RNA–Protein interactions for RNA: ENST00000620651.4

MKL1-213, Transcript of MKL/myocardin-like protein 1, humanhuman

TSL 5 BASIC

Gene MKL1, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKL1-213ENST00000620651 NISCHQ9Y2I1 1504 aa28.22■■■□□ 2.11
MKL1-213ENST00000620651 DCAF8L2P0C7V8 631 aa25.84■■□□□ 1.73
MKL1-213ENST00000620651 SHROOM4Q9ULL8 1493 aa24.57■■□□□ 1.52
MKL1-213ENST00000620651 ABCC9O60706 1549 aa24.47■■□□□ 1.51
MKL1-213ENST00000620651 CCDC180Q9P1Z9 1646 aa24.03■■□□□ 1.44
MKL1-213ENST00000620651 SUPT5HO00267 1087 aaKnown RBP23.86■■□□□ 1.41
MKL1-213ENST00000620651 PABPN1Q86U42 306 aaKnown RBP eCLIP23.55■■□□□ 1.36
MKL1-213ENST00000620651 ZCCHC6Q5VYS8 1495 aaKnown RBP23.46■■□□□ 1.35
MKL1-213ENST00000620651 SCRIBQ14160 1630 aa23.12■■□□□ 1.29
MKL1-213ENST00000620651 RB1CC1Q8TDY2 1594 aa23■■□□□ 1.27
MKL1-213ENST00000620651 NACADO15069 1562 aa22.91■■□□□ 1.26
MKL1-213ENST00000620651 DCAF1Q9Y4B6 1507 aa22.69■■□□□ 1.22
MKL1-213ENST00000620651 EHMT2Q96KQ7 1210 aa22.51■■□□□ 1.19
MKL1-213ENST00000620651 MYO15BQ96JP2 1530 aa22.4■■□□□ 1.18
MKL1-213ENST00000620651 FAM9AQ8IZU1 332 aaPredicted RBP22.3■■□□□ 1.16
MKL1-213ENST00000620651 CECR2Q9BXF3 1484 aa22.29■■□□□ 1.16
MKL1-213ENST00000620651 TRIM41Q8WV44 630 aa22.14■■□□□ 1.14
MKL1-213ENST00000620651 RSF1Q96T23 1441 aaPredicted RBP22.08■■□□□ 1.13
MKL1-213ENST00000620651 MROH2BQ7Z745 1585 aa21.95■■□□□ 1.1
MKL1-213ENST00000620651 BAZ1AQ9NRL2 1556 aaPredicted RBP21.9■■□□□ 1.1
MKL1-213ENST00000620651 RANGAP1P46060 587 aaPredicted RBP21.85■■□□□ 1.09
MKL1-213ENST00000620651 CHIC1Q5VXU3 224 aa21.84■■□□□ 1.09
MKL1-213ENST00000620651 BAZ1BQ9UIG0 1483 aaKnown RBP21.82■■□□□ 1.08
MKL1-213ENST00000620651 BICRAQ9NZM4 1560 aa21.79■■□□□ 1.08
MKL1-213ENST00000620651 UNC13AQ9UPW8 1703 aa21.71■■□□□ 1.07
MKL1-213ENST00000620651 WIZO95785 1651 aa21.68■■□□□ 1.06
MKL1-213ENST00000620651 DNAJC5BQ9UF47 199 aa21.66■■□□□ 1.06
MKL1-213ENST00000620651 SMARCA4P51532 1647 aa21.62■■□□□ 1.05
MKL1-213ENST00000620651 EIF4G1Q04637 1599 aaKnown RBP21.6■■□□□ 1.05
MKL1-213ENST00000620651 ATAD2BQ9ULI0 1458 aa21.6■■□□□ 1.05
MKL1-213ENST00000620651 UBTFP17480 764 aaKnown RBP21.57■■□□□ 1.04
MKL1-213ENST00000620651 SMARCA2P51531 1590 aa21.52■■□□□ 1.04
MKL1-213ENST00000620651 LOC105371045A0A1W2PR82 267 aa21.49■■□□□ 1.03
MKL1-213ENST00000620651 CCDC88BA6NC98 1476 aa21.44■■□□□ 1.02
MKL1-213ENST00000620651 TTBK1Q5TCY1 1321 aaPredicted RBP21.42■■□□□ 1.02
MKL1-213ENST00000620651 CC2D2AQ9P2K1 1620 aa21.39■■□□□ 1.01
MKL1-213ENST00000620651 FBLN2P98095 1184 aa21.35■■□□□ 1.01
MKL1-213ENST00000620651 ATP1B4Q9UN42 357 aaPredicted RBP21.32■■□□□ 1
MKL1-213ENST00000620651 TOP2AP11388 1531 aaKnown RBP21.32■■□□□ 1
MKL1-213ENST00000620651 NCAPD3P42695 1498 aa21.27■■□□□ 1
MKL1-213ENST00000620651 ERCC6Q03468 1493 aa21.27■■□□□ 1
MKL1-213ENST00000620651 CADPSQ9ULU8 1353 aa21.18■□□□□ 0.98
MKL1-213ENST00000620651 APLP2Q06481 763 aa21.15■□□□□ 0.98
MKL1-213ENST00000620651 PPARGC1BQ86YN6 1023 aaKnown RBP21.14■□□□□ 0.98
MKL1-213ENST00000620651 WRNQ14191 1432 aaPredicted RBP eCLIP21.14■□□□□ 0.97
MKL1-213ENST00000620651 ABCC8Q09428 1581 aa21.1■□□□□ 0.97
MKL1-213ENST00000620651 NESP48681 1621 aa21.09■□□□□ 0.97
MKL1-213ENST00000620651 CSRNP3Q8WYN3 585 aa21.09■□□□□ 0.97
MKL1-213ENST00000620651 PDS5BQ9NTI5 1447 aa21.04■□□□□ 0.96
MKL1-213ENST00000620651 P3H3Q8IVL6 736 aa20.96■□□□□ 0.95
MKL1-213ENST00000620651 HMGXB3Q12766 1538 aa20.96■□□□□ 0.95
MKL1-213ENST00000620651 FANCD2Q9BXW9 1451 aa20.94■□□□□ 0.94
MKL1-213ENST00000620651 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.92■□□□□ 0.94
MKL1-213ENST00000620651 HNRNPUL2Q1KMD3 747 aaKnown RBP20.92■□□□□ 0.94
MKL1-213ENST00000620651 CEP164Q9UPV0 1460 aa20.87■□□□□ 0.93
MKL1-213ENST00000620651 TDRD9Q8NDG6 1382 aaKnown RBP20.86■□□□□ 0.93
MKL1-213ENST00000620651 CHMP7Q8WUX9 453 aaPredicted RBP20.85■□□□□ 0.93
MKL1-213ENST00000620651 SOGA1O94964 1423 aa20.83■□□□□ 0.93
MKL1-213ENST00000620651 ARID3CA6NKF2 412 aa20.83■□□□□ 0.92
MKL1-213ENST00000620651 PEG3Q9GZU2 1588 aa20.81■□□□□ 0.92
MKL1-213ENST00000620651 CFTRP13569 1480 aa20.79■□□□□ 0.92
MKL1-213ENST00000620651 CUX2O14529 1486 aa20.78■□□□□ 0.92
MKL1-213ENST00000620651 KIF27Q86VH2 1401 aa20.72■□□□□ 0.91
MKL1-213ENST00000620651 PCGF6Q9BYE7 350 aa20.69■□□□□ 0.9
MKL1-213ENST00000620651 RAD54L2Q9Y4B4 1467 aa20.65■□□□□ 0.9
MKL1-213ENST00000620651 RUSC2Q8N2Y8 1516 aa20.62■□□□□ 0.89
MKL1-213ENST00000620651 FGD5Q6ZNL6 1462 aa20.59■□□□□ 0.89
MKL1-213ENST00000620651 ITGAEP38570 1179 aa20.56■□□□□ 0.88
MKL1-213ENST00000620651 CARMIL1Q5VZK9 1371 aa20.54■□□□□ 0.88
MKL1-213ENST00000620651 LAMC3Q9Y6N6 1575 aa20.5■□□□□ 0.87
MKL1-213ENST00000620651 AQRO60306 1485 aaKnown RBP eCLIP20.5■□□□□ 0.874e-6■□□□□ 10.8
MKL1-213ENST00000620651 SYNJ1O43426 1573 aa20.5■□□□□ 0.87
MKL1-213ENST00000620651 EEA1Q15075 1411 aa20.48■□□□□ 0.87
MKL1-213ENST00000620651 CUX1P39880 1505 aa20.46■□□□□ 0.87
MKL1-213ENST00000620651 TOPBP1Q92547 1522 aa20.46■□□□□ 0.87
MKL1-213ENST00000620651 MRC2Q9UBG0 1479 aa20.46■□□□□ 0.87
MKL1-213ENST00000620651 GOLGA3Q08378 1498 aa20.41■□□□□ 0.86
MKL1-213ENST00000620651 POLA1P09884 1462 aaPredicted RBP20.4■□□□□ 0.86
MKL1-213ENST00000620651 MYT1LQ9UL68 1186 aa20.37■□□□□ 0.85
MKL1-213ENST00000620651 URB2Q14146 1524 aaKnown RBP20.36■□□□□ 0.85
MKL1-213ENST00000620651 CLIP1P30622 1438 aa20.36■□□□□ 0.85
MKL1-213ENST00000620651 GAPVD1Q14C86 1478 aa20.35■□□□□ 0.85
MKL1-213ENST00000620651 IGF1RP08069 1367 aa20.32■□□□□ 0.84
MKL1-213ENST00000620651 CEP162Q5TB80 1403 aa20.31■□□□□ 0.84
MKL1-213ENST00000620651 RAPGEF2Q9Y4G8 1499 aa20.31■□□□□ 0.84
MKL1-213ENST00000620651 DNMBPQ6XZF7 1577 aa20.28■□□□□ 0.84
MKL1-213ENST00000620651 FAM50AQ14320 339 aaKnown RBP20.28■□□□□ 0.84
MKL1-213ENST00000620651 TOP2BQ02880 1626 aa20.26■□□□□ 0.83
MKL1-213ENST00000620651 TNIKQ9UKE5 1360 aa20.24■□□□□ 0.83
MKL1-213ENST00000620651 ZNF608Q9ULD9 1512 aaPredicted RBP20.22■□□□□ 0.83
MKL1-213ENST00000620651 NPM1P06748 294 aaKnown RBP eCLIP20.21■□□□□ 0.83
MKL1-213ENST00000620651 KIF21AQ7Z4S6 1674 aa20.21■□□□□ 0.83
MKL1-213ENST00000620651 ZNF777Q9ULD5 760 aaPredicted RBP20.2■□□□□ 0.82
MKL1-213ENST00000620651 TRIM26Q12899 539 aaPredicted RBP20.19■□□□□ 0.82
MKL1-213ENST00000620651 IFT140Q96RY7 1462 aa20.19■□□□□ 0.82
MKL1-213ENST00000620651 JPH4Q96JJ6 628 aa20.18■□□□□ 0.82
MKL1-213ENST00000620651 KCNH8Q96L42 1107 aa20.18■□□□□ 0.82
MKL1-213ENST00000620651 OSCARQ8IYS5 282 aa20.15■□□□□ 0.82
MKL1-213ENST00000620651 GRIN2BQ13224 1484 aa20.13■□□□□ 0.81
MKL1-213ENST00000620651 CDK11AQ9UQ88 783 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms