Protein–RNA interactions for Protein: O43759

SYNGR1, Synaptogyrin-1, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1O43759 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYNGR1O43759 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SYNGR1O43759 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYNGR1O43759 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.8■□□□□ 0.6
SYNGR1O43759 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SYNGR1O43759 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYNGR1O43759 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYNGR1O43759 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYNGR1O43759 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYNGR1O43759 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SYNGR1O43759 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.8■□□□□ 0.6
SYNGR1O43759 AL117332.1-201ENST00000622628 974 ntBASIC18.8■□□□□ 0.6
SYNGR1O43759 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYNGR1O43759 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYNGR1O43759 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYNGR1O43759 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
SYNGR1O43759 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.8■□□□□ 0.6
SYNGR1O43759 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYNGR1O43759 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYNGR1O43759 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SYNGR1O43759 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SYNGR1O43759 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.8■□□□□ 0.6
SYNGR1O43759 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SYNGR1O43759 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SYNGR1O43759 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SYNGR1O43759 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNGR1O43759 GUSBP5-202ENST00000510805 1989 ntBASIC18.79■□□□□ 0.6
SYNGR1O43759 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.79■□□□□ 0.6
SYNGR1O43759 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.79■□□□□ 0.6
SYNGR1O43759 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.79■□□□□ 0.6
SYNGR1O43759 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNGR1O43759 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.79■□□□□ 0.6
SYNGR1O43759 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SYNGR1O43759 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNGR1O43759 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.79■□□□□ 0.6
SYNGR1O43759 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SYNGR1O43759 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SYNGR1O43759 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.79■□□□□ 0.6
SYNGR1O43759 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SYNGR1O43759 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SYNGR1O43759 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNGR1O43759 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SYNGR1O43759 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNGR1O43759 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SYNGR1O43759 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNGR1O43759 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNGR1O43759 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNGR1O43759 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.78■□□□□ 0.6
SYNGR1O43759 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.78■□□□□ 0.6
SYNGR1O43759 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.78■□□□□ 0.6
SYNGR1O43759 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNGR1O43759 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNGR1O43759 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYNGR1O43759 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.77■□□□□ 0.6
SYNGR1O43759 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYNGR1O43759 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SYNGR1O43759 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
SYNGR1O43759 AC079834.2-201ENST00000609776 1949 ntBASIC18.77■□□□□ 0.6
SYNGR1O43759 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
SYNGR1O43759 AL356740.2-201ENST00000601559 647 ntBASIC18.77■□□□□ 0.6
SYNGR1O43759 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.77■□□□□ 0.6
SYNGR1O43759 AC009086.3-201ENST00000623486 1008 ntBASIC18.77■□□□□ 0.6
SYNGR1O43759 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYNGR1O43759 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SYNGR1O43759 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SYNGR1O43759 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYNGR1O43759 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SYNGR1O43759 EP400NL-214ENST00000641289 2402 ntBASIC18.76■□□□□ 0.59
SYNGR1O43759 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SYNGR1O43759 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYNGR1O43759 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SYNGR1O43759 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.76■□□□□ 0.59
SYNGR1O43759 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SYNGR1O43759 ESRRAP2-201ENST00000418437 1549 ntBASIC18.76■□□□□ 0.59
SYNGR1O43759 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SYNGR1O43759 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SYNGR1O43759 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SYNGR1O43759 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYNGR1O43759 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.76■□□□□ 0.59
SYNGR1O43759 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYNGR1O43759 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SYNGR1O43759 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYNGR1O43759 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNGR1O43759 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SYNGR1O43759 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNGR1O43759 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SYNGR1O43759 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNGR1O43759 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNGR1O43759 AL356441.2-201ENST00000443009 864 ntBASIC18.75■□□□□ 0.59
SYNGR1O43759 MIR3621-201ENST00000580529 85 ntBASIC18.75■□□□□ 0.59
SYNGR1O43759 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNGR1O43759 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNGR1O43759 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SYNGR1O43759 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.75■□□□□ 0.59
SYNGR1O43759 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNGR1O43759 AC004687.1-201ENST00000579003 1625 ntBASIC18.74■□□□□ 0.59
SYNGR1O43759 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SYNGR1O43759 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNGR1O43759 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNGR1O43759 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms