Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
NACAE9PAV3 RCBTB2-206ENST00000544904 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
NACAE9PAV3 ST6GAL1-215ENST00000457772 3947 ntTSL 5 BASIC9.96□□□□□ -0.81
NACAE9PAV3 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC9.96□□□□□ -0.81
NACAE9PAV3 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC9.96□□□□□ -0.81
NACAE9PAV3 UBXN4-201ENST00000272638 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
NACAE9PAV3 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC9.96□□□□□ -0.81
NACAE9PAV3 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC9.96□□□□□ -0.81
NACAE9PAV3 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC9.96□□□□□ -0.81
NACAE9PAV3 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
NACAE9PAV3 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
NACAE9PAV3 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
NACAE9PAV3 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
NACAE9PAV3 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
NACAE9PAV3 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
NACAE9PAV3 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
NACAE9PAV3 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
NACAE9PAV3 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC9.96□□□□□ -0.81
NACAE9PAV3 NAGK-204ENST00000443872 878 ntTSL 3 BASIC9.96□□□□□ -0.81
NACAE9PAV3 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC9.96□□□□□ -0.81
NACAE9PAV3 CHCHD2P2-201ENST00000503744 321 ntBASIC9.96□□□□□ -0.81
NACAE9PAV3 GOLGA2P8-201ENST00000505201 779 ntBASIC9.96□□□□□ -0.81
NACAE9PAV3 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC9.96□□□□□ -0.81
NACAE9PAV3 NEU3-205ENST00000531619 582 ntTSL 5 BASIC9.96□□□□□ -0.81
NACAE9PAV3 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC9.96□□□□□ -0.81
NACAE9PAV3 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC9.96□□□□□ -0.81
NACAE9PAV3 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC9.96□□□□□ -0.81
NACAE9PAV3 AC020922.3-201ENST00000595064 547 ntBASIC9.96□□□□□ -0.81
NACAE9PAV3 AL353726.2-201ENST00000623259 884 ntBASIC9.96□□□□□ -0.81
NACAE9PAV3 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.81
NACAE9PAV3 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC9.96□□□□□ -0.81
NACAE9PAV3 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
NACAE9PAV3 GTF2I-218ENST00000620879 4352 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.82
NACAE9PAV3 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
NACAE9PAV3 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
NACAE9PAV3 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC9.96□□□□□ -0.82
NACAE9PAV3 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
NACAE9PAV3 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC9.96□□□□□ -0.82
NACAE9PAV3 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
NACAE9PAV3 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
NACAE9PAV3 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
NACAE9PAV3 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
NACAE9PAV3 AC009474.1-201ENST00000455096 1565 ntBASIC9.96□□□□□ -0.82
NACAE9PAV3 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC9.96□□□□□ -0.82
NACAE9PAV3 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC9.96□□□□□ -0.82
NACAE9PAV3 AL355102.3-201ENST00000554299 1678 ntBASIC9.96□□□□□ -0.82
NACAE9PAV3 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
NACAE9PAV3 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC9.96□□□□□ -0.82
NACAE9PAV3 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
NACAE9PAV3 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC9.96□□□□□ -0.82
NACAE9PAV3 PCDHB11-201ENST00000354757 4198 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
NACAE9PAV3 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
NACAE9PAV3 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
NACAE9PAV3 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
NACAE9PAV3 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
NACAE9PAV3 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
NACAE9PAV3 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
NACAE9PAV3 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
NACAE9PAV3 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
NACAE9PAV3 SOD2-202ENST00000367054 815 ntTSL 2 BASIC9.95□□□□□ -0.82
NACAE9PAV3 OR2K2-202ENST00000374428 1038 ntBASIC9.95□□□□□ -0.82
NACAE9PAV3 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
NACAE9PAV3 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
NACAE9PAV3 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC9.95□□□□□ -0.82
NACAE9PAV3 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC9.95□□□□□ -0.82
NACAE9PAV3 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC9.95□□□□□ -0.82
NACAE9PAV3 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC9.95□□□□□ -0.82
NACAE9PAV3 FTH1P22-201ENST00000456305 520 ntBASIC9.95□□□□□ -0.82
NACAE9PAV3 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
NACAE9PAV3 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC9.95□□□□□ -0.82
NACAE9PAV3 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
NACAE9PAV3 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC9.95□□□□□ -0.82
NACAE9PAV3 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC9.95□□□□□ -0.82
NACAE9PAV3 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
NACAE9PAV3 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
NACAE9PAV3 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
NACAE9PAV3 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
NACAE9PAV3 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC9.95□□□□□ -0.82
NACAE9PAV3 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC9.95□□□□□ -0.82
NACAE9PAV3 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC9.95□□□□□ -0.82
NACAE9PAV3 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC9.95□□□□□ -0.82
NACAE9PAV3 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC9.95□□□□□ -0.82
NACAE9PAV3 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC9.95□□□□□ -0.82
NACAE9PAV3 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC9.95□□□□□ -0.82
NACAE9PAV3 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC9.95□□□□□ -0.82
NACAE9PAV3 AC009145.4-201ENST00000625119 1294 ntBASIC9.95□□□□□ -0.82
NACAE9PAV3 SNX1-214ENST00000625244 324 ntTSL 5 BASIC9.95□□□□□ -0.82
NACAE9PAV3 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC9.95□□□□□ -0.82
NACAE9PAV3 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC9.95□□□□□ -0.82
NACAE9PAV3 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
NACAE9PAV3 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
NACAE9PAV3 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
NACAE9PAV3 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
NACAE9PAV3 AC093462.1-201ENST00000621167 1683 ntBASIC9.95□□□□□ -0.82
NACAE9PAV3 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
NACAE9PAV3 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC9.95□□□□□ -0.82
NACAE9PAV3 TNRC6C-202ENST00000335749 9740 ntAPPRIS P4 TSL 5 BASIC9.95□□□□□ -0.82
NACAE9PAV3 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
NACAE9PAV3 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
NACAE9PAV3 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC9.95□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms