RNA–Protein interactions for RNA: ENST00000547230.5

CACNB3-204, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3 BASIC

Gene CACNB3, Length 2,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-204ENST00000547230 NISCHQ9Y2I1 1504 aa25.53■■□□□ 1.68
CACNB3-204ENST00000547230 SHROOM4Q9ULL8 1493 aa22.03■■□□□ 1.12
CACNB3-204ENST00000547230 SUPT5HO00267 1087 aaKnown RBP21.71■■□□□ 1.07
CACNB3-204ENST00000547230 ZCCHC6Q5VYS8 1495 aaKnown RBP21.68■■□□□ 1.06
CACNB3-204ENST00000547230 CCDC180Q9P1Z9 1646 aa21.57■■□□□ 1.04
CACNB3-204ENST00000547230 MYO15BQ96JP2 1530 aa21.37■■□□□ 1.01
CACNB3-204ENST00000547230 CHIC1Q5VXU3 224 aa21.27■■□□□ 1
CACNB3-204ENST00000547230 HRCP23327 699 aa21.17■□□□□ 0.98
CACNB3-204ENST00000547230 DCAF8L2P0C7V8 631 aa21.03■□□□□ 0.96
CACNB3-204ENST00000547230 PCGF6Q9BYE7 350 aa20.93■□□□□ 0.94
CACNB3-204ENST00000547230 DCAF1Q9Y4B6 1507 aa20.92■□□□□ 0.94
CACNB3-204ENST00000547230 PPARGC1BQ86YN6 1023 aaKnown RBP20.72■□□□□ 0.91
CACNB3-204ENST00000547230 LOC105371045A0A1W2PR82 267 aa20.66■□□□□ 0.9
CACNB3-204ENST00000547230 ABCC9O60706 1549 aa20.55■□□□□ 0.88
CACNB3-204ENST00000547230 TRIM26Q12899 539 aaPredicted RBP20.43■□□□□ 0.86
CACNB3-204ENST00000547230 RSF1Q96T23 1441 aaPredicted RBP20.33■□□□□ 0.84
CACNB3-204ENST00000547230 SCRIBQ14160 1630 aa20.32■□□□□ 0.84
CACNB3-204ENST00000547230 RB1CC1Q8TDY2 1594 aa20.23■□□□□ 0.83
CACNB3-204ENST00000547230 TRIM41Q8WV44 630 aa20.16■□□□□ 0.82
CACNB3-204ENST00000547230 ZEB1P37275 1124 aaPredicted RBP20.1■□□□□ 0.81
CACNB3-204ENST00000547230 FAM9AQ8IZU1 332 aaPredicted RBP20.06■□□□□ 0.8
CACNB3-204ENST00000547230 CECR2Q9BXF3 1484 aa19.93■□□□□ 0.78
CACNB3-204ENST00000547230 EHMT2Q96KQ7 1210 aa19.91■□□□□ 0.78
CACNB3-204ENST00000547230 MROH2BQ7Z745 1585 aa19.9■□□□□ 0.78
CACNB3-204ENST00000547230 WIZO95785 1651 aa19.83■□□□□ 0.77
CACNB3-204ENST00000547230 NACADO15069 1562 aa19.83■□□□□ 0.77
CACNB3-204ENST00000547230 SCAF1Q9H7N4 1312 aaKnown RBP19.73■□□□□ 0.75
CACNB3-204ENST00000547230 EIF4G1Q04637 1599 aaKnown RBP19.73■□□□□ 0.75
CACNB3-204ENST00000547230 BAZ1AQ9NRL2 1556 aaPredicted RBP19.72■□□□□ 0.75
CACNB3-204ENST00000547230 PELP1Q8IZL8 1130 aaKnown RBP19.62■□□□□ 0.73
CACNB3-204ENST00000547230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.59■□□□□ 0.73
CACNB3-204ENST00000547230 CCER1Q8TC90 406 aaPredicted RBP19.53■□□□□ 0.72
CACNB3-204ENST00000547230 ABCC8Q09428 1581 aa19.5■□□□□ 0.71
CACNB3-204ENST00000547230 TOP2AP11388 1531 aaKnown RBP19.48■□□□□ 0.71
CACNB3-204ENST00000547230 CCDC88BA6NC98 1476 aa19.47■□□□□ 0.71
CACNB3-204ENST00000547230 WRNQ14191 1432 aaPredicted RBP eCLIP19.46■□□□□ 0.71
CACNB3-204ENST00000547230 CEP162Q5TB80 1403 aa19.41■□□□□ 0.7
CACNB3-204ENST00000547230 SMARCA4P51532 1647 aa19.41■□□□□ 0.7
CACNB3-204ENST00000547230 SMARCA2P51531 1590 aa19.41■□□□□ 0.7
CACNB3-204ENST00000547230 ACIN1Q9UKV3 1341 aaKnown RBP19.41■□□□□ 0.7
CACNB3-204ENST00000547230 NEUROD1Q13562 356 aa19.37■□□□□ 0.69
CACNB3-204ENST00000547230 TTBK1Q5TCY1 1321 aaPredicted RBP19.36■□□□□ 0.69
CACNB3-204ENST00000547230 SOGA1O94964 1423 aa19.35■□□□□ 0.69
CACNB3-204ENST00000547230 DIEXFQ68CQ4 756 aaKnown RBP19.33■□□□□ 0.69
CACNB3-204ENST00000547230 TNIKQ9UKE5 1360 aa19.32■□□□□ 0.68
CACNB3-204ENST00000547230 UNC13AQ9UPW8 1703 aa19.28■□□□□ 0.68
CACNB3-204ENST00000547230 RUSC2Q8N2Y8 1516 aa19.26■□□□□ 0.67
CACNB3-204ENST00000547230 EEA1Q15075 1411 aa19.25■□□□□ 0.67
CACNB3-204ENST00000547230 CSRNP3Q8WYN3 585 aa19.21■□□□□ 0.67
CACNB3-204ENST00000547230 CENPBP07199 599 aaPredicted RBP19.2■□□□□ 0.66
CACNB3-204ENST00000547230 GTF3C3Q9Y5Q9 886 aa19.2■□□□□ 0.66
CACNB3-204ENST00000547230 GOLGA3Q08378 1498 aa19.18■□□□□ 0.66
CACNB3-204ENST00000547230 UBTFP17480 764 aaKnown RBP19.17■□□□□ 0.66
CACNB3-204ENST00000547230 ZNF316A6NFI3 1004 aaPredicted RBP19.11■□□□□ 0.65
CACNB3-204ENST00000547230 KIF21BO75037 1637 aa19.04■□□□□ 0.64
CACNB3-204ENST00000547230 SYNJ1O43426 1573 aa19.03■□□□□ 0.64
CACNB3-204ENST00000547230 CEP164Q9UPV0 1460 aa19.03■□□□□ 0.64
CACNB3-204ENST00000547230 PEG3Q9GZU2 1588 aa18.99■□□□□ 0.63
CACNB3-204ENST00000547230 BICRAQ9NZM4 1560 aa18.97■□□□□ 0.63
CACNB3-204ENST00000547230 CLIP1P30622 1438 aa18.97■□□□□ 0.63
CACNB3-204ENST00000547230 HNRNPUL2Q1KMD3 747 aaKnown RBP18.96■□□□□ 0.63
CACNB3-204ENST00000547230 VPS8Q8N3P4 1428 aa18.93■□□□□ 0.62
CACNB3-204ENST00000547230 YTHDC1Q96MU7 727 aaKnown RBP18.92■□□□□ 0.62
CACNB3-204ENST00000547230 PABPN1Q86U42 306 aaKnown RBP eCLIP18.9■□□□□ 0.62
CACNB3-204ENST00000547230 MIER1Q8N108 512 aa18.9■□□□□ 0.62
CACNB3-204ENST00000547230 BAZ1BQ9UIG0 1483 aaKnown RBP18.89■□□□□ 0.61
CACNB3-204ENST00000547230 RAPGEF2Q9Y4G8 1499 aa18.87■□□□□ 0.61
CACNB3-204ENST00000547230 ATAD2BQ9ULI0 1458 aa18.79■□□□□ 0.6
CACNB3-204ENST00000547230 APLP2Q06481 763 aa18.77■□□□□ 0.6
CACNB3-204ENST00000547230 TOP2BQ02880 1626 aa18.74■□□□□ 0.59
CACNB3-204ENST00000547230 RANGAP1P46060 587 aaPredicted RBP18.74■□□□□ 0.59
CACNB3-204ENST00000547230 BIVM-ERCC5R4GMW8 1640 aa18.69■□□□□ 0.58
CACNB3-204ENST00000547230 MYT1Q01538 1121 aa18.68■□□□□ 0.58
CACNB3-204ENST00000547230 ARAP1Q96P48 1450 aa18.66■□□□□ 0.58
CACNB3-204ENST00000547230 DHX57Q6P158 1386 aaKnown RBP18.66■□□□□ 0.58
CACNB3-204ENST00000547230 ERICH3Q5RHP9 1530 aa18.66■□□□□ 0.58
CACNB3-204ENST00000547230 CLSPNQ9HAW4 1339 aa18.63■□□□□ 0.57
CACNB3-204ENST00000547230 PRXQ9BXM0 1461 aa18.63■□□□□ 0.57
CACNB3-204ENST00000547230 KANK4Q5T7N3 995 aaPredicted RBP18.57■□□□□ 0.56
CACNB3-204ENST00000547230 RRBP1Q9P2E9 1410 aaKnown RBP18.54■□□□□ 0.56
CACNB3-204ENST00000547230 CUX1P39880 1505 aa18.5■□□□□ 0.55
CACNB3-204ENST00000547230 CUX2O14529 1486 aa18.49■□□□□ 0.55
CACNB3-204ENST00000547230 KIF27Q86VH2 1401 aa18.44■□□□□ 0.54
CACNB3-204ENST00000547230 ARHGAP35Q9NRY4 1499 aa18.43■□□□□ 0.54
CACNB3-204ENST00000547230 SUPT16HQ9Y5B9 1047 aaKnown RBP18.42■□□□□ 0.54
CACNB3-204ENST00000547230 CCNB3Q8WWL7 1395 aa18.42■□□□□ 0.54
CACNB3-204ENST00000547230 HMGXB3Q12766 1538 aa18.4■□□□□ 0.54
CACNB3-204ENST00000547230 MAPKBP1O60336 1514 aa18.34■□□□□ 0.53
CACNB3-204ENST00000547230 NCAPD3P42695 1498 aa18.34■□□□□ 0.53
CACNB3-204ENST00000547230 ITGAEP38570 1179 aa18.33■□□□□ 0.53
CACNB3-204ENST00000547230 RAB3GAP2Q9H2M9 1393 aa18.31■□□□□ 0.52
CACNB3-204ENST00000547230 CFTRP13569 1480 aa18.31■□□□□ 0.52
CACNB3-204ENST00000547230 TIAM1Q13009 1591 aa18.3■□□□□ 0.52
CACNB3-204ENST00000547230 DNAJC5BQ9UF47 199 aa18.29■□□□□ 0.52
CACNB3-204ENST00000547230 MAP3K1Q13233 1512 aa18.25■□□□□ 0.51
CACNB3-204ENST00000547230 KCNH8Q96L42 1107 aa18.25■□□□□ 0.51
CACNB3-204ENST00000547230 PRDM2Q13029 1718 aa18.25■□□□□ 0.51
CACNB3-204ENST00000547230 IGF1RP08069 1367 aa18.21■□□□□ 0.51
CACNB3-204ENST00000547230 SETD5Q9C0A6 1442 aa18.21■□□□□ 0.51
CACNB3-204ENST00000547230 TSHZ2Q9NRE2 1034 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms