Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
ZC3H6P61129 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
ZC3H6P61129 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZC3H6P61129 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZC3H6P61129 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC17.69■□□□□ 0.42
ZC3H6P61129 SH3GLB2-206ENST00000417224 1468 ntTSL 5 BASIC17.69■□□□□ 0.42
ZC3H6P61129 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZC3H6P61129 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZC3H6P61129 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZC3H6P61129 LILRA5-201ENST00000432233 1363 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZC3H6P61129 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZC3H6P61129 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZC3H6P61129 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZC3H6P61129 IP6K2-221ENST00000449610 1673 ntTSL 2 BASIC17.68■□□□□ 0.42
ZC3H6P61129 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ZC3H6P61129 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZC3H6P61129 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC17.68■□□□□ 0.42
ZC3H6P61129 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
ZC3H6P61129 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ZC3H6P61129 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZC3H6P61129 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZC3H6P61129 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZC3H6P61129 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZC3H6P61129 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
ZC3H6P61129 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZC3H6P61129 SYCE3-201ENST00000402753 342 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZC3H6P61129 AC138392.1-201ENST00000427577 921 ntBASIC17.68■□□□□ 0.42
ZC3H6P61129 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZC3H6P61129 AL591368.1-201ENST00000437181 1449 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZC3H6P61129 ASS1P9-201ENST00000513426 1236 ntBASIC17.68■□□□□ 0.42
ZC3H6P61129 IDH3A-207ENST00000558554 1595 ntTSL 2 BASIC17.68■□□□□ 0.42
ZC3H6P61129 AP005264.6-203ENST00000586882 1050 ntTSL 5 BASIC17.68■□□□□ 0.42
ZC3H6P61129 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ZC3H6P61129 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC17.68■□□□□ 0.42
ZC3H6P61129 AL158032.2-201ENST00000616818 195 ntBASIC17.68■□□□□ 0.42
ZC3H6P61129 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
ZC3H6P61129 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.68■□□□□ 0.42
ZC3H6P61129 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZC3H6P61129 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZC3H6P61129 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC17.68■□□□□ 0.42
ZC3H6P61129 BEND3P1-201ENST00000421591 1944 ntBASIC17.68■□□□□ 0.42
ZC3H6P61129 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC17.68■□□□□ 0.42
ZC3H6P61129 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZC3H6P61129 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZC3H6P61129 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZC3H6P61129 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZC3H6P61129 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.68■□□□□ 0.42
ZC3H6P61129 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.68■□□□□ 0.42
ZC3H6P61129 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZC3H6P61129 MIPEPP1-201ENST00000413533 2027 ntBASIC17.67■□□□□ 0.42
ZC3H6P61129 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZC3H6P61129 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZC3H6P61129 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
ZC3H6P61129 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZC3H6P61129 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZC3H6P61129 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC17.67■□□□□ 0.42
ZC3H6P61129 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZC3H6P61129 COX4I2-201ENST00000376075 693 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZC3H6P61129 HNRNPA1P59-201ENST00000430583 918 ntBASIC17.67■□□□□ 0.42
ZC3H6P61129 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC17.67■□□□□ 0.42
ZC3H6P61129 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZC3H6P61129 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC17.67■□□□□ 0.42
ZC3H6P61129 MIR4763-201ENST00000581461 92 ntBASIC17.67■□□□□ 0.42
ZC3H6P61129 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
ZC3H6P61129 RPS9-213ENST00000626547 476 ntTSL 2 BASIC17.67■□□□□ 0.42
ZC3H6P61129 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZC3H6P61129 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZC3H6P61129 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
ZC3H6P61129 ST3GAL3-202ENST00000330208 1479 ntTSL 5 BASIC17.67■□□□□ 0.42
ZC3H6P61129 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZC3H6P61129 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZC3H6P61129 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZC3H6P61129 AC099689.1-201ENST00000624383 1302 ntBASIC17.67■□□□□ 0.42
ZC3H6P61129 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
ZC3H6P61129 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ZC3H6P61129 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZC3H6P61129 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZC3H6P61129 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
ZC3H6P61129 AC244154.1-201ENST00000620148 1555 ntBASIC17.66■□□□□ 0.42
ZC3H6P61129 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ZC3H6P61129 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC17.66■□□□□ 0.42
ZC3H6P61129 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.66■□□□□ 0.42
ZC3H6P61129 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ZC3H6P61129 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H6P61129 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
ZC3H6P61129 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H6P61129 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H6P61129 CDCA7L-202ENST00000373934 1830 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
ZC3H6P61129 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H6P61129 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H6P61129 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC17.66■□□□□ 0.42
ZC3H6P61129 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC17.66■□□□□ 0.42
ZC3H6P61129 AL078621.2-201ENST00000419351 698 ntBASIC17.66■□□□□ 0.42
ZC3H6P61129 HNRNPA1P33-201ENST00000421426 561 ntBASIC17.66■□□□□ 0.42
ZC3H6P61129 ZNF662-202ENST00000422021 436 ntTSL 2 BASIC17.66■□□□□ 0.42
ZC3H6P61129 FTLP3-201ENST00000427242 528 ntBASIC17.66■□□□□ 0.42
ZC3H6P61129 RN7SL363P-201ENST00000482412 273 ntBASIC17.66■□□□□ 0.42
ZC3H6P61129 RN7SL87P-201ENST00000497657 288 ntBASIC17.66■□□□□ 0.42
ZC3H6P61129 AC092284.1-201ENST00000511386 1289 ntBASIC17.66■□□□□ 0.42
ZC3H6P61129 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms