RNA–Protein interactions for RNA: ENST00000548629.5

MMP19-206, Transcript of matrix metallopeptidase 19, humanhuman

TSL 5 BASIC

Gene MMP19, Length 1,813 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-206ENST00000548629 NISCHQ9Y2I1 1504 aa27.11■■□□□ 1.93
MMP19-206ENST00000548629 CCDC180Q9P1Z9 1646 aa23.61■■□□□ 1.37
MMP19-206ENST00000548629 ABCC9O60706 1549 aa23.24■■□□□ 1.31
MMP19-206ENST00000548629 ZCCHC6Q5VYS8 1495 aaKnown RBP22.71■■□□□ 1.23
MMP19-206ENST00000548629 DCAF8L2P0C7V8 631 aa22.67■■□□□ 1.22
MMP19-206ENST00000548629 DCAF1Q9Y4B6 1507 aa22.43■■□□□ 1.18
MMP19-206ENST00000548629 SHROOM4Q9ULL8 1493 aa22.34■■□□□ 1.17
MMP19-206ENST00000548629 RB1CC1Q8TDY2 1594 aa22.26■■□□□ 1.15
MMP19-206ENST00000548629 MYO15BQ96JP2 1530 aa22.23■■□□□ 1.15
MMP19-206ENST00000548629 NACADO15069 1562 aa22.15■■□□□ 1.14
MMP19-206ENST00000548629 SUPT5HO00267 1087 aaKnown RBP21.91■■□□□ 1.1
MMP19-206ENST00000548629 SCRIBQ14160 1630 aa21.71■■□□□ 1.07
MMP19-206ENST00000548629 UNC13AQ9UPW8 1703 aa21.68■■□□□ 1.06
MMP19-206ENST00000548629 PABPN1Q86U42 306 aaKnown RBP eCLIP21.67■■□□□ 1.06
MMP19-206ENST00000548629 DNAJC5BQ9UF47 199 aa21.55■■□□□ 1.04
MMP19-206ENST00000548629 BICRAQ9NZM4 1560 aa21.51■■□□□ 1.03
MMP19-206ENST00000548629 CHIC1Q5VXU3 224 aa21.41■■□□□ 1.02
MMP19-206ENST00000548629 RSF1Q96T23 1441 aaPredicted RBP21.06■□□□□ 0.96
MMP19-206ENST00000548629 CECR2Q9BXF3 1484 aa21.05■□□□□ 0.96
MMP19-206ENST00000548629 EIF4G1Q04637 1599 aaKnown RBP21.01■□□□□ 0.95
MMP19-206ENST00000548629 CC2D2AQ9P2K1 1620 aa21■□□□□ 0.95
MMP19-206ENST00000548629 BAZ1AQ9NRL2 1556 aaPredicted RBP20.97■□□□□ 0.95
MMP19-206ENST00000548629 MROH2BQ7Z745 1585 aa20.9■□□□□ 0.94
MMP19-206ENST00000548629 SMARCA4P51532 1647 aa20.81■□□□□ 0.92
MMP19-206ENST00000548629 HRCP23327 699 aa20.69■□□□□ 0.9
MMP19-206ENST00000548629 WIZO95785 1651 aa20.68■□□□□ 0.9
MMP19-206ENST00000548629 TRIM41Q8WV44 630 aa20.59■□□□□ 0.89
MMP19-206ENST00000548629 ATAD2BQ9ULI0 1458 aa20.58■□□□□ 0.89
MMP19-206ENST00000548629 SMARCA2P51531 1590 aa20.58■□□□□ 0.89
MMP19-206ENST00000548629 PEG3Q9GZU2 1588 aa20.57■□□□□ 0.88
MMP19-206ENST00000548629 LOC105371045A0A1W2PR82 267 aa20.56■□□□□ 0.88
MMP19-206ENST00000548629 PCGF6Q9BYE7 350 aa20.56■□□□□ 0.88
MMP19-206ENST00000548629 TOP2AP11388 1531 aaKnown RBP20.52■□□□□ 0.88
MMP19-206ENST00000548629 BAZ1BQ9UIG0 1483 aaKnown RBP20.48■□□□□ 0.87
MMP19-206ENST00000548629 NCAPD3P42695 1498 aa20.46■□□□□ 0.87
MMP19-206ENST00000548629 TRIM26Q12899 539 aaPredicted RBP20.42■□□□□ 0.86
MMP19-206ENST00000548629 CCDC88BA6NC98 1476 aa20.36■□□□□ 0.85
MMP19-206ENST00000548629 HMGXB3Q12766 1538 aa20.34■□□□□ 0.85
MMP19-206ENST00000548629 FAM9AQ8IZU1 332 aaPredicted RBP20.16■□□□□ 0.82
MMP19-206ENST00000548629 ZEB1P37275 1124 aaPredicted RBP20.13■□□□□ 0.81
MMP19-206ENST00000548629 ERCC6Q03468 1493 aa20.11■□□□□ 0.81
MMP19-206ENST00000548629 EEA1Q15075 1411 aa20.07■□□□□ 0.8
MMP19-206ENST00000548629 ABCC8Q09428 1581 aa20.03■□□□□ 0.8
MMP19-206ENST00000548629 NESP48681 1621 aa19.99■□□□□ 0.79
MMP19-206ENST00000548629 CUX2O14529 1486 aa19.98■□□□□ 0.79
MMP19-206ENST00000548629 CADPSQ9ULU8 1353 aa19.97■□□□□ 0.79
MMP19-206ENST00000548629 CFTRP13569 1480 aa19.95■□□□□ 0.78
MMP19-206ENST00000548629 LAMC3Q9Y6N6 1575 aa19.95■□□□□ 0.78
MMP19-206ENST00000548629 PPARGC1BQ86YN6 1023 aaKnown RBP19.95■□□□□ 0.78
MMP19-206ENST00000548629 WRNQ14191 1432 aaPredicted RBP eCLIP19.91■□□□□ 0.78
MMP19-206ENST00000548629 PDS5BQ9NTI5 1447 aa19.86■□□□□ 0.77
MMP19-206ENST00000548629 TNIKQ9UKE5 1360 aa19.86■□□□□ 0.77
MMP19-206ENST00000548629 EHMT2Q96KQ7 1210 aa19.81■□□□□ 0.76
MMP19-206ENST00000548629 CEP162Q5TB80 1403 aa19.8■□□□□ 0.76
MMP19-206ENST00000548629 GOLGA3Q08378 1498 aa19.8■□□□□ 0.76
MMP19-206ENST00000548629 SOGA1O94964 1423 aa19.79■□□□□ 0.76
MMP19-206ENST00000548629 KIF21AQ7Z4S6 1674 aa19.76■□□□□ 0.75
MMP19-206ENST00000548629 CSRNP3Q8WYN3 585 aa19.76■□□□□ 0.75
MMP19-206ENST00000548629 THOC2Q8NI27 1593 aaKnown RBP19.75■□□□□ 0.75
MMP19-206ENST00000548629 KIF21BO75037 1637 aa19.75■□□□□ 0.75
MMP19-206ENST00000548629 SYNJ1O43426 1573 aa19.72■□□□□ 0.75
MMP19-206ENST00000548629 CEP164Q9UPV0 1460 aa19.71■□□□□ 0.75
MMP19-206ENST00000548629 DNAJC5Q9H3Z4 198 aa19.69■□□□□ 0.74
MMP19-206ENST00000548629 FANCD2Q9BXW9 1451 aa19.69■□□□□ 0.74
MMP19-206ENST00000548629 MRC2Q9UBG0 1479 aa19.64■□□□□ 0.73
MMP19-206ENST00000548629 PRDM2Q13029 1718 aa19.64■□□□□ 0.73
MMP19-206ENST00000548629 RUSC2Q8N2Y8 1516 aa19.64■□□□□ 0.73
MMP19-206ENST00000548629 TOP2BQ02880 1626 aa19.62■□□□□ 0.73
MMP19-206ENST00000548629 BIVM-ERCC5R4GMW8 1640 aa19.61■□□□□ 0.73
MMP19-206ENST00000548629 UBTFP17480 764 aaKnown RBP19.58■□□□□ 0.73
MMP19-206ENST00000548629 WDR62O43379 1518 aa19.56■□□□□ 0.72
MMP19-206ENST00000548629 CUX1P39880 1505 aa19.55■□□□□ 0.72
MMP19-206ENST00000548629 CCER1Q8TC90 406 aaPredicted RBP19.47■□□□□ 0.71
MMP19-206ENST00000548629 ERICH3Q5RHP9 1530 aa19.47■□□□□ 0.71
MMP19-206ENST00000548629 CLIP1P30622 1438 aa19.47■□□□□ 0.71
MMP19-206ENST00000548629 DNMBPQ6XZF7 1577 aa19.44■□□□□ 0.7
MMP19-206ENST00000548629 VPS8Q8N3P4 1428 aa19.43■□□□□ 0.7
MMP19-206ENST00000548629 TOPBP1Q92547 1522 aa19.43■□□□□ 0.7
MMP19-206ENST00000548629 FGD5Q6ZNL6 1462 aa19.4■□□□□ 0.7
MMP19-206ENST00000548629 URB2Q14146 1524 aaKnown RBP19.39■□□□□ 0.69
MMP19-206ENST00000548629 RAPGEF2Q9Y4G8 1499 aa19.39■□□□□ 0.69
MMP19-206ENST00000548629 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.38■□□□□ 0.69
MMP19-206ENST00000548629 KIF27Q86VH2 1401 aa19.38■□□□□ 0.69
MMP19-206ENST00000548629 PRXQ9BXM0 1461 aa19.33■□□□□ 0.69
MMP19-206ENST00000548629 POLA1P09884 1462 aaPredicted RBP19.32■□□□□ 0.68
MMP19-206ENST00000548629 APLP2Q06481 763 aa19.28■□□□□ 0.68
MMP19-206ENST00000548629 RAD54L2Q9Y4B4 1467 aa19.26■□□□□ 0.67
MMP19-206ENST00000548629 ABCA10Q8WWZ4 1543 aa19.25■□□□□ 0.67
MMP19-206ENST00000548629 TTBK1Q5TCY1 1321 aaPredicted RBP19.22■□□□□ 0.67
MMP19-206ENST00000548629 IFT140Q96RY7 1462 aa19.22■□□□□ 0.67
MMP19-206ENST00000548629 IGF1RP08069 1367 aa19.2■□□□□ 0.66
MMP19-206ENST00000548629 TDRD9Q8NDG6 1382 aaKnown RBP19.16■□□□□ 0.66
MMP19-206ENST00000548629 ARAP1Q96P48 1450 aa19.16■□□□□ 0.66
MMP19-206ENST00000548629 CARMIL1Q5VZK9 1371 aa19.13■□□□□ 0.65
MMP19-206ENST00000548629 OSCARQ8IYS5 282 aa19.13■□□□□ 0.65
MMP19-206ENST00000548629 ZNF608Q9ULD9 1512 aaPredicted RBP19.11■□□□□ 0.65
MMP19-206ENST00000548629 GAPVD1Q14C86 1478 aa19.1■□□□□ 0.65
MMP19-206ENST00000548629 TARBP1Q13395 1621 aaKnown RBP19.08■□□□□ 0.64
MMP19-206ENST00000548629 DIEXFQ68CQ4 756 aaKnown RBP19.06■□□□□ 0.64
MMP19-206ENST00000548629 CLSPNQ9HAW4 1339 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms