Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 FAM21EP-201ENST00000417804 985 ntBASIC13.55□□□□□ -0.24
LYSMD3Q7Z3D4 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD3Q7Z3D4 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC13.55□□□□□ -0.24
LYSMD3Q7Z3D4 AC007688.1-201ENST00000475592 759 ntBASIC13.55□□□□□ -0.24
LYSMD3Q7Z3D4 HNRNPA1P56-201ENST00000505767 954 ntBASIC13.55□□□□□ -0.24
LYSMD3Q7Z3D4 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC13.55□□□□□ -0.24
LYSMD3Q7Z3D4 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC13.55□□□□□ -0.24
LYSMD3Q7Z3D4 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
LYSMD3Q7Z3D4 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC13.55□□□□□ -0.24
LYSMD3Q7Z3D4 METTL7AP1-201ENST00000547343 496 ntBASIC13.55□□□□□ -0.24
LYSMD3Q7Z3D4 MT2A-202ENST00000561491 581 ntTSL 2 BASIC13.55□□□□□ -0.24
LYSMD3Q7Z3D4 AL136370.1-201ENST00000608166 691 ntBASIC13.55□□□□□ -0.24
LYSMD3Q7Z3D4 CSTP2-201ENST00000610599 398 ntBASIC13.55□□□□□ -0.24
LYSMD3Q7Z3D4 AC138466.5-201ENST00000624002 808 ntBASIC13.55□□□□□ -0.24
LYSMD3Q7Z3D4 HLA-C-210ENST00000640219 976 ntBASIC13.55□□□□□ -0.24
LYSMD3Q7Z3D4 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD3Q7Z3D4 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
LYSMD3Q7Z3D4 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD3Q7Z3D4 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD3Q7Z3D4 AC115284.2-201ENST00000624646 2054 ntBASIC13.55□□□□□ -0.24
LYSMD3Q7Z3D4 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD3Q7Z3D4 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD3Q7Z3D4 PCDHB19P-202ENST00000625133 2914 ntBASIC13.55□□□□□ -0.24
LYSMD3Q7Z3D4 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD3Q7Z3D4 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD3Q7Z3D4 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD3Q7Z3D4 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD3Q7Z3D4 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD3Q7Z3D4 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD3Q7Z3D4 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 TBC1D3P1-201ENST00000590047 1693 ntBASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 FTO-214ENST00000636218 2227 ntTSL 5 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 RHOC-205ENST00000369636 786 ntTSL 2 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 SERF2-204ENST00000402131 586 ntTSL 2 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 RPL10-203ENST00000406022 748 ntTSL 3 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 AC008026.2-201ENST00000495438 348 ntBASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 FOXN3-AS2-201ENST00000554071 1262 ntBASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 AC010976.2-201ENST00000609697 852 ntBASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 CA6-205ENST00000480186 1493 ntTSL 2 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD3Q7Z3D4 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 AC025271.4-201ENST00000621477 1726 ntBASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms