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.72■□□□□ 0.91
PLOD3O60568 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PLOD3O60568 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.72■□□□□ 0.91
PLOD3O60568 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PLOD3O60568 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PLOD3O60568 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PLOD3O60568 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PLOD3O60568 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
PLOD3O60568 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PLOD3O60568 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PLOD3O60568 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PLOD3O60568 SRD5A1P1-201ENST00000442297 786 ntBASIC20.71■□□□□ 0.91
PLOD3O60568 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PLOD3O60568 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.71■□□□□ 0.91
PLOD3O60568 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.71■□□□□ 0.91
PLOD3O60568 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PLOD3O60568 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PLOD3O60568 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.71■□□□□ 0.91
PLOD3O60568 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.71■□□□□ 0.91
PLOD3O60568 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PLOD3O60568 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PLOD3O60568 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
PLOD3O60568 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PLOD3O60568 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms