Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.23■□□□□ 0.99
AP4B1Q9Y6B7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP4B1Q9Y6B7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP4B1Q9Y6B7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
AP4B1Q9Y6B7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.22■□□□□ 0.99
AP4B1Q9Y6B7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.22■□□□□ 0.99
AP4B1Q9Y6B7 THA1P-201ENST00000590384 1145 ntBASIC21.22■□□□□ 0.99
AP4B1Q9Y6B7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.22■□□□□ 0.99
AP4B1Q9Y6B7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP4B1Q9Y6B7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP4B1Q9Y6B7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AP4B1Q9Y6B7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
AP4B1Q9Y6B7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
AP4B1Q9Y6B7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.21■□□□□ 0.99
AP4B1Q9Y6B7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
AP4B1Q9Y6B7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.21■□□□□ 0.99
AP4B1Q9Y6B7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
AP4B1Q9Y6B7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
AP4B1Q9Y6B7 AC120024.1-201ENST00000562672 995 ntBASIC21.21■□□□□ 0.99
AP4B1Q9Y6B7 AL451085.2-201ENST00000605085 799 ntBASIC21.21■□□□□ 0.99
AP4B1Q9Y6B7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.21■□□□□ 0.99
AP4B1Q9Y6B7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
AP4B1Q9Y6B7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
AP4B1Q9Y6B7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.21■□□□□ 0.99
AP4B1Q9Y6B7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
AP4B1Q9Y6B7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
AP4B1Q9Y6B7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
AP4B1Q9Y6B7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.2■□□□□ 0.99
AP4B1Q9Y6B7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
AP4B1Q9Y6B7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.2■□□□□ 0.98
AP4B1Q9Y6B7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.2■□□□□ 0.98
AP4B1Q9Y6B7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
AP4B1Q9Y6B7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP4B1Q9Y6B7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP4B1Q9Y6B7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
AP4B1Q9Y6B7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP4B1Q9Y6B7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP4B1Q9Y6B7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP4B1Q9Y6B7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.19■□□□□ 0.98
AP4B1Q9Y6B7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP4B1Q9Y6B7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
AP4B1Q9Y6B7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.19■□□□□ 0.98
AP4B1Q9Y6B7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP4B1Q9Y6B7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
AP4B1Q9Y6B7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP4B1Q9Y6B7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
AP4B1Q9Y6B7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP4B1Q9Y6B7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP4B1Q9Y6B7 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.18■□□□□ 0.98
AP4B1Q9Y6B7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP4B1Q9Y6B7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.18■□□□□ 0.98
AP4B1Q9Y6B7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP4B1Q9Y6B7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
AP4B1Q9Y6B7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP4B1Q9Y6B7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
AP4B1Q9Y6B7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.17■□□□□ 0.98
AP4B1Q9Y6B7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.17■□□□□ 0.98
AP4B1Q9Y6B7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP4B1Q9Y6B7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
AP4B1Q9Y6B7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP4B1Q9Y6B7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.17■□□□□ 0.98
AP4B1Q9Y6B7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
AP4B1Q9Y6B7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
AP4B1Q9Y6B7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
AP4B1Q9Y6B7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.17■□□□□ 0.98
AP4B1Q9Y6B7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.17■□□□□ 0.98
AP4B1Q9Y6B7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
AP4B1Q9Y6B7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.17■□□□□ 0.98
AP4B1Q9Y6B7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
AP4B1Q9Y6B7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
AP4B1Q9Y6B7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.17■□□□□ 0.98
AP4B1Q9Y6B7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
AP4B1Q9Y6B7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP4B1Q9Y6B7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.16■□□□□ 0.98
AP4B1Q9Y6B7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.16■□□□□ 0.98
AP4B1Q9Y6B7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP4B1Q9Y6B7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.16■□□□□ 0.98
AP4B1Q9Y6B7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
AP4B1Q9Y6B7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
AP4B1Q9Y6B7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP4B1Q9Y6B7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP4B1Q9Y6B7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.16■□□□□ 0.98
AP4B1Q9Y6B7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.16■□□□□ 0.98
AP4B1Q9Y6B7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP4B1Q9Y6B7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP4B1Q9Y6B7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
AP4B1Q9Y6B7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP4B1Q9Y6B7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP4B1Q9Y6B7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP4B1Q9Y6B7 ESRRAP2-201ENST00000418437 1549 ntBASIC21.15■□□□□ 0.98
AP4B1Q9Y6B7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.15■□□□□ 0.98
AP4B1Q9Y6B7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP4B1Q9Y6B7 AC009299.2-201ENST00000482477 511 ntBASIC21.15■□□□□ 0.98
AP4B1Q9Y6B7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP4B1Q9Y6B7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP4B1Q9Y6B7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.15■□□□□ 0.98
AP4B1Q9Y6B7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP4B1Q9Y6B7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
AP4B1Q9Y6B7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
AP4B1Q9Y6B7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms