Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC073957.3-201ENST00000609998 6758 ntBASIC11.43□□□□□ -0.58
CD74P04233 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC11.43□□□□□ -0.58
CD74P04233 AL357054.4-201ENST00000606285 2814 ntBASIC11.43□□□□□ -0.58
CD74P04233 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC11.43□□□□□ -0.58
CD74P04233 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC11.43□□□□□ -0.58
CD74P04233 NT5C3A-214ENST00000620705 1704 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 FGF23-201ENST00000237837 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 PHLPP2-204ENST00000567016 4812 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
CD74P04233 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
CD74P04233 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC11.43□□□□□ -0.58
CD74P04233 CHST4-202ENST00000539698 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CD74P04233 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC11.43□□□□□ -0.58
CD74P04233 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD74P04233 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD74P04233 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD74P04233 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD74P04233 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD74P04233 LILRA6-203ENST00000396365 1890 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD74P04233 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD74P04233 SHROOM2P1-201ENST00000434773 2384 ntBASIC11.42□□□□□ -0.58
CD74P04233 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC11.42□□□□□ -0.58
CD74P04233 HYLS1-202ENST00000425380 2061 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
CD74P04233 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CD74P04233 MMP19-206ENST00000548629 1813 ntTSL 5 BASIC11.42□□□□□ -0.58
CD74P04233 PTN-202ENST00000393083 1599 ntTSL 5 BASIC11.42□□□□□ -0.58
CD74P04233 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC11.42□□□□□ -0.58
CD74P04233 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC11.42□□□□□ -0.58
CD74P04233 DGKZP1-201ENST00000378718 2776 ntBASIC11.42□□□□□ -0.58
CD74P04233 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC11.42□□□□□ -0.58
CD74P04233 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD74P04233 PPARG-206ENST00000397012 2006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD74P04233 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC11.42□□□□□ -0.58
CD74P04233 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD74P04233 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD74P04233 MRO-203ENST00000428869 1966 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
CD74P04233 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD74P04233 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD74P04233 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
CD74P04233 AL627231.1-201ENST00000394467 1125 ntBASIC11.42□□□□□ -0.58
CD74P04233 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CD74P04233 RPS9P1-201ENST00000419943 583 ntBASIC11.42□□□□□ -0.58
CD74P04233 OR8T1P-201ENST00000421347 918 ntBASIC11.42□□□□□ -0.58
CD74P04233 TSPY25P-201ENST00000429463 745 ntBASIC11.42□□□□□ -0.58
CD74P04233 AC078875.1-201ENST00000431907 724 ntBASIC11.42□□□□□ -0.58
CD74P04233 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC11.42□□□□□ -0.58
CD74P04233 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC11.42□□□□□ -0.58
CD74P04233 RPL18P13-201ENST00000478088 569 ntBASIC11.42□□□□□ -0.58
CD74P04233 COQ10BP2-201ENST00000513804 724 ntBASIC11.42□□□□□ -0.58
CD74P04233 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC11.42□□□□□ -0.58
CD74P04233 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CD74P04233 RNF41-210ENST00000552244 716 ntTSL 3 BASIC11.42□□□□□ -0.58
CD74P04233 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC11.42□□□□□ -0.58
CD74P04233 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC11.42□□□□□ -0.58
CD74P04233 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC11.42□□□□□ -0.58
CD74P04233 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC11.42□□□□□ -0.58
CD74P04233 AL022334.2-201ENST00000610000 484 ntBASIC11.42□□□□□ -0.58
CD74P04233 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD74P04233 Z82244.1-201ENST00000631502 840 ntBASIC11.42□□□□□ -0.58
CD74P04233 TRPC7-203ENST00000502753 2424 ntTSL 5 BASIC11.42□□□□□ -0.58
CD74P04233 AC008806.1-201ENST00000624962 2443 ntBASIC11.42□□□□□ -0.58
CD74P04233 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD74P04233 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD74P04233 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD74P04233 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD74P04233 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CD74P04233 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD74P04233 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
CD74P04233 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD74P04233 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD74P04233 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD74P04233 SNX10-201ENST00000338523 2546 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CD74P04233 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC11.42□□□□□ -0.58
CD74P04233 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC11.42□□□□□ -0.58
CD74P04233 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CD74P04233 DDC-206ENST00000431062 1620 ntTSL 5 BASIC11.42□□□□□ -0.58
CD74P04233 LINC01987-201ENST00000593118 2281 ntTSL 2 BASIC11.42□□□□□ -0.58
CD74P04233 AC005696.4-201ENST00000614400 3147 ntBASIC11.42□□□□□ -0.58
CD74P04233 DBIL5P-203ENST00000536214 2677 ntBASIC11.42□□□□□ -0.58
CD74P04233 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC11.42□□□□□ -0.58
CD74P04233 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD74P04233 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
CD74P04233 MYO19-203ENST00000610930 3271 ntTSL 5 BASIC11.41□□□□□ -0.58
CD74P04233 TBC1D27-202ENST00000424239 1573 ntBASIC11.41□□□□□ -0.58
CD74P04233 LILRB3-203ENST00000391750 2848 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
CD74P04233 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
CD74P04233 AP000229.1-201ENST00000608591 1979 ntTSL 4 BASIC11.41□□□□□ -0.58
CD74P04233 SUCLG2-201ENST00000307227 2352 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD74P04233 ZNF461-201ENST00000360357 2361 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
CD74P04233 CACNB3-204ENST00000547230 2395 ntTSL 3 BASIC11.41□□□□□ -0.58
CD74P04233 CICP19-201ENST00000632944 2357 ntBASIC11.41□□□□□ -0.58
CD74P04233 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD74P04233 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CD74P04233 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms